BLASTX nr result

ID: Ophiopogon24_contig00006047 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00006047
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010942313.1| PREDICTED: probable BOI-related E3 ubiquitin...    59   2e-07
ref|XP_010942314.1| PREDICTED: probable BOI-related E3 ubiquitin...    58   4e-07
ref|XP_008797071.1| PREDICTED: probable BOI-related E3 ubiquitin...    56   2e-06
ref|XP_008797073.1| PREDICTED: probable BOI-related E3 ubiquitin...    55   4e-06

>ref|XP_010942313.1| PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3
           isoform X1 [Elaeis guineensis]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 404 QYPNNTFSPDFRSSRIQNNMLDELQMLQDRDASHHHHQLLGAINHGVG 261
           QYP+N FSPDFRS R +N++L+ELQMLQDR   HH   LLG  +H  G
Sbjct: 6   QYPSNAFSPDFRS-RSRNSVLEELQMLQDRTRHHHLGSLLGGYSHLAG 52


>ref|XP_010942314.1| PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3
           isoform X2 [Elaeis guineensis]
          Length = 383

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -3

Query: 404 QYPNNTFSPDFRSSRIQNNMLDELQMLQDRDASHHHHQLLGAINH 270
           QYP+N FSPDFRS R +N++L+ELQMLQDR   HH   LLG  +H
Sbjct: 6   QYPSNAFSPDFRS-RSRNSVLEELQMLQDRTRHHHLGSLLGGYSH 49


>ref|XP_008797071.1| PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3
           isoform X1 [Phoenix dactylifera]
          Length = 380

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
 Frame = -3

Query: 404 QYPNNTFSPDFRSS----RIQNNMLDELQMLQDRDASHHHHQLLGAINHGVG 261
           QYP++ FSPDFRSS    R +N++L++LQMLQDR   HH   LLG   H  G
Sbjct: 6   QYPSDAFSPDFRSSTPFSRSRNSVLEDLQMLQDRTRHHHIGSLLGGYTHLAG 57


>ref|XP_008797073.1| PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3
           isoform X2 [Phoenix dactylifera]
          Length = 379

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
 Frame = -3

Query: 404 QYPNNTFSPDFRSS----RIQNNMLDELQMLQDRDASHHHHQLLGAINH 270
           QYP++ FSPDFRSS    R +N++L++LQMLQDR   HH   LLG   H
Sbjct: 6   QYPSDAFSPDFRSSTPFSRSRNSVLEDLQMLQDRTRHHHIGSLLGGYTH 54


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