BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00006174
         (995 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258741.1| uncharacterized protein LOC109835163 [Aspara...   491   e-171
ref|XP_017251133.1| PREDICTED: uncharacterized mitochondrial pro...   479   e-166
gb|AIC77183.1| polyprotein [Gossypium barbadense]                     476   e-154
gb|KOM27543.1| hypothetical protein LR48_Vigan437s000300 [Vigna ...   424   e-144
gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposo...   417   e-141
gb|KYP52389.1| Retrovirus-related Pol polyprotein from transposo...   410   e-138
gb|ABF81447.1| NBS type disease resistance protein [Populus tric...   424   e-138
gb|PRQ55986.1| putative RNA-directed DNA polymerase [Rosa chinen...   416   e-137
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   431   e-137
gb|KYP39799.1| Retrovirus-related Pol polyprotein from transposo...   407   e-137
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   428   e-136
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   427   e-136
gb|KYP73058.1| Retrovirus-related Pol polyprotein from transposo...   409   e-136
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         426   e-135
gb|KYP55970.1| Retrovirus-related Pol polyprotein from transposo...   402   e-135
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             423   e-134
gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposo...   414   e-134
gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposo...   417   e-133
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   418   e-132
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   418   e-132

>ref|XP_020258741.1| uncharacterized protein LOC109835163 [Asparagus officinalis]
          Length = 440

 Score =  491 bits (1263), Expect = e-171
 Identities = 237/263 (90%), Positives = 255/263 (96%)
 Frame = -1

Query: 791 AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPRAWNARIDAYFQKNGFQQ 612
           AFLNGYLEEEVYI+Q P YVMKNQEDKVYKLKK+LYGLKQAPRAWNARIDAYFQKNGFQQ
Sbjct: 6   AFLNGYLEEEVYIEQQPRYVMKNQEDKVYKLKKALYGLKQAPRAWNARIDAYFQKNGFQQ 65

Query: 611 SPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSMIKEFEMTDIGEMSYFLG 432
           SPYE+SLYTKKKDGDIMI+CLYVDDMIF GNNPK+FEEFKK+MIKEFEMTDIGE+SYFLG
Sbjct: 66  SPYEHSLYTKKKDGDIMIVCLYVDDMIFIGNNPKIFEEFKKNMIKEFEMTDIGEISYFLG 125

Query: 431 VEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKLKQDSPGSFVDPTLYKSL 252
           VEVSQSEKG FISQKKYAKEILQKFNM NCN VTTPAEVGVKL+++SPGSF+DPTLYKSL
Sbjct: 126 VEVSQSEKGIFISQKKYAKEILQKFNMSNCNPVTTPAEVGVKLRRESPGSFIDPTLYKSL 185

Query: 251 VGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYVRGNIDQGLFYTKCADPR 72
           VGSLRYLTITRPDI+FAVGLVSRY+E+PRQEHF+AAKRILRYVR +IDQGLFYT+CAD R
Sbjct: 186 VGSLRYLTITRPDIVFAVGLVSRYIEEPRQEHFKAAKRILRYVRASIDQGLFYTQCADSR 245

Query: 71  LVGYTDSDYGGDLDERKSTSGYM 3
           LVGYTDS+YGGDLDERKSTSGYM
Sbjct: 246 LVGYTDSNYGGDLDERKSTSGYM 268


>ref|XP_017251133.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Daucus carota subsp. sativus]
          Length = 447

 Score =  479 bits (1232), Expect = e-166
 Identities = 235/340 (69%), Positives = 272/340 (80%), Gaps = 10/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            PEG+K IGVKWVYKTKTNQDG+VEK+KARLVAKGY Q+ G+DY+EVFAPVAR        
Sbjct: 41   PEGHKSIGVKWVYKTKTNQDGEVEKYKARLVAKGYKQRYGIDYDEVFAPVARVDTIRLLT 100

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNGYLEEEVYI+QP GYV K QEDKVY+LKK+LYGLKQAPR
Sbjct: 101  AIAAQNEWKIFQMDVKSAFLNGYLEEEVYIEQPQGYVQKGQEDKVYRLKKALYGLKQAPR 160

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDG-DIMIICLYVDDMIFTGNNPKMFEEFKKS 486
            AWN R+D YFQKNGF +SPYE++LYTK   G DIMI+CLYVDDMIFTGNNP MF++FKK 
Sbjct: 161  AWNTRVDEYFQKNGFVKSPYEHALYTKTNSGGDIMIVCLYVDDMIFTGNNPGMFDDFKKV 220

Query: 485  MIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVK 306
            M  EFEMTDIG+MSYFLGVEV QS+ G F+ QKKYA++IL+KF M  C  V+TPAE  +K
Sbjct: 221  MTNEFEMTDIGQMSYFLGVEVKQSKDGIFMCQKKYAEQILKKFRMEECKPVSTPAEASIK 280

Query: 305  LKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRY 126
            L+ DS    V+PTL+KSLVGSLRYLT TRPDIM+AVGLV RYMEKP+Q+HF AAKRILRY
Sbjct: 281  LRIDSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGLVCRYMEKPKQDHFMAAKRILRY 340

Query: 125  VRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGY 6
            ++G +D GLFYT   + +LVGY+DSDYGGDLD+ KSTSGY
Sbjct: 341  IKGTLDHGLFYTHSQNSKLVGYSDSDYGGDLDDGKSTSGY 380


>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  476 bits (1224), Expect = e-154
 Identities = 232/340 (68%), Positives = 276/340 (81%), Gaps = 10/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            PEG+ PIGVKWVYKTKTN++GKVEK+KARLVAKGY Q++GVDY+E+FAPVAR        
Sbjct: 892  PEGHSPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLI 951

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNGYLEEEVYI+QPPGY ++ +EDKVY+LKKSLYGLKQAPR
Sbjct: 952  AVAAQYKWKIYQMDVKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPR 1011

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKD-GDIMIICLYVDDMIFTGNNPKMFEEFKKS 486
            AWN RID YF++NGF +SP+E++LYTKK   GDIMI+CLYVDDMIFTGNNP M ++FKK+
Sbjct: 1012 AWNTRIDEYFRRNGFIKSPHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGMSDDFKKA 1071

Query: 485  MIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVK 306
            M KEFEMTDIGEMSYFLGVEV Q + G F+SQKKYA++IL KF M +C  V TPA+ G+K
Sbjct: 1072 MTKEFEMTDIGEMSYFLGVEVKQMQDGIFVSQKKYAEQILNKFKMKDCKPVVTPADPGMK 1131

Query: 305  LKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRY 126
            L  DS    ++PTL+KSLVGSLRYLTITRPDI +AVGLVSR+MEKP+Q+H  AAKRILRY
Sbjct: 1132 LSVDSTRESINPTLFKSLVGSLRYLTITRPDITYAVGLVSRFMEKPKQDHLIAAKRILRY 1191

Query: 125  VRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGY 6
            ++G ++ GLFYT   D +LVGY+DSDYGGDLD+RKSTSGY
Sbjct: 1192 IKGTMNHGLFYTHSQDSKLVGYSDSDYGGDLDDRKSTSGY 1231


>gb|KOM27543.1| hypothetical protein LR48_Vigan437s000300 [Vigna angularis]
          Length = 505

 Score =  424 bits (1091), Expect = e-144
 Identities = 206/340 (60%), Positives = 257/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P+G+K IGVKWVYK K +  G+V+++KARLVAKGYSQ+ G+DY+EVFAPVAR        
Sbjct: 66   PKGHKAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLII 125

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVYI+QP GY +K +EDKV KLKK+LYGLKQAPR
Sbjct: 126  SLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLKLKKALYGLKQAPR 185

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN +ID YF+   F + PYE++LY K +  DI+I+CLYVDD+IFTGNNP MFEEFKK M
Sbjct: 186  AWNVQIDKYFKAANFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDM 245

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
              EFEMTD+G M+Y+LG+EV Q  KG FI+Q+ YAK++L+KF M + N V TP E G+KL
Sbjct: 246  TMEFEMTDMGLMAYYLGIEVKQGNKGIFITQESYAKDVLKKFKMDDANLVGTPMECGIKL 305

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +D  G  VDPTLYKSLVGSLRYLT TRPDI++AVG+VSRYME P   HF++AKRILRY+
Sbjct: 306  SKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHFKSAKRILRYI 365

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G    GL+Y+   D +LVGY+DSD+ GD+D+RKSTSG++
Sbjct: 366  QGTTSYGLYYSISNDYKLVGYSDSDWSGDMDDRKSTSGFV 405


>gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 508

 Score =  417 bits (1072), Expect = e-141
 Identities = 204/340 (60%), Positives = 255/340 (75%), Gaps = 10/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P   +PIGVKWVYKTK   +G++++ KARLVAKGY Q+ G+DY EVFAPVAR        
Sbjct: 36   PADKRPIGVKWVYKTKYKSNGEIDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLI 95

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVY++QP GY +K +EDKVYK KK+LYGLKQAPR
Sbjct: 96   SISAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYKWKKALYGLKQAPR 155

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGD-IMIICLYVDDMIFTGNNPKMFEEFKKS 486
            AW  +ID+YF  NGFQ+ P+E++LY K  D D I+I+CLYVDD+IFTGNNPKMF EF+++
Sbjct: 156  AWYKKIDSYFVDNGFQRCPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFAEFREA 215

Query: 485  MIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVK 306
            M+K FEMTD+G MSYFLG++V Q + G FISQKK+A +IL+KF M N   ++TP E  +K
Sbjct: 216  MVKCFEMTDLGLMSYFLGIKVDQQDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLK 275

Query: 305  LKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRY 126
            L  D  G  V+PTLYKSL+GSLRYLT TRPDI++ VGL+SR+MEKPR  H+QAAKRILRY
Sbjct: 276  LTSDIEGKKVNPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRY 335

Query: 125  VRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGY 6
            ++G + +G+FY K  D  LVGYTDSD+ GD++ RKSTSGY
Sbjct: 336  IKGTLTEGIFYDKDIDVNLVGYTDSDWAGDIETRKSTSGY 375


>gb|KYP52389.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 493

 Score =  410 bits (1055), Expect = e-138
 Identities = 204/341 (59%), Positives = 252/341 (73%), Gaps = 11/341 (3%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P   +PIGVKWVYKTK    G++++ KARLVAKGY Q+ G+DY EVFAPV R        
Sbjct: 20   PADKRPIGVKWVYKTKYKSSGEIDRLKARLVAKGYKQKIGIDYFEVFAPVERLDTIRMLI 79

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEV+++QP GY +K +EDKVYKLKK+LYGLKQAPR
Sbjct: 80   YLSAQNNWKIHQMDVKYAFLNGTLEEEVHVEQPAGYEVKGKEDKVYKLKKALYGLKQAPR 139

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKD--GDIMIICLYVDDMIFTGNNPKMFEEFKK 489
            AW  +ID+YF  NGFQ+ P+E++LY K  D   +I I+CLYVDD+IFTGNNPKMF EF++
Sbjct: 140  AWYKKIDSYFVDNGFQRCPFEHTLYIKSVDHPDNIFIVCLYVDDLIFTGNNPKMFAEFRE 199

Query: 488  SMIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGV 309
            +M+K FEMTD+G MSYFLG+EV Q + G FISQKKYA +IL+KF M N   V+TP E  +
Sbjct: 200  AMVKCFEMTDLGLMSYFLGIEVIQQDDGIFISQKKYAADILKKFKMENSKLVSTPVEGKL 259

Query: 308  KLKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILR 129
            KL  D  G  V+PTLYKSL+GSLRYL  TRPDI++ VGL+SR+MEKPR  H+QAAKRILR
Sbjct: 260  KLTSDIEGKKVNPTLYKSLIGSLRYLIATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILR 319

Query: 128  YVRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGY 6
            Y++G + +G+FY K  D  LVGYTDSD+ GD++ RKSTSGY
Sbjct: 320  YIKGTLTEGIFYDKDIDVNLVGYTDSDWAGDIEMRKSTSGY 360


>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 972

 Score =  424 bits (1089), Expect = e-138
 Identities = 206/341 (60%), Positives = 260/341 (76%), Gaps = 10/341 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            PE  K IGVKWVYKTK N  G+V+++KARLVAKGY Q+EG+DY EVFAPVAR        
Sbjct: 20   PENKKAIGVKWVYKTKKNAKGEVQRYKARLVAKGYKQREGIDYGEVFAPVARLETIRLMI 79

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG+LEEE+Y++QP GY+    + KVYKLKK+LYGLKQAP 
Sbjct: 80   SLAAQHRWKIYQLDVKSAFLNGFLEEEIYVEQPLGYIEAENKGKVYKLKKALYGLKQAPP 139

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKK-KDGDIMIICLYVDDMIFTGNNPKMFEEFKKS 486
            AWN RID YFQ NGF++ PYE+++Y KK  +G I+  CLYVDD+IFTGNNP MF++FK++
Sbjct: 140  AWNTRIDRYFQDNGFEKCPYEHAIYVKKGANGSILFACLYVDDLIFTGNNPTMFDDFKQN 199

Query: 485  MIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVK 306
            M+ EFEMTDIG MS+FLG+EV+Q E+G F+SQ  YAK+IL++F M +CN V+TP E GV+
Sbjct: 200  MVHEFEMTDIGLMSHFLGLEVTQKEEGIFVSQSGYAKDILERFKMESCNPVSTPVENGVE 259

Query: 305  LKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRY 126
            L++   G+ VDPT +KSLVGSLRYLT TRPDI++ VGLVSRYME P Q H  AAKRILRY
Sbjct: 260  LRKSKVGN-VDPTYFKSLVGSLRYLTCTRPDILYGVGLVSRYMETPDQSHLNAAKRILRY 318

Query: 125  VRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            ++G +++G+FYT   D  LVGY+DSD+G DLDERKST+G++
Sbjct: 319  IKGTMNEGMFYTSSKDFNLVGYSDSDWGRDLDERKSTTGFV 359


>gb|PRQ55986.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 709

 Score =  416 bits (1068), Expect = e-137
 Identities = 205/341 (60%), Positives = 255/341 (74%), Gaps = 10/341 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P+G + IGVKWVYKTK  QDG+V+K+KARLVAKGY Q+ GVDY+EVFAPVA+        
Sbjct: 213  PKGQQSIGVKWVYKTKLRQDGEVDKYKARLVAKGYKQKFGVDYQEVFAPVAKLDTVWMVL 272

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFL+G LEEEVYI QPPGYV +  E++VY+LKK+LYGLKQAPR
Sbjct: 273  CLAAQNSWPVYQLDVKSAFLHGELEEEVYINQPPGYVKQVFENQVYRLKKALYGLKQAPR 332

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKK-KDGDIMIICLYVDDMIFTGNNPKMFEEFKKS 486
            AW + IDA+F K GF + PYE++LYTK   DG I+++CLYVDD+I+T NN  M + FKKS
Sbjct: 333  AWYSHIDAFFVKEGFCKCPYEHTLYTKLGDDGRILVMCLYVDDLIYTSNNSLMLDAFKKS 392

Query: 485  MIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVK 306
            M++EF+MTD+G M YFLG+E+ QS  G FISQKKYA E+L++F MGNCNSV TP EVG+K
Sbjct: 393  MMEEFDMTDLGLMRYFLGIEILQSSAGIFISQKKYALEVLERFKMGNCNSVCTPTEVGLK 452

Query: 305  LKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRY 126
            L ++  G  V+ TLYK +VGSL YLT TRPDIMFAV +VSRYMEKP ++H  A KRILRY
Sbjct: 453  LTKNGSGKRVNATLYKQIVGSLMYLTTTRPDIMFAVSMVSRYMEKPMEDHLVAVKRILRY 512

Query: 125  VRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            ++G  D G+FY K     L G+TDSDY GD+D+RKSTSG++
Sbjct: 513  LKGTADLGIFYKKFQSSNLCGFTDSDYAGDMDDRKSTSGFV 553


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
 gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  431 bits (1107), Expect = e-137
 Identities = 210/340 (61%), Positives = 259/340 (76%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P G+K IGVKWVYK K N  G+VE++KARLVAKGYSQ+ G+DY+EVFAPVAR        
Sbjct: 841  PNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLII 900

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVYI+QP GY++K +EDKV +LKK+LYGLKQAPR
Sbjct: 901  SLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPR 960

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF++  F + PYE++LY K +  DI+I CLYVDD+IFTGNNP MFEEFKK M
Sbjct: 961  AWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEM 1020

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTDIG MSY+LG+EV Q + G FI+Q+ YAKE+L+KF M + N V TP E G+KL
Sbjct: 1021 TKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL 1080

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G  VDPT +KSLVGSLRYLT TRPDI++AVG+VSRYME P   HF+AAKRILRY+
Sbjct: 1081 SKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYI 1140

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G ++ GL Y+  +D +LVGY+DSD+GGD+D+RKSTSG++
Sbjct: 1141 KGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFV 1180


>gb|KYP39799.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 502

 Score =  407 bits (1047), Expect = e-137
 Identities = 197/340 (57%), Positives = 253/340 (74%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            PEG +PIGVKWVYK K N +G+VE++KARLV KGY Q+EG+DY+EVFAPV R        
Sbjct: 60   PEGARPIGVKWVYKKKMNAEGEVERYKARLVVKGYKQKEGIDYDEVFAPVTRMESIRLLI 119

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG L+EEVY++QP GY+ +  E KV +L+K+LYGLKQAPR
Sbjct: 120  SLAAQRQWKILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGDEKKVLRLRKALYGLKQAPR 179

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF+KNG++Q PYE++LY K    D+M++ LYVDD+IFTG+N K+ +EFK+ M
Sbjct: 180  AWNERIDGYFKKNGYEQCPYEHALYIKNSGKDMMVVALYVDDLIFTGSNAKLIKEFKEIM 239

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
            +KEFEMTD+G M YFLG+EV QS +G FISQ++YA EIL+KF M +CN V+TP E G KL
Sbjct: 240  MKEFEMTDLGLMKYFLGLEVKQSNEGIFISQERYALEILKKFKMEDCNPVSTPMEPGTKL 299

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G   D   Y+SLVGSLRYLT TRPD+M +VG+ SR+ME P   H++A KRILRYV
Sbjct: 300  SKFDGGERADSGRYRSLVGSLRYLTCTRPDLMLSVGMTSRFMEDPSYTHWKALKRILRYV 359

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G++  G+FY+K  D RLVGY+DSD+ GD+D+RKSTSGY+
Sbjct: 360  QGSLSLGIFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYV 399


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  428 bits (1101), Expect = e-136
 Identities = 209/340 (61%), Positives = 258/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P G+K IGVKWVYK K N  G+VE++KARLVAKGY Q+ G+DY+EVFAPVAR        
Sbjct: 873  PNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLII 932

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVYI+QP GY++K +EDKV +LKK+LYGLKQAPR
Sbjct: 933  SLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPR 992

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF++  F + PYE++LY K +  DI+I CLYVDD+IFTGNNP MFEEFKK M
Sbjct: 993  AWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEM 1052

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTDIG MSY+LG+EV Q + G FI+Q+ YAKE+L+KF M + N V TP E G+KL
Sbjct: 1053 TKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL 1112

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G  VDPT +KSLVGSLRYLT TRPDI++AVG+VSRYME P   HF+AAKRILRY+
Sbjct: 1113 SKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYI 1172

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G ++ GL Y+  +D +LVGY+DSD+GGD+D+RKSTSG++
Sbjct: 1173 KGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFV 1212


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  427 bits (1099), Expect = e-136
 Identities = 209/340 (61%), Positives = 258/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P G+K IGVKWVYK K N  G+VE++KARLVAKGYSQ+ G+DY+EVFAPVAR        
Sbjct: 873  PNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLII 932

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVYI+QP GY++K +EDKV +LKK LYGLKQAPR
Sbjct: 933  SLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPR 992

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF++  F + PYE++LY K +  DI+I CLYVDD+IFTGNNP +FEEFKK M
Sbjct: 993  AWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEM 1052

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTDIG MSY+LG+EV Q + G FI+Q+ YAKE+L+KF M + N V TP E G+KL
Sbjct: 1053 TKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL 1112

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G  VDPT +KSLVGSLRYLT TRPDI++AVG+VSRYME P   HF+AAKRILRY+
Sbjct: 1113 SKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYI 1172

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G ++ GL Y+  +D +LVGY+DSD+GGD+D+RKSTSG++
Sbjct: 1173 KGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFV 1212


>gb|KYP73058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 654

 Score =  409 bits (1052), Expect = e-136
 Identities = 198/340 (58%), Positives = 254/340 (74%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            PEG +PIGVKWVYK K N +G+VE++KARLV KGY Q+EG+DY+EVFAPV R        
Sbjct: 212  PEGARPIGVKWVYKKKMNAEGEVERYKARLVVKGYKQKEGIDYDEVFAPVTRMESIRLLI 271

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG L+EEVY++QP GY+ +  E KV +L+K+LYGLKQAPR
Sbjct: 272  SLAAQRQWQILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGDEKKVLRLRKALYGLKQAPR 331

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF+KNG++Q PYE++LY KK   D+M++ LYVDD+IFTG+N K+ +EFK+ M
Sbjct: 332  AWNERIDGYFKKNGYEQCPYEHALYIKKSGKDMMVVALYVDDLIFTGSNAKLIKEFKEIM 391

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
            +KEFEMTD+G M YFLG+EV QS +G FISQ++YA EIL+KF M +CN V+TP E G KL
Sbjct: 392  MKEFEMTDLGLMKYFLGLEVKQSNEGIFISQERYALEILKKFKMEDCNPVSTPMEPGTKL 451

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G   D   Y+SLVGSLRYLT TRPD+M +VG+ SR+ME P   H++A KRILRYV
Sbjct: 452  SKFDGGERADSGRYRSLVGSLRYLTCTRPDLMLSVGMTSRFMEDPSYTHWKALKRILRYV 511

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G++  G+FY+K  D RLVGY+DSD+ GD+D+RKSTSGY+
Sbjct: 512  QGSLSLGIFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYV 551


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  426 bits (1095), Expect = e-135
 Identities = 208/340 (61%), Positives = 258/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P G+K IGVKWVYK K N  G+VE++KARLVAKGYSQ+ G+DY+EVFAPVAR        
Sbjct: 873  PNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLII 932

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVYI+QP GY++K +EDKV +LKK LYGLKQAPR
Sbjct: 933  SLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPR 992

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF++  F + PYE++LY K +  DI+I CLYVDD+IFTGNNP +FEEFKK M
Sbjct: 993  AWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEM 1052

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTDIG MSY+LG+EV Q + G FI+Q+ YAKE+L+KF + + N V TP E G+KL
Sbjct: 1053 TKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKL 1112

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G  VDPT +KSLVGSLRYLT TRPDI++AVG+VSRYME P   HF+AAKRILRY+
Sbjct: 1113 SKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYI 1172

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G ++ GL Y+  +D +LVGY+DSD+GGD+D+RKSTSG++
Sbjct: 1173 KGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFV 1212


>gb|KYP55970.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 494

 Score =  402 bits (1033), Expect = e-135
 Identities = 194/340 (57%), Positives = 255/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            PEG +PIGVKWVYK K N +G+VE++KARLV KGY Q++G+DY+EVF+PV R        
Sbjct: 20   PEGARPIGVKWVYKKKMNVEGEVERYKARLVVKGYRQKKGIDYDEVFSPVTRMESIRLLI 79

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG L+EEVY++QP GY+ +  E KV +L+KSLYGLKQAPR
Sbjct: 80   SLAAQKQWPILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGDEKKVLRLRKSLYGLKQAPR 139

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            +WN RID YF+KNG++Q PYE++LY KK + D+M++ LYVDD+IFTG+N K+ +EFK+ M
Sbjct: 140  SWNERIDGYFKKNGYEQCPYEHALYIKKSEKDMMVVALYVDDLIFTGSNAKLIKEFKEIM 199

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTD+G M YFLG+EV QS++G FISQ++YA EIL+KF M +CN V+TP E G KL
Sbjct: 200  KKEFEMTDLGLMKYFLGLEVKQSDEGIFISQERYALEILKKFKMEDCNPVSTPMEPGTKL 259

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G   +   ++SLVGSLRYLT TRPD+M +VG+ S++ME P   H++A KRILRYV
Sbjct: 260  SKFDGGERANSGRFRSLVGSLRYLTSTRPDLMLSVGITSKFMEDPSYTHWKALKRILRYV 319

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            RG++  GLFY+K  D +LVGY+DSD+ GD+D+RKSTSGY+
Sbjct: 320  RGSLSLGLFYSKSDDYQLVGYSDSDWCGDVDDRKSTSGYV 359


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  423 bits (1087), Expect = e-134
 Identities = 207/340 (60%), Positives = 256/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P G+K IGVKWVYK K N  G+VE++KARLVAKGYSQ+ G+DY+EVFAPVAR        
Sbjct: 812  PNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLII 871

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG  EEEVYI+QP GY++K +EDKV +LKK+LYGLKQAPR
Sbjct: 872  SLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPR 931

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF++  F + PYE++LY K +  DI+I CLYVDD+IFTGNNP MFEEFKK M
Sbjct: 932  AWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEM 991

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTDIG MSY+LG+EV Q +   FI+Q+ YAKE+L+KF M + N V TP E G+KL
Sbjct: 992  TKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL 1051

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +   G  VDPT +KSLVGSLRYLT TRPDI++AVG+VSRYME P   HF+AAKRILRY+
Sbjct: 1052 SKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYI 1111

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G ++ GL Y+  +D +LVGY+DSD+G D+D+RKSTSG++
Sbjct: 1112 KGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFV 1151


>gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 990

 Score =  414 bits (1064), Expect = e-134
 Identities = 204/340 (60%), Positives = 253/340 (74%), Gaps = 10/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P   KPIGVKWVYKTK    G++++ KARLV KGY Q+ G+DY EVFAPVAR        
Sbjct: 518  PADKKPIGVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLI 577

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVY++QP GY +K +EDKVY+LKK+LYGLKQAPR
Sbjct: 578  SLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPR 637

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGD-IMIICLYVDDMIFTGNNPKMFEEFKKS 486
            AW  +ID+YF  NGFQ+ P+E++LY K  D D I+I+CLYVDD+IFTGNNPKMF +F+++
Sbjct: 638  AWYKKIDSYFVNNGFQKCPFEHTLYIKSVDLDNILIVCLYVDDLIFTGNNPKMFAKFREA 697

Query: 485  MIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVK 306
            M K FEMTD+G MSYFLG+EV Q + G FISQKK+A +IL+KF M N   ++TP E  +K
Sbjct: 698  MAKCFEMTDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLK 757

Query: 305  LKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRY 126
            L  D  G  V+PTLYKSL+GSLRYLT TRPDI++ VGL+SR+MEKPR  H+QAAKRILRY
Sbjct: 758  LTSDIGGKKVNPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRY 817

Query: 125  VRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGY 6
            ++G + +G+FY K  D  LVGYTDSD+ GD++ RKSTSGY
Sbjct: 818  IKGTLTEGIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGY 857


>gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  417 bits (1072), Expect = e-133
 Identities = 205/340 (60%), Positives = 254/340 (74%), Gaps = 10/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P   KPIGVKWVYKTK    G++++ KARLV KGY Q+ G+DY EVFAPVAR        
Sbjct: 756  PADKKPIGVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLI 815

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVY++QP GY +K +EDKVY+LKK+LYGLKQAPR
Sbjct: 816  SLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPR 875

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGD-IMIICLYVDDMIFTGNNPKMFEEFKKS 486
            AW  +ID+YF  NGFQ+ P+E++LY K  D D I+I+CLYVDD+IFTGNNPKMF EF+++
Sbjct: 876  AWYKKIDSYFVDNGFQRCPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFVEFREA 935

Query: 485  MIKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVK 306
            M+K FEMTD+G MSYFLG+EV Q + G FISQKK+A +IL+KF M N   ++TP E  +K
Sbjct: 936  MVKCFEMTDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLK 995

Query: 305  LKQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRY 126
            L  D  G  V+PTLYKSL+GSLRYLT TRPDI++ VGL+SR+MEKPR  H+QAAKRILRY
Sbjct: 996  LTSDIGGKKVNPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRY 1055

Query: 125  VRGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGY 6
            ++G + +G+FY K  D  LVGYTDSD+ GD++ RKSTSGY
Sbjct: 1056 IKGTLTEGIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGY 1095


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  418 bits (1074), Expect = e-132
 Identities = 202/340 (59%), Positives = 255/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P+ +  IGVKWVYK K +  G+V+++KARLVAKGYSQ+ G+DY+EVFAPVAR        
Sbjct: 859  PKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLII 918

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVYI+QP GY +K +EDKV +LKK+LYGLKQAPR
Sbjct: 919  SLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPR 978

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF++  F + PYE++LY K +  DI+I+CLYVDD+IFTGNNP MFEEFKK M
Sbjct: 979  AWNVRIDKYFKEANFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDM 1038

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTD+G M+Y+LG+EV Q  +G FI+Q+ YAK++L+KF + + N V TP E G+KL
Sbjct: 1039 TKEFEMTDMGLMAYYLGIEVKQGNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKL 1098

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +D  G  VDPTLYKSLVGSLRYLT TRPDI++AVG+VSRYME P   H + AKRILRY+
Sbjct: 1099 SKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYI 1158

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G    GL+Y+   D +LVGY+DSD+ GD+D+RKSTSG++
Sbjct: 1159 KGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFV 1198


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  418 bits (1074), Expect = e-132
 Identities = 202/340 (59%), Positives = 255/340 (75%), Gaps = 9/340 (2%)
 Frame = -1

Query: 995  PEGNKPIGVKWVYKTKTNQDGKVEKHKARLVAKGYSQQEGVDYEEVFAPVARXXXXXXXX 816
            P+ +  IGVKWVYK K +  G+V+++KARLVAKGYSQ+ G+DY+EVFAPVAR        
Sbjct: 870  PKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLII 929

Query: 815  XXXXXXXX---------AFLNGYLEEEVYIKQPPGYVMKNQEDKVYKLKKSLYGLKQAPR 663
                             AFLNG LEEEVYI+QP GY +K +EDKV +LKK+LYGLKQAPR
Sbjct: 930  SLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPR 989

Query: 662  AWNARIDAYFQKNGFQQSPYEYSLYTKKKDGDIMIICLYVDDMIFTGNNPKMFEEFKKSM 483
            AWN RID YF++  F + PYE++LY K +  DI+I+CLYVDD+IFTGNNP MFEEFKK M
Sbjct: 990  AWNVRIDKYFKEANFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDM 1049

Query: 482  IKEFEMTDIGEMSYFLGVEVSQSEKGTFISQKKYAKEILQKFNMGNCNSVTTPAEVGVKL 303
             KEFEMTD+G M+Y+LG+EV Q  +G FI+Q+ YAK++L+KF + + N V TP E G+KL
Sbjct: 1050 TKEFEMTDMGLMAYYLGIEVKQGNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKL 1109

Query: 302  KQDSPGSFVDPTLYKSLVGSLRYLTITRPDIMFAVGLVSRYMEKPRQEHFQAAKRILRYV 123
             +D  G  VDPTLYKSLVGSLRYLT TRPDI++AVG+VSRYME P   H + AKRILRY+
Sbjct: 1110 SKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYI 1169

Query: 122  RGNIDQGLFYTKCADPRLVGYTDSDYGGDLDERKSTSGYM 3
            +G    GL+Y+   D +LVGY+DSD+ GD+D+RKSTSG++
Sbjct: 1170 KGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFV 1209