BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005986
         (475 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [As...    91   4e-18
ref|XP_010934229.1| PREDICTED: pre-mRNA-processing factor 39-lik...    72   1e-11
ref|XP_008785146.1| PREDICTED: pre-mRNA-processing factor 39 [Ph...    62   5e-08
ref|XP_008801264.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    56   4e-06

>ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 ref|XP_020248700.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 ref|XP_020248701.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 gb|ONK57321.1| uncharacterized protein A4U43_C10F18870 [Asparagus officinalis]
          Length = 817

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 53/105 (50%), Positives = 60/105 (57%)
 Frame = -1

Query: 316 MEVSQPVASEASAMTVDPSPCVHAEHTGADMVAESGGEELTSVSTGGVVYASVDGSNLGC 137
           ME SQPVA+E+   T+     V A       V ESGGEE T   + GV YAS DGS L  
Sbjct: 1   MEGSQPVATESVTATIPAKEIVRAT------VPESGGEEATHACSAGVAYASADGSKLAD 54

Query: 136 GNVRSQDVNSVTLDAAQSVAYESKPEAVADVDGENVVNHENPADM 2
           GNV++QDVN  T DAA SV Y SKPE      G NV N+EN   M
Sbjct: 55  GNVQNQDVNLGTQDAAHSVTYGSKPEVEGVAAGANVANYENSTGM 99


>ref|XP_010934229.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
          Length = 833

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 49/106 (46%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
 Frame = -1

Query: 316 MEVSQPVASEASAMTVDPSPCVH--AEHTGADMVAESGGEEL-TSVSTGGVVYASVDGSN 146
           ME SQ V S+AS+   D S   H  AE+   D  A SGGE L +SV T    YA  DG+N
Sbjct: 1   MEDSQAVVSQASS-AADYSSTAHVPAEYPMTDSAAPSGGEGLVSSVPTAATDYALSDGTN 59

Query: 145 LGCGNVRSQDVNSVTLDAAQSVAYESKPEAVADVDGENVVNHENPA 8
           L   N+ SQ+ NSV  +A   +AYESKP+  A V  EN + HE  A
Sbjct: 60  LDERNMYSQEPNSVEQNATYGMAYESKPDGGAAVASENAIGHETVA 105


>ref|XP_008785146.1| PREDICTED: pre-mRNA-processing factor 39 [Phoenix dactylifera]
 ref|XP_008785147.1| PREDICTED: pre-mRNA-processing factor 39 [Phoenix dactylifera]
          Length = 829

 Score = 61.6 bits (148), Expect = 5e-08
 Identities = 45/105 (42%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
 Frame = -1

Query: 316 MEVSQPVASEAS-AMTVDPSPCVHAEHTGADMVAESGGEEL-TSVSTGGVVYASVDGSNL 143
           ME SQ V S+AS A     +  V AE+   D  A SGGE L +S  T     A  DG+N 
Sbjct: 1   MEDSQSVVSQASNAADYVSTGHVPAEYPMTDSAALSGGENLVSSAPTAPTDCALSDGTNP 60

Query: 142 GCGNVRSQDVNSVTLDAAQSVAYESKPEAVADVDGENVVNHENPA 8
              N+ SQD NSV   A   + YESKP+  A V  EN + HE  A
Sbjct: 61  DDRNMYSQDPNSVAQSATYGITYESKPDGGAAVATENAIGHETVA 105


>ref|XP_008801264.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-like
           [Phoenix dactylifera]
          Length = 824

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = -1

Query: 316 MEVSQPVASEASAMTVDPSP-CVHAEHTGADMVAESGGEELTS-VSTGGVVYASVDGSNL 143
           M+ SQ   S+AS +    S   V AE+     +  SGGE L S V T    YA  D SN 
Sbjct: 1   MDDSQSAVSQASNVAEYSSTGLVPAEYP----MTNSGGEGLVSCVPTAATDYALSDSSNP 56

Query: 142 GCGNVRSQDVNSVTLDAAQSVAYESKPEAVADVDGENVVNHENPA 8
           G GN+ SQD NSV  +A   +AYESKP+  A V  E  + HE  A
Sbjct: 57  GNGNMYSQDTNSVAQNA--GMAYESKPDDGAAVASEIAIGHETVA 99