BLASTX nr result
ID: Ophiopogon24_contig00005919
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00005919
(1664 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020260769.1| LOW QUALITY PROTEIN: conserved oligomeric Go... 101 1e-18
ref|XP_020273551.1| conserved oligomeric Golgi complex subunit 4... 97 2e-17
gb|AQL09386.1| Pentatricopeptide repeat-containing protein mitoc... 86 2e-15
gb|ACN26249.1| unknown [Zea mays] 86 2e-14
gb|AQL09385.1| Pentatricopeptide repeat-containing protein mitoc... 86 5e-14
gb|PKA60038.1| Conserved oligomeric Golgi complex subunit 4 [Apo... 86 7e-14
ref|NP_001309435.1| conserved oligomeric Golgi complex subunit 4... 86 7e-14
ref|XP_020097435.1| conserved oligomeric Golgi complex subunit 4... 86 1e-13
gb|OAY81239.1| Conserved oligomeric Golgi complex subunit 4 [Ana... 86 1e-13
ref|XP_010934198.1| PREDICTED: conserved oligomeric Golgi comple... 85 2e-13
gb|PAN05818.1| hypothetical protein PAHAL_D02603 [Panicum hallii] 84 2e-13
ref|XP_004952417.1| conserved oligomeric Golgi complex subunit 4... 85 2e-13
ref|XP_004952416.1| conserved oligomeric Golgi complex subunit 4... 85 2e-13
ref|XP_020686667.1| conserved oligomeric Golgi complex subunit 4... 84 3e-13
ref|XP_008785105.1| PREDICTED: conserved oligomeric Golgi comple... 84 3e-13
gb|PAN05819.1| hypothetical protein PAHAL_D02603 [Panicum hallii] 84 3e-13
ref|XP_002468432.1| conserved oligomeric Golgi complex subunit 4... 84 4e-13
ref|XP_008651465.1| conserved oligomeric Golgi complex subunit 4... 83 8e-13
dbj|BAD19993.1| pentatricopeptide (PPR) repeat-containing protei... 82 1e-12
ref|XP_020572165.1| conserved oligomeric Golgi complex subunit 4... 82 1e-12
>ref|XP_020260769.1| LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit
4-like [Asparagus officinalis]
Length = 727
Score = 101 bits (251), Expect = 1e-18
Identities = 53/83 (63%), Positives = 62/83 (74%)
Frame = +2
Query: 1187 VPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGGT 1366
V +LIG YLV +EFFM+E VR+A +ID+QQ DSL TS VDDVFFVLQ CR S G
Sbjct: 383 VVQELIGYYLVLEEFFMVENVRKAISIDEQQLDSLTTSMVDDVFFVLQSCCRRAISTGSM 442
Query: 1367 QLMFAVRSGATSLMIHEYQKALQ 1435
+FAV SGATSL+ HEYQ+ALQ
Sbjct: 443 NSVFAVLSGATSLLSHEYQEALQ 465
>ref|XP_020273551.1| conserved oligomeric Golgi complex subunit 4-like [Asparagus
officinalis]
Length = 757
Score = 97.1 bits (240), Expect = 2e-17
Identities = 51/83 (61%), Positives = 61/83 (73%)
Frame = +2
Query: 1187 VPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGGT 1366
V +LIG YLV +EFFM+E VR+A +ID+QQ D L TS VDDVFFVLQ CR S G
Sbjct: 413 VVQELIGYYLVLEEFFMVENVRKAISIDEQQLDGLTTSMVDDVFFVLQSCCRRAISTGSM 472
Query: 1367 QLMFAVRSGATSLMIHEYQKALQ 1435
+FAV SGATSL+ +EYQ+ALQ
Sbjct: 473 NSVFAVLSGATSLLSNEYQEALQ 495
>gb|AQL09386.1| Pentatricopeptide repeat-containing protein mitochondrial [Zea mays]
Length = 212
Score = 86.3 bits (212), Expect = 2e-15
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR TS
Sbjct: 69 KMEQDLTGFYVIFEEFFMVENVRKAIRIDEPISDGLTTSMVDDVFFVLQSCCRRATSTAS 128
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GATSL+ +EYQ+ALQ
Sbjct: 129 INSVIAVLGGATSLLSNEYQEALQ 152
>gb|ACN26249.1| unknown [Zea mays]
Length = 375
Score = 86.3 bits (212), Expect = 2e-14
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR TS
Sbjct: 30 KMEQDLTGFYVIFEEFFMVENVRKAIRIDEPISDGLTTSMVDDVFFVLQSCCRRATSTAS 89
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GATSL+ +EYQ+ALQ
Sbjct: 90 INSVIAVLGGATSLLSNEYQEALQ 113
>gb|AQL09385.1| Pentatricopeptide repeat-containing protein mitochondrial [Zea mays]
Length = 562
Score = 86.3 bits (212), Expect = 5e-14
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR TS
Sbjct: 416 KMEQDLTGFYVIFEEFFMVENVRKAIRIDEPISDGLTTSMVDDVFFVLQSCCRRATSTAS 475
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GATSL+ +EYQ+ALQ
Sbjct: 476 INSVIAVLGGATSLLSNEYQEALQ 499
>gb|PKA60038.1| Conserved oligomeric Golgi complex subunit 4 [Apostasia shenzhenica]
Length = 760
Score = 86.3 bits (212), Expect = 7e-14
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
RV L G Y++ +EFFM+E VR+A +ID+Q DSL TS VDD F+VLQ CR S
Sbjct: 415 RVVQDLTGFYVILEEFFMVENVRKAISIDEQVPDSLTTSMVDDAFYVLQSCCRRAISTAS 474
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+FAV SGA +L+ +EYQ+ALQ
Sbjct: 475 INSVFAVLSGAMNLLTNEYQEALQ 498
>ref|NP_001309435.1| conserved oligomeric Golgi complex subunit 4-like [Zea mays]
gb|AQL09387.1| Pentatricopeptide repeat-containing protein mitochondrial [Zea mays]
Length = 761
Score = 86.3 bits (212), Expect = 7e-14
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR TS
Sbjct: 416 KMEQDLTGFYVIFEEFFMVENVRKAIRIDEPISDGLTTSMVDDVFFVLQSCCRRATSTAS 475
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GATSL+ +EYQ+ALQ
Sbjct: 476 INSVIAVLGGATSLLSNEYQEALQ 499
>ref|XP_020097435.1| conserved oligomeric Golgi complex subunit 4 [Ananas comosus]
Length = 778
Score = 85.5 bits (210), Expect = 1e-13
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = +2
Query: 1181 FRVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIG 1360
+RV L G Y++ +EFFM+E VR+A ID+++ DSL TS VDDVFFVLQ C+ S
Sbjct: 432 YRVVQDLTGFYVILEEFFMVENVRKAIKIDEREADSLTTSMVDDVFFVLQSCCKRAISTS 491
Query: 1361 GTQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV SGA +L+ +EYQ+ALQ
Sbjct: 492 SINSVLAVLSGAMNLLSNEYQEALQ 516
>gb|OAY81239.1| Conserved oligomeric Golgi complex subunit 4 [Ananas comosus]
Length = 778
Score = 85.5 bits (210), Expect = 1e-13
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = +2
Query: 1181 FRVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIG 1360
+RV L G Y++ +EFFM+E VR+A ID+++ DSL TS VDDVFFVLQ C+ S
Sbjct: 432 YRVVQDLTGFYVILEEFFMVENVRKAIKIDEREADSLTTSMVDDVFFVLQSCCKRAISTS 491
Query: 1361 GTQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV SGA +L+ +EYQ+ALQ
Sbjct: 492 SINSVLAVLSGAMNLLSNEYQEALQ 516
>ref|XP_010934198.1| PREDICTED: conserved oligomeric Golgi complex subunit 4 [Elaeis
guineensis]
Length = 760
Score = 85.1 bits (209), Expect = 2e-13
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
RV L G Y++ +EFFM+E VR+A ID+ DSL TS VDDVF+VLQ CR S
Sbjct: 415 RVVQDLTGFYVILEEFFMVENVRKAITIDEHVPDSLTTSMVDDVFYVLQSCCRRAISTSS 474
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+FAV SGA +L+ +EYQ+ALQ
Sbjct: 475 INSVFAVLSGAMNLLSNEYQEALQ 498
>gb|PAN05818.1| hypothetical protein PAHAL_D02603 [Panicum hallii]
Length = 553
Score = 84.3 bits (207), Expect = 2e-13
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVF+VLQ CR S
Sbjct: 417 KMEQDLTGFYVIFEEFFMVENVRKAIRIDEPIPDGLTTSMVDDVFYVLQSCCRRAASTAS 476
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV SGATSL+ +EYQ+ALQ
Sbjct: 477 INSVLAVLSGATSLLSNEYQEALQ 500
>ref|XP_004952417.1| conserved oligomeric Golgi complex subunit 4 isoform X2 [Setaria
italica]
gb|KQL29537.1| hypothetical protein SETIT_016399mg [Setaria italica]
Length = 762
Score = 84.7 bits (208), Expect = 2e-13
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR S
Sbjct: 417 KMEQDLTGFYVIFEEFFMVENVRKAVRIDEPVPDGLTTSMVDDVFFVLQSCCRRAASTAS 476
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GATSL+ +EYQ+ALQ
Sbjct: 477 INSVLAVLGGATSLLSNEYQEALQ 500
>ref|XP_004952416.1| conserved oligomeric Golgi complex subunit 4 isoform X1 [Setaria
italica]
gb|KQL29536.1| hypothetical protein SETIT_016399mg [Setaria italica]
Length = 763
Score = 84.7 bits (208), Expect = 2e-13
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR S
Sbjct: 417 KMEQDLTGFYVIFEEFFMVENVRKAVRIDEPVPDGLTTSMVDDVFFVLQSCCRRAASTAS 476
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GATSL+ +EYQ+ALQ
Sbjct: 477 INSVLAVLGGATSLLSNEYQEALQ 500
>ref|XP_020686667.1| conserved oligomeric Golgi complex subunit 4 [Dendrobium catenatum]
gb|PKU78327.1| Conserved oligomeric Golgi complex subunit 4 [Dendrobium catenatum]
Length = 760
Score = 84.3 bits (207), Expect = 3e-13
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
RV L G Y++ +EFFM+E VR+A ID+ DSL TS VDDVF+VLQ CR S G
Sbjct: 415 RVVQDLTGFYVILEEFFMVENVRKAITIDEHVPDSLTTSMVDDVFYVLQSCCRRAISTGS 474
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ + A+ SGA +L+ +EYQ ALQ
Sbjct: 475 SNSVIALLSGAINLLTNEYQDALQ 498
>ref|XP_008785105.1| PREDICTED: conserved oligomeric Golgi complex subunit 4 [Phoenix
dactylifera]
Length = 760
Score = 84.3 bits (207), Expect = 3e-13
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
RV L G Y++ +EFFM+E VR+A ID+ DSL TS VDDVF+VLQ CR S
Sbjct: 415 RVVQDLTGFYVILEEFFMVENVRKAIKIDEPVPDSLTTSMVDDVFYVLQSCCRRAISTSS 474
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+FAV SGA +L+ +EYQ+ALQ
Sbjct: 475 INSVFAVLSGAMNLLSNEYQEALQ 498
>gb|PAN05819.1| hypothetical protein PAHAL_D02603 [Panicum hallii]
Length = 762
Score = 84.3 bits (207), Expect = 3e-13
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVF+VLQ CR S
Sbjct: 417 KMEQDLTGFYVIFEEFFMVENVRKAIRIDEPIPDGLTTSMVDDVFYVLQSCCRRAASTAS 476
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV SGATSL+ +EYQ+ALQ
Sbjct: 477 INSVLAVLSGATSLLSNEYQEALQ 500
>ref|XP_002468432.1| conserved oligomeric Golgi complex subunit 4 [Sorghum bicolor]
gb|EER95430.1| hypothetical protein SORBI_3001G490500 [Sorghum bicolor]
Length = 762
Score = 84.0 bits (206), Expect = 4e-13
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR S
Sbjct: 417 KMEQDLTGFYVIFEEFFMVENVRKAIRIDEPIPDGLTTSMVDDVFFVLQSCCRRAASTAS 476
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GATSL+ +EYQ+ALQ
Sbjct: 477 INSVLAVLGGATSLLSNEYQEALQ 500
>ref|XP_008651465.1| conserved oligomeric Golgi complex subunit 4 [Zea mays]
gb|ONL94093.1| Pentatricopeptide repeat-containing protein mitochondrial [Zea mays]
Length = 760
Score = 82.8 bits (203), Expect = 8e-13
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = +2
Query: 1181 FRVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIG 1360
++ L G Y++F+EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR S
Sbjct: 414 YKTEQDLTGFYVIFEEFFMVENVRKAIRIDEPISDGLTTSMVDDVFFVLQSCCRRAASTA 473
Query: 1361 GTQLMFAVRSGATSLMIHEYQKALQ 1435
+ AV GA SL+ +EYQ+ALQ
Sbjct: 474 SINSVLAVLGGAMSLLSNEYQEALQ 498
>dbj|BAD19993.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
Japonica Group]
dbj|BAD19930.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
Japonica Group]
dbj|BAH91672.1| Os02g0456000 [Oryza sativa Japonica Group]
dbj|BAS78524.1| Os02g0456000 [Oryza sativa Japonica Group]
Length = 561
Score = 82.0 bits (201), Expect = 1e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
++ L G Y++ +EFFM+E VR+A ID+ D L TS VDDVFFVLQ CR S
Sbjct: 416 KMVQDLTGFYVILEEFFMVENVRKAIRIDEPVPDGLTTSMVDDVFFVLQSCCRRAASTAS 475
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+FAV GA SL+ +EYQ+ALQ
Sbjct: 476 INSIFAVLGGAASLLSNEYQEALQ 499
>ref|XP_020572165.1| conserved oligomeric Golgi complex subunit 4 isoform X2 [Phalaenopsis
equestris]
Length = 757
Score = 82.4 bits (202), Expect = 1e-12
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +2
Query: 1184 RVPNQLIGSYLVFKEFFMLEYVREATAIDDQQEDSLMTSRVDDVFFVLQISCRNRTSIGG 1363
RV L G Y++ +EFFM+E VR+A ID+ DSL TS VDDVF+VLQ CR S G
Sbjct: 412 RVVQDLTGFYVILEEFFMVENVRKAINIDEHVPDSLTTSMVDDVFYVLQSCCRRAISTGS 471
Query: 1364 TQLMFAVRSGATSLMIHEYQKALQ 1435
+ + A+ SGA +L+ +EY+ ALQ
Sbjct: 472 SNSVLALLSGAINLLTNEYEDALQ 495