BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005852
         (2084 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ29559.1| putative nucleotidyltransferase, Ribonuclease H [...   914   0.0  
gb|PKA61057.1| putative mitochondrial protein [Apostasia shenzhe...   910   0.0  
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]   828   0.0  
ref|XP_018810895.1| PREDICTED: uncharacterized protein LOC108983...   845   0.0  
gb|PKA61678.1| putative mitochondrial protein [Apostasia shenzhe...   796   0.0  
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom...   797   0.0  
gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobrom...   766   0.0  
gb|OTG13256.1| putative reverse transcriptase domain-containing ...   786   0.0  
gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum]     780   0.0  
gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum]     775   0.0  
gb|PKU84723.1| putative mitochondrial protein [Dendrobium catena...   767   0.0  
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     783   0.0  
gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum]     756   0.0  
gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   750   0.0  
gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]     771   0.0  
gb|PKU81761.1| RNA-directed DNA polymerase [Dendrobium catenatum]     763   0.0  
gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum]     759   0.0  
gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum]     757   0.0  
gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]          743   0.0  
ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprot...   760   0.0  

>gb|PRQ29559.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 680

 Score =  914 bits (2363), Expect = 0.0
 Identities = 434/634 (68%), Positives = 516/634 (81%)
 Frame = -3

Query: 1929 LTDKVIFLGFVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIM 1750
            ++++VIFLGFVVSS G+ ADPEK+KAI +W EP++I +VRSFHGLATFYRRFI GFS+IM
Sbjct: 1    MSNEVIFLGFVVSSKGMQADPEKVKAIADWAEPKNIHEVRSFHGLATFYRRFIAGFSSIM 60

Query: 1749 APITDCLKNGEFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLS 1570
            API +C+K GEF+W+  A KAF+ IK +M+ APV+RLPDF+K FEV CDASGVGIGGVLS
Sbjct: 61   APIINCIKKGEFRWTTAAAKAFQEIKTRMINAPVMRLPDFTKPFEVTCDASGVGIGGVLS 120

Query: 1569 QESHPVAYFSEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINS 1390
            QE HP+AYFSEKLN+AK +YSTYDKEF+AV+Q+LR+WRHYLLPQEFV++SDHEAL+Y+NS
Sbjct: 121  QEGHPIAYFSEKLNEAKKKYSTYDKEFYAVVQSLRYWRHYLLPQEFVLYSDHEALRYLNS 180

Query: 1389 QKKLNNRHGRWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEY 1210
            QK+LN RH +W EF+Q+YT+ L+HK+GVENK ADA              V GF  LKEEY
Sbjct: 181  QKRLNPRHAKWAEFIQEYTFVLKHKSGVENKVADALSRRNSLLHIMSVEVAGFNNLKEEY 240

Query: 1209 ESCPDFHEIFSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGH 1030
             SCPDF  I+S L    ++    F+LQDG+LF   KLCIP TSVR++LI ELHAGG+AGH
Sbjct: 241  LSCPDFGRIYSALLEKQSKSTE-FVLQDGFLFKGTKLCIPCTSVRDFLILELHAGGIAGH 299

Query: 1029 FGNHKTIEAVEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDIS 850
            FG  KTI  VE RFYWPSLKRDVA++V RC TCQLAK ++QNTGLYTPLPVP+ PW+DIS
Sbjct: 300  FGRDKTIALVEDRFYWPSLKRDVAKVVERCRTCQLAKHKRQNTGLYTPLPVPHTPWQDIS 359

Query: 849  MDFVLGLPKTLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTI 670
            MDFVLGLPKT ++HDSI VVVDRFSKMAHF+PCSKTFDAS VAKL   E+V+LHGLPKTI
Sbjct: 360  MDFVLGLPKTTQRHDSIFVVVDRFSKMAHFLPCSKTFDASEVAKLFMDEVVRLHGLPKTI 419

Query: 669  VSDRDVKFTSYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDW 490
            VSDRDV+F SYFWKTLWH +GTKLK+SSA+HPQTDGQTEVVNRSLGNLLR+LVGE++R W
Sbjct: 420  VSDRDVRFMSYFWKTLWHMLGTKLKFSSAYHPQTDGQTEVVNRSLGNLLRSLVGEHIRSW 479

Query: 489  DLKLPTAEFAYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHD 310
            D  LP AEFAYNNS NRTIGMSP E VYG K + PIDLIPM    R S+SA+ FASHIH+
Sbjct: 480  DSILPIAEFAYNNSVNRTIGMSPFEAVYGHKLKAPIDLIPMTVSHRPSQSANEFASHIHE 539

Query: 309  LHKEISNKINQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPF 130
            LH +I+ +IN+SN  YK  AD+HR    F  GD+VMVR+RPERF  G  KKL AR  GPF
Sbjct: 540  LHAKINRRINRSNEQYKKAADVHRAFKEFSAGDFVMVRVRPERFSKGKAKKLQARSIGPF 599

Query: 129  EVLKRINDNAYVLNLPEGFGISPIFNIEDLVAYK 28
            +VL+++  NAYVL LP   GIS  FN+EDL+ Y+
Sbjct: 600  KVLQKVGTNAYVLELPPEMGISSTFNVEDLLPYR 633


>gb|PKA61057.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 829

 Score =  910 bits (2353), Expect = 0.0
 Identities = 431/684 (63%), Positives = 528/684 (77%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            LRPF+G FL+VYFDDILIY+++ ++H+DHLR+V  VLR+E+LY N KKC F+TD + FLG
Sbjct: 63   LRPFIGVFLIVYFDDILIYTRSMKEHLDHLREVFVVLRREKLYVNLKKCHFMTDSICFLG 122

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            F+VS  GVSADP KI AI+EWP P+SI DVRSFHGLATFYRRFIKGFS+I AP+TDCLK 
Sbjct: 123  FIVSCKGVSADPSKISAIQEWPTPKSIHDVRSFHGLATFYRRFIKGFSSITAPLTDCLKG 182

Query: 1722 GEFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYF 1543
             EF+W+  A +AF+ IK ++ EAPVLRLPDF KVFEVACDASGVGIGGVLSQE HP+AYF
Sbjct: 183  KEFQWASAADRAFREIKARLTEAPVLRLPDFGKVFEVACDASGVGIGGVLSQEGHPIAYF 242

Query: 1542 SEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHG 1363
            SEKLN+A+ RYSTYDKEF+AV+Q LR+WRHYL+  EFV++SDH+ALKY+NSQK L+ RH 
Sbjct: 243  SEKLNEARQRYSTYDKEFYAVVQTLRYWRHYLIAAEFVLYSDHQALKYLNSQKNLSARHA 302

Query: 1362 RWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEI 1183
            +W  FLQ+YT+ L+HKAG++NK ADA              V+GF+ +K EY  C DF   
Sbjct: 303  KWAAFLQEYTFVLKHKAGIDNKPADALSRMTVILHAMRVQVIGFDVMKSEYVDCKDFGST 362

Query: 1182 FSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEA 1003
            ++ L    ++  + +L+++GYLF   +LCIP++S+RE+LI ELH+ G AGHFG  KT   
Sbjct: 363  YTRLLKVPSQSDSDYLIREGYLFRGPRLCIPDSSLREFLIQELHSSGAAGHFGRDKTAAL 422

Query: 1002 VEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPK 823
            V  R+YWP   +DV R+V RC TCQ+AK  KQNTGLYTPLP+P+RPWED+SMDFVLGLP+
Sbjct: 423  VSDRYYWPRQLKDVTRVVSRCRTCQVAKGGKQNTGLYTPLPIPDRPWEDLSMDFVLGLPR 482

Query: 822  TLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFT 643
            T R+H  ILVVVDRFSKMAHFIPCSKT DAS +A L  +EIV+LHGLPK++VSDRDVKF 
Sbjct: 483  TSRRHGCILVVVDRFSKMAHFIPCSKTSDASHIATLFVAEIVRLHGLPKSMVSDRDVKFM 542

Query: 642  SYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEF 463
            SYFWKTLW ++GTKL YS+A+HPQTDGQTEVVNRSLGNLLR LVGE    WDL L  AEF
Sbjct: 543  SYFWKTLWKKLGTKLLYSTAYHPQTDGQTEVVNRSLGNLLRCLVGERPSSWDLILHVAEF 602

Query: 462  AYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKI 283
             YNNS NR+ GMSP  VV G+ PR PIDL+ +    R +E AS FASH+H+LH++I  K+
Sbjct: 603  TYNNSVNRSTGMSPFRVVTGYDPRLPIDLVDLPLTYRTNELASTFASHLHELHEDIRRKL 662

Query: 282  NQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDN 103
                   KA  D HR+   FE+G  VM+R+ P RFP G  KKL AR  GPF+VLK+I +N
Sbjct: 663  ALQYDKVKAEVDRHRRFTHFEVGSEVMIRVHPGRFPMGAQKKLAARRMGPFKVLKKIGEN 722

Query: 102  AYVLNLPEGFGISPIFNIEDLVAY 31
            AY L+LP   GISPIFN+ DL  Y
Sbjct: 723  AYELDLPLEMGISPIFNVSDLSPY 746


>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
          Length = 665

 Score =  828 bits (2140), Expect = 0.0
 Identities = 400/650 (61%), Positives = 494/650 (76%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            L+PF+GKFLVVYFDDILIYSK +E H+ HLRQV  +LR+E+LY N KK +F+T  ++FLG
Sbjct: 28   LQPFIGKFLVVYFDDILIYSKTEEDHVFHLRQVMRILRQEKLYINLKKYSFMTSAIMFLG 87

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            FVVS+ G+  DP+K+KAI EWP P +++++RSFHGL+TFYRRFI  FSTIMAPIT     
Sbjct: 88   FVVSAKGLEVDPDKVKAIVEWPIPSTLQELRSFHGLSTFYRRFIISFSTIMAPIT----- 142

Query: 1722 GEFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYF 1543
                    +TKAF+ IK+++ +APVL+LP+FSKVFEVAC+AS VGIG VLSQE HP+A+F
Sbjct: 143  -------GSTKAFEEIKERLTKAPVLQLPNFSKVFEVACNASNVGIGSVLSQEGHPIAFF 195

Query: 1542 SEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHG 1363
            S+KLN+AK +YS YDKEF+ V+Q L +WRHYLLP E V++SDHE LKY+NSQKKLN+ HG
Sbjct: 196  SKKLNEAKQKYSIYDKEFYIVVQXLCYWRHYLLPHESVLYSDHEPLKYVNSQKKLNHCHG 255

Query: 1362 RWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEI 1183
            +W  FLQ+Y++ +RHK+GVENKAA+A              VVGF+ LK +Y SC DF  I
Sbjct: 256  KWXSFLQEYSFVIRHKSGVENKAANALSXVVYILSSMAIQVVGFDLLKRDYNSCKDFSII 315

Query: 1182 FSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEA 1003
            +  L +G       F L DGYLF    LC+ + S+RE +IWELH+ G A HFG  KTI  
Sbjct: 316  YYALAAGTAGAYPNFXLHDGYLFKGTXLCLXDXSLREQVIWELHSRGXAXHFGRDKTIAM 375

Query: 1002 VEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPK 823
             E  FYWPSLKRDV + V +C TCQ +K RK+NTGLY PLPVP+ PW+++S+DFVLGLPK
Sbjct: 376  TEDHFYWPSLKRDVTKNVSKCRTCQPSKGRKKNTGLYMPLPVPHEPWQELSIDFVLGLPK 435

Query: 822  TLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFT 643
            T R+HDSI V+VDRFSKM HFIPCSKT DA  VAKL F EIV+LHGLPKTIVSD+D KF 
Sbjct: 436  TFRRHDSIFVMVDRFSKMVHFIPCSKTLDAVHVAKLFFKEIVRLHGLPKTIVSDQDAKFM 495

Query: 642  SYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEF 463
            SYFW++LW  + TKLK+SSAFHPQT+GQTEVVNRSLG+LLR LVGE++ +WD  LP AEF
Sbjct: 496  SYFWRSLWKMLNTKLKFSSAFHPQTEGQTEVVNRSLGDLLRCLVGEHVSNWDQILPMAEF 555

Query: 462  AYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKI 283
            AYN+S NR+ G SP E+V G  PR+PIDL+P+    R S  A AF+ HI DLHK++  KI
Sbjct: 556  AYNSSVNRSTGHSPFEIVTGLLPRKPIDLVPLPMEARPSVEADAFSKHILDLHKDVQRKI 615

Query: 282  NQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGP 133
              SN NYKA+ADL RKV  F+  D VMV IRPER+P G  KKLH++  GP
Sbjct: 616  ALSNENYKAQADLKRKVADFKERDMVMVWIRPERYPKGKYKKLHSKNVGP 665


>ref|XP_018810895.1| PREDICTED: uncharacterized protein LOC108983648 [Juglans regia]
          Length = 1496

 Score =  845 bits (2183), Expect = 0.0
 Identities = 403/592 (68%), Positives = 482/592 (81%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            LRPFMGKFLVVYFDDIL+YS+ +EQH+DHL Q                            
Sbjct: 775  LRPFMGKFLVVYFDDILVYSRTKEQHLDHLTQNS-------------------------- 808

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
              +SS GVS DP KI+AI  WPEP++I DVRSF+GLATFYRRFIKGFSTIMAPIT+C+K 
Sbjct: 809  --LSSTGVSVDPTKIQAIVGWPEPKTIHDVRSFYGLATFYRRFIKGFSTIMAPITECMKM 866

Query: 1722 GEFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYF 1543
            GEF+W+  ATKAFK +K++M EAPV+RLPDFSKVFEV CDASGVGIGGVLSQE HPVAYF
Sbjct: 867  GEFQWTSEATKAFKLVKKRMTEAPVMRLPDFSKVFEVECDASGVGIGGVLSQERHPVAYF 926

Query: 1542 SEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHG 1363
            SEKLNDAK RYSTYDKE +AV+QAL +WRHYLLPQEFV++SDHEAL+Y+NSQK+LN+RHG
Sbjct: 927  SEKLNDAKQRYSTYDKELYAVVQALSYWRHYLLPQEFVLYSDHEALRYLNSQKRLNSRHG 986

Query: 1362 RWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEI 1183
            RWVE+LQ Y++ L+H+ GVEN+AADA              V+GFE+LKEEYESC DF + 
Sbjct: 987  RWVEYLQAYSFALKHRKGVENQAADALSRRISFLSIMNVKVIGFERLKEEYESCLDFRDT 1046

Query: 1182 FSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEA 1003
            F  L+SG +   +GF L+DGY+F   KLCIP TSVR++++WE+HAGGLAGHFG  KTIE 
Sbjct: 1047 FLALQSGQSDTTDGFRLEDGYIFKTNKLCIPRTSVRDFIVWEVHAGGLAGHFGRDKTIEE 1106

Query: 1002 VEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPK 823
            +E +FYWPSLKRDVA++V  C+TCQLAKQ++QNTGLYTPLPVP+ P +D+SMDFVLGLP+
Sbjct: 1107 IERQFYWPSLKRDVAKIVSTCNTCQLAKQKRQNTGLYTPLPVPSCPSQDVSMDFVLGLPR 1166

Query: 822  TLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFT 643
            TL+K+DSI VVVDRFSKMAHFIPCSKT DA ++A+L F+EIVKL+GLPKTIVSDRDV+FT
Sbjct: 1167 TLKKYDSIFVVVDRFSKMAHFIPCSKTSDAYKIARLYFNEIVKLYGLPKTIVSDRDVRFT 1226

Query: 642  SYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEF 463
            S+F +TLWH VGTKLK+S+A+HPQTDGQTEVVN SLGNLLR LV ENLR+WDL LPTA+ 
Sbjct: 1227 SHFLRTLWHMVGTKLKFSTAYHPQTDGQTEVVNHSLGNLLRCLVQENLRNWDLILPTAQI 1286

Query: 462  AYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDL 307
            AYN+S NR+IGMS  EVV+G+KPR+P+DLIPM  +   S SA AF  H+HDL
Sbjct: 1287 AYNSSVNRSIGMSAFEVVHGYKPRKPLDLIPMSPHAHVSVSAEAFVQHLHDL 1338


>gb|PKA61678.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 644

 Score =  796 bits (2056), Expect = 0.0
 Identities = 372/581 (64%), Positives = 466/581 (80%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            +PF+G FLVVYFDDILIYS+++  H+ HLRQV +VLR+E++Y N KKC F+T  V+FLGF
Sbjct: 64   KPFLGTFLVVYFDDILIYSRSRSDHLSHLRQVMDVLRREKMYINLKKCFFMTPSVVFLGF 123

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            +VS  GVSADPEKI+AI+EWP P S+ +VRSFHGLATFYRRFI+GFSTI APIT+CLK G
Sbjct: 124  IVSENGVSADPEKIRAIQEWPMPTSLTEVRSFHGLATFYRRFIRGFSTITAPITNCLKKG 183

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
            E KW+  ATKAF+ IK ++ EAPVLRLPDF+KVFEVACDASGVGIGGVLSQE HP+A+FS
Sbjct: 184  ELKWTDAATKAFETIKARLTEAPVLRLPDFAKVFEVACDASGVGIGGVLSQEGHPIAFFS 243

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKLNDA+ RYSTYD+EF+A++Q+LR+WRHYLLP+EF+++SDH+ALKY+++QKKL+ RH +
Sbjct: 244  EKLNDARQRYSTYDREFYAIVQSLRYWRHYLLPKEFILYSDHQALKYLSTQKKLSARHAK 303

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            WVEFLQ+YT+ L+H++GVENK ADA              V GFE+L  +Y +CPDF EIF
Sbjct: 304  WVEFLQEYTFVLKHRSGVENKPADALSRMAVLLHMMSVQVTGFERLSSDYPNCPDFGEIF 363

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
            + L    T     +LL+DG+LF   +LC P +S+R+YLI E+++GGLAGHFG  KT+  +
Sbjct: 364  TSLSKDPTTRNPDYLLKDGHLFKGTRLCEPQSSLRDYLIHEIYSGGLAGHFGRDKTMAII 423

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
            + RFYWPSL+RDVA +V  C  CQ AK   +  G YTPLP+P++PWED+SMDFVLGLP+T
Sbjct: 424  QDRFYWPSLRRDVAHVVSHCRVCQTAKSSYKRAGPYTPLPIPHKPWEDLSMDFVLGLPRT 483

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
            +R H SILVVVDRFSKM HFIP SKT DAS VA L F EI++LHGLPKT+VSDRD +F S
Sbjct: 484  VRGHYSILVVVDRFSKMTHFIPSSKTSDASHVASLFFREIIRLHGLPKTMVSDRDTQFVS 543

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            YF KTLW+++GTKL +S+ +HP TDGQTEVVNRSLG+LLR LVG++   WDL L  AEFA
Sbjct: 544  YFLKTLWNKMGTKLLFSTVYHPHTDGQTEVVNRSLGDLLRCLVGDHTSSWDLVLLMAEFA 603

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESA 337
            YN+S NR+ GMSP  +V G++PR+PIDLI +    R SE A
Sbjct: 604  YNSSVNRSTGMSPFMIVTGYEPRKPIDLIELPVSYRTSEFA 644


>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  797 bits (2059), Expect = 0.0
 Identities = 383/688 (55%), Positives = 490/688 (71%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            L+PF+  F+VVYFDDILIYS  +E+H+ HLRQV EVL+KEQLY N KKC+F+  +V+FLG
Sbjct: 682  LKPFLNSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLG 741

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            F+VS+ G+  DPEKI+AI EWP P SI++VRSFHGLA+FYRRFI+ FS+IM+PIT+ LK 
Sbjct: 742  FIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKK 801

Query: 1722 GEFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYF 1543
              F+WS +A KAF+ +K  M EAPVL LPDF K+F V CDAS VGIG VLSQ+  P+ +F
Sbjct: 802  DGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFF 861

Query: 1542 SEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHG 1363
            SEKL D++ RYSTYD EF+A+++A+RHW+HYL  +EF ++SDH+AL+Y++SQKKL+N+H 
Sbjct: 862  SEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHA 921

Query: 1362 RWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEI 1183
            +W  FL ++ ++L++K+G  N  ADA            T V GFE+LK +Y S   F +I
Sbjct: 922  KWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKI 981

Query: 1182 FSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEA 1003
             + L+     E   + L + YLF   +LCIP  S+RE +I ELH  GL GHFG  KT+  
Sbjct: 982  IADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLVM 1041

Query: 1002 VEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPK 823
            V  R+YWP ++RDV RLV RC  C   K   QNTGLY PLP P+ PW  +SMDFVLGLPK
Sbjct: 1042 VADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPK 1101

Query: 822  TLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFT 643
            T +  DSI VVVDRFSKMAHFIPC +T DA+ +A+L F EIV LHG+P +IVSDR VKF 
Sbjct: 1102 TTKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVILHGIPTSIVSDRHVKFM 1161

Query: 642  SYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEF 463
             YFW+TLW + GT+LKYSS  HPQTDGQTEVVNRSLGN+LR L+  N + WDL +P AEF
Sbjct: 1162 GYFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEF 1221

Query: 462  AYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKI 283
            AYNNS NR+I  +P E  YG KP+  +DL+P+ Q  R S     FA  I  +H+E+   +
Sbjct: 1222 AYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADQIRKIHEEVKAAL 1281

Query: 282  NQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDN 103
              SNA Y   A+ HR+   FE GD V+V +R ERFP GT  KL +R  GP +VLK+I+ N
Sbjct: 1282 KASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKISSN 1341

Query: 102  AYVLNLPEGFGISPIFNIEDLVAYKGLD 19
            AY++ LP    I+PIFNI DL  + G D
Sbjct: 1342 AYLIELPPELQINPIFNILDLYPFDGCD 1369


>gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 786

 Score =  766 bits (1978), Expect = 0.0
 Identities = 365/653 (55%), Positives = 469/653 (71%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            L+PF+  F+VVYFDDILIYS  +E+H+ HLRQV EVL+KEQLY N KKC+F+  +V+FLG
Sbjct: 134  LKPFLNSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLG 193

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            F+VS+ G+  DPEKI+AI EWP P SI++VRSFHGLA+FYRRFI+ FS+IM+PIT+ LK 
Sbjct: 194  FIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKK 253

Query: 1722 GEFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYF 1543
              F+WS +A KAF+ +K  M EAPVL LPDF K+F V CDAS VGIG VLSQ+  P+ +F
Sbjct: 254  DGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFF 313

Query: 1542 SEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHG 1363
            SEKL D++ RYSTYD EF+A+++A+RHW+HYL  +EF ++SDH+AL+Y++SQKKL+N+H 
Sbjct: 314  SEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHA 373

Query: 1362 RWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEI 1183
            +W  FL ++ ++L++K+G  N  ADA            T V GFE+LK +Y S   F +I
Sbjct: 374  KWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKI 433

Query: 1182 FSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEA 1003
             + L+     E   + L + YLF   +LCIP  S+RE +I ELH  GL GHFG  KT+  
Sbjct: 434  IADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAM 493

Query: 1002 VEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPK 823
            V  R+YWP ++RDV RLV RC  C   K   QNTGLY PLP P+ PW  +SMDFVLGLPK
Sbjct: 494  VADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPK 553

Query: 822  TLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFT 643
            T +  DSI VVVDRFSKMAHFIPC +T +A+ +A+L F EIV+LHG+P +IVSDRDVKF 
Sbjct: 554  TAKGFDSIFVVVDRFSKMAHFIPCFRTSNATHIAELFFREIVRLHGIPTSIVSDRDVKFM 613

Query: 642  SYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEF 463
             +FW+TLW + GT+LKYSS  HPQTDGQTEVVNRSLGN+LR L+  N + WDL +P AEF
Sbjct: 614  GHFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEF 673

Query: 462  AYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKI 283
            AYNNS NR+I  +P E  YG KP+  +DL+P+ Q  R S     FA HI  +H+E+   +
Sbjct: 674  AYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADHIRKIHEEVKAAL 733

Query: 282  NQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEV 124
              SNA Y   A+ HR+   FE GD V+V +R ERFP GT  KL +R  GP +V
Sbjct: 734  KASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKV 786


>gb|OTG13256.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 1444

 Score =  786 bits (2030), Expect = 0.0
 Identities = 371/680 (54%), Positives = 494/680 (72%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            +  +G  +VVYFDDIL++S++  QH+ HLRQV  +LR ++LYAN  KC FL+ +V+FLG+
Sbjct: 735  KALIGHCVVVYFDDILVFSQDIRQHLLHLRQVFTILRDQKLYANRAKCHFLSPEVLFLGY 794

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            ++S  G+  D  K++AI  WP P SI +VRSFHGLA+FYRRFIK FS+I+APIT+CLK  
Sbjct: 795  LISENGIRMDESKVEAITAWPTPTSIHEVRSFHGLASFYRRFIKNFSSIVAPITNCLKGN 854

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
             F W+  AT AF+ +K+++ +APVL LP+F   F+V CDASG GIGGVLSQ + P+A+FS
Sbjct: 855  NFAWTPAATIAFEELKKRVTQAPVLALPNFQLPFQVECDASGFGIGGVLSQANRPIAFFS 914

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKL++AK +YSTYDKEF+A+I++L +WRHYLLP EFV++SDH+AL++IN Q KLN RH +
Sbjct: 915  EKLSEAKQKYSTYDKEFYAIIRSLEYWRHYLLPGEFVLYSDHQALRFINGQHKLNPRHAK 974

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            WVE+LQ++++ +RHKAG  N  ADA              V GF+  +  Y   PDF E +
Sbjct: 975  WVEYLQEFSFVIRHKAGTSNTVADALSRRRALLTSLQLQVEGFDIFRGLYVDDPDFSEAW 1034

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
               KS  T    G+ +QDG+LF   +LC+P  S+R+ +I E H GGLAGHFG  KT++ V
Sbjct: 1035 ---KSCQTAPTKGYSVQDGFLFRSNQLCVPKCSLRDAIILESHQGGLAGHFGRGKTLKFV 1091

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
            + RFYWP +  DVAR++ RC TC +AK +  N GLYTPLPVPN PWED+S+DFV+GLP+T
Sbjct: 1092 QERFYWPKMSTDVARVIDRCRTCHVAKTQHSNAGLYTPLPVPNGPWEDVSLDFVVGLPRT 1151

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             R+ DSI+VVVDRFSKM+HF+PCSKT+DAS+VA+L F+EIVKLHG+PK++ SDRDVKF  
Sbjct: 1152 QRQKDSIMVVVDRFSKMSHFVPCSKTYDASQVARLYFAEIVKLHGVPKSLTSDRDVKFVG 1211

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            +FW+TLW ++G++L +SSA HPQ+DGQTEV NRSLGNLLR+LVG N R WD+ LP AEFA
Sbjct: 1212 HFWRTLWKRLGSRLHFSSAHHPQSDGQTEVTNRSLGNLLRSLVGNNPRQWDIVLPQAEFA 1271

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            YN ST+R+ GMSP  VVYG  P  P+DL P+      S      ++ I  +HK++  +I 
Sbjct: 1272 YNRSTHRSTGMSPFLVVYGRNPFTPLDLAPLPTTEHFSVEGEERSAQIKMIHKQVREQIE 1331

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
             +N  Y+ RA++HR+   F  GD V + +   RFP G   KL  R  GPF VLKRINDNA
Sbjct: 1332 NNNIVYQRRANVHRRRVVFNEGDLVWIHLSKARFPGGRFGKLQPRADGPFRVLKRINDNA 1391

Query: 99   YVLNLPEGFGISPIFNIEDL 40
            Y ++LP  + +S  FN+ DL
Sbjct: 1392 YKIDLPGHYNVSATFNVADL 1411


>gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1278

 Score =  780 bits (2015), Expect = 0.0
 Identities = 371/691 (53%), Positives = 485/691 (70%)
 Frame = -3

Query: 2073 FMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGFVV 1894
            ++GKF++VYFDDIL+YS +   H+ HLRQV E+LR++ LY +PKKC FL  K+ FLGFV+
Sbjct: 578  YLGKFVIVYFDDILVYSPDFRSHLQHLRQVMEILRQQTLYCHPKKCQFLNHKIQFLGFVL 637

Query: 1893 SSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNGEF 1714
            S+ G+  DPEK+ AI  WP P S+ DVR FHGLA+FYRRFI  FST+ AP+T+ LK+  F
Sbjct: 638  SANGIEVDPEKVTAIVSWPVPHSLTDVRRFHGLASFYRRFIANFSTVAAPMTELLKSDSF 697

Query: 1713 KWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFSEK 1534
             W+K A  +F+ +K+KM  APVLRLPDF  VF+V CDAS VGIG VLSQE  PVAYFSEK
Sbjct: 698  CWTKTAQNSFEQLKEKMTTAPVLRLPDFHNVFQVDCDASNVGIGAVLSQEGQPVAYFSEK 757

Query: 1533 LNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGRWV 1354
            LN+A+ +YSTYDKEF+A+++AL HW HYLL +EFV+F+DH ALK+++SQKKL  RH  W 
Sbjct: 758  LNEARQKYSTYDKEFYAIVRALHHWSHYLLCREFVLFTDHAALKFLDSQKKLRGRHATWS 817

Query: 1353 EFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIFSL 1174
            E L  + + L+HK+G  N+ ADA            + V+GFE +KE Y +  DF  ++ L
Sbjct: 818  ESLAAFQFVLKHKSGKLNQVADALSRRHVLLQVLQSKVIGFENIKEMYATDVDFQGVWKL 877

Query: 1173 LKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAVEH 994
             +  +  + +   ++DG+LF    LCIP  S+R  LI E H  G+AGHFG  KT+  ++ 
Sbjct: 878  CQDSSHLQYH---IKDGFLFFRTCLCIPRGSIRLVLISECHDSGMAGHFGRDKTLSLIKE 934

Query: 993  RFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKTLR 814
            +FYWP++ +DV R V  C  C+ AK    N GLY PLPVP+ PWED+SMDFVLGLP T R
Sbjct: 935  KFYWPAIHKDVNRYVRGCRICKRAKTPGTNAGLYLPLPVPSGPWEDVSMDFVLGLPHTQR 994

Query: 813  KHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTSYF 634
              DSI+VVVDRFSKMAHF+ C+KT DA+ +  L F EIV+LHG+PKTI SDRDVKF S+F
Sbjct: 995  NKDSIMVVVDRFSKMAHFVACNKTLDATHIGDLYFREIVRLHGIPKTITSDRDVKFLSHF 1054

Query: 633  WKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFAYN 454
            WKTLW ++GT+L++SS  HPQTDGQTE +NRSLGNLLR  VG+N+R WDL L   EFA+N
Sbjct: 1055 WKTLWGKLGTRLQFSSVAHPQTDGQTETINRSLGNLLRCFVGKNVRQWDLILAQVEFAFN 1114

Query: 453  NSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKINQS 274
             S N T G SP E+VYG  P  PIDLIP+      S      +  I +LHK++  +I + 
Sbjct: 1115 RSINHTTGRSPFEIVYGHNPLSPIDLIPIANVSAYSTDGEQRSVEIKNLHKQVQEEIARQ 1174

Query: 273  NANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNAYV 94
            NA Y+ +A+ HRK  +F+ GD V +R+R ERFPPG   KL  +  GPF +LK+INDNAY 
Sbjct: 1175 NAKYQRQANKHRKFVQFKEGDLVWIRLRKERFPPGPFGKLKPKADGPFRILKKINDNAYQ 1234

Query: 93   LNLPEGFGISPIFNIEDLVAYKGLDFNPSNP 1
            ++LP  + +S +FN+ DL  +   D   S+P
Sbjct: 1235 IDLPGDYNVSAVFNVADLTPH--YDIEESSP 1263


>gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1277

 Score =  775 bits (2002), Expect = 0.0
 Identities = 366/687 (53%), Positives = 487/687 (70%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            +PF+ KF+++YFDDIL+YS +   H+ HLRQV +VL++++LY +P+KC FL  ++ FLGF
Sbjct: 587  QPFLCKFVIIYFDDILVYSSDCHSHLQHLRQVFQVLKEQRLYCHPQKCHFLGKRIKFLGF 646

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            ++S AG+  DPEKI+AI  WP PQS  DVR FHGLA+FYRRFI+ FST+ AP+T+ LK  
Sbjct: 647  ILSVAGIEVDPEKIEAIVSWPTPQSFTDVRRFHGLASFYRRFIQNFSTLAAPLTELLKTD 706

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
            +F W+K A  +F+ +K+K+   PVLRLPDF+K+F+V CDAS VGIG VLSQE  PVAYFS
Sbjct: 707  KFLWTKEAEFSFEHLKEKVTTTPVLRLPDFNKLFQVDCDASNVGIGAVLSQEDQPVAYFS 766

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKLND++ +YSTYDKEF+A+++AL HW HYLL +EF++F+DH ALK++NSQKKL  RH  
Sbjct: 767  EKLNDSRQKYSTYDKEFYAIVRALHHWSHYLLSKEFILFTDHAALKFLNSQKKLRGRHAM 826

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            W E L  + + L+HK+G +N+ ADA              + GF+ ++E Y    DF +I+
Sbjct: 827  WAESLAAFHFVLKHKSGKQNQVADALSRRHVLVQEIQAKLTGFDYIREMYAEDVDFRDIW 886

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
               +S A +    + ++DG+LF    +C+P  S+R  LI E H GGLAGHFG  KT+  V
Sbjct: 887  EKCQSQAYQF---YQIRDGFLFFHNCICVPRGSIRIALISECHDGGLAGHFGRDKTLALV 943

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
            + +FYWP++ +DV R V  C  C+ AK    N GLY PLPVP  PWED+SMDFVLGLP+T
Sbjct: 944  KEKFYWPAMPKDVGRYVKGCRICRQAKTTGTNAGLYLPLPVPQNPWEDVSMDFVLGLPRT 1003

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             R  DSI+VVVDRFSKMAHF+ C+KT DA+ +  L F EIV+LHG+PKTI SDRDVKF S
Sbjct: 1004 QRNKDSIMVVVDRFSKMAHFVACNKTLDATHIGDLYFQEIVRLHGIPKTITSDRDVKFLS 1063

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            +FWKTLW ++GT+L++SS  HPQTDGQTE VNRSLGNLLR  VG+NLR WDL L   EFA
Sbjct: 1064 HFWKTLWGKLGTRLQFSSVAHPQTDGQTENVNRSLGNLLRCFVGKNLRQWDLILGQVEFA 1123

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            +N S N T   SP E+VYG  P  P+DLIP+      S      +  I +LHK++  +I 
Sbjct: 1124 FNRSPNNTTRRSPFEIVYGSNPLTPLDLIPILNSSSYSLDGEQRSIEIKELHKQVQAEII 1183

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
            + N+ Y+ RA+ HRK  +F  GD V +R+R ERFPPG+  KL  +  GPF V+K+INDNA
Sbjct: 1184 KQNSKYQTRANKHRKSVQFNEGDLVWIRLRKERFPPGSFGKLKPKAEGPFRVIKKINDNA 1243

Query: 99   YVLNLPEGFGISPIFNIEDLVAYKGLD 19
            Y ++LP  + +S +FN+ DL  +  L+
Sbjct: 1244 YQIDLPGDYNVSAVFNVADLTPHFELE 1270


>gb|PKU84723.1| putative mitochondrial protein [Dendrobium catenatum]
          Length = 1067

 Score =  767 bits (1981), Expect = 0.0
 Identities = 366/683 (53%), Positives = 477/683 (69%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            RP M K +V+YFDDIL+YS + + H++HLR V ++LR++QL+ANPKKC +LTDK+ FLGF
Sbjct: 377  RPLMNKCVVIYFDDILVYSSSVDLHLEHLRSVLDLLREQQLFANPKKCQYLTDKISFLGF 436

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            ++SSAG+ ADP KI+AI +WP P+S+ +VR FHGLA+FYRRFI+ FS++ AP+T+ LK+ 
Sbjct: 437  IISSAGIEADPHKIEAIVQWPTPRSMTEVRQFHGLASFYRRFIRNFSSVAAPLTELLKSE 496

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
             F+W+ +A + F+ +K+ +  APVL LPDF+K FE+ CDAS VGIG VLSQ  HP+A+FS
Sbjct: 497  PFQWNPSAKEGFERLKEAISTAPVLALPDFNKAFEIDCDASNVGIGAVLSQHGHPIAFFS 556

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EK ND++ +YS YDKE +AV++AL HW HYLLP EF+++SDHEAL ++NSQKKL  RH  
Sbjct: 557  EKFNDSRRKYSVYDKELYAVVRALHHWSHYLLPHEFILYSDHEALCFLNSQKKLKGRHAA 616

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            WVEFL  + Y L+HK+G  N+ ADA            T V+ FE LKE Y +  DF EI+
Sbjct: 617  WVEFLGAFHYVLKHKSGKCNQVADALSRRTALIQVLQTKVIEFELLKELYPADSDFGEIW 676

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
            S  +    +    +  Q G+LFH  KLCIP  S R  +I E H   +A HFG  KT+  +
Sbjct: 677  SKCQE---KPYKLYHCQQGHLFHGNKLCIPQGSTRLAIIRECHESSIADHFGRDKTLALI 733

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
            +  F+WP L RDV R + RC  C LAK   Q  GLYTPLPVP  PW ++S+DFVLGLP+T
Sbjct: 734  QEHFFWPLLSRDVDRFLRRCRVCVLAKTHSQKLGLYTPLPVPEGPWLEVSLDFVLGLPRT 793

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             R  DSI+VVVDRFSKM HFI C+KT DAS VA L F EIV+LHG+PKTI SDRDVKF S
Sbjct: 794  QRNKDSIMVVVDRFSKMTHFIACNKTLDASHVADLYFKEIVRLHGIPKTITSDRDVKFLS 853

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            +FW+T+W ++GTKL +SS  HPQTDGQTE VNRSLGNLLR  VG+NL+ WDL LP  EFA
Sbjct: 854  HFWRTIWAKLGTKLLFSSTAHPQTDGQTETVNRSLGNLLRCFVGKNLKQWDLILPQIEFA 913

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            +N S N+  G SP +VVYG  P  P++LIP     + S      +  I  LHKE+ + I 
Sbjct: 914  FNRSINQATGHSPFQVVYGNNPLSPLELIPQLPTQKFSTDGVQRSKEIQRLHKEVQDLIQ 973

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
            + N+  +  A+  R+   FE+GD V +R+R ERFP G   KL  +  GPF ++K+I DNA
Sbjct: 974  KHNSKCQKLANRSRRAMHFEVGDQVWIRLRKERFPQGAFSKLKPKADGPFRIVKKIGDNA 1033

Query: 99   YVLNLPEGFGISPIFNIEDLVAY 31
            Y ++LP  + IS  FN+ DL  Y
Sbjct: 1034 YQIDLPGDYNISATFNVADLSPY 1056


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  783 bits (2023), Expect = 0.0
 Identities = 383/694 (55%), Positives = 489/694 (70%), Gaps = 1/694 (0%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            LR F+GKF+VVYFDDILIYSK  E+H+ H++QV +VLRKEQLYAN +KCTF TD+V+FLG
Sbjct: 862  LRAFIGKFVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLG 921

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            FVVS  G+  D  K+KAI++WP P+++  V+SF GLA FYRRF++GFSTI AP+ +  K 
Sbjct: 922  FVVSGLGIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKK 981

Query: 1722 G-EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAY 1546
            G  F+W +   KAF+ +K+++ E P+L LPDF+K FEV CDASG+GIGGVL Q   PVAY
Sbjct: 982  GVAFQWGEPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAY 1041

Query: 1545 FSEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRH 1366
            FSEKL  A+L YS YDKE +A+++AL  W+HYL P+EFVI SDHEALKY+  Q KLN RH
Sbjct: 1042 FSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRH 1101

Query: 1365 GRWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHE 1186
             +WVEF++ + Y +++K G EN  ADA              V G E +KE Y +  DF E
Sbjct: 1102 AKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSE 1161

Query: 1185 IFSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIE 1006
             ++   +G   E   + + DG+LF   KLC+P+ SVR  L+ E HAGGL GHFG  KT +
Sbjct: 1162 PYAKCTAGKGWE--KYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYD 1219

Query: 1005 AVEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLP 826
             +   FYWP ++RDV RLV RC TC  AK +    GLYTPLPVP+ PWEDISMDFVLGLP
Sbjct: 1220 MLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLP 1279

Query: 825  KTLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKF 646
            +T R  DSI VVVDRFSKMAHFIPC K+ DAS +A L FSEIV+LHG+PKTIVSDRD KF
Sbjct: 1280 RTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKF 1339

Query: 645  TSYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAE 466
             SYFWKTLW ++GT+L +S+  HPQTDGQTEVVNR+L  LLR L+ +NL++W+  LP  E
Sbjct: 1340 LSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVE 1399

Query: 465  FAYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNK 286
            FAYN + + T  M P EVVYGFKP  PIDL+P+    R+   AS  A+++  +H++    
Sbjct: 1400 FAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEA 1459

Query: 285  INQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRIND 106
            I + +  Y A A+ +RK   FE GD V V +R +RFP     KL  RG GPF VL +IND
Sbjct: 1460 IEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKIND 1519

Query: 105  NAYVLNLPEGFGISPIFNIEDLVAYKGLDFNPSN 4
            NAY + LPE +G+S  FN+ DL  + GL+ + S+
Sbjct: 1520 NAYKIELPEDYGVSSTFNVADLTPFFGLEDSESS 1553


>gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 944

 Score =  756 bits (1953), Expect = 0.0
 Identities = 365/683 (53%), Positives = 478/683 (69%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            +PF+ KF+VVYFDDILI+S+N E+H+ H+R V   LR+++LY +  K  FL  K+ FL F
Sbjct: 254  QPFLCKFVVVYFDDILIFSENIEEHLQHIRLVLCKLREQKLYGHIGKSKFLDSKIEFLCF 313

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            VVS +G+ ADP KI+AI  WP PQS  +VR FHGLA+FYRRFIK FS+I APIT+ LK+ 
Sbjct: 314  VVSVSGIEADPRKIEAIVSWPTPQSFTEVRRFHGLASFYRRFIKNFSSIAAPITESLKSE 373

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
             F WS +A  +F+ +K+ +  +PVL LPDF+KVFEV CDAS VGIG VLSQ+ HP+A+FS
Sbjct: 374  SFVWSSSAQSSFELLKKAVTTSPVLNLPDFNKVFEVECDASNVGIGAVLSQDGHPIAFFS 433

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKLN+A+ +YSTYDKEF+A+++AL HW HYLL ++FV+++DHEAL+Y+NSQKKL  RH  
Sbjct: 434  EKLNEARQKYSTYDKEFYALVRALHHWNHYLLAKDFVLYTDHEALRYLNSQKKLKGRHAA 493

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            W EFL  + Y ++HKAG  N+AADA            T V+G E  K+ Y    DF  I+
Sbjct: 494  WSEFLASFNYVIKHKAGHLNQAADALSRCHLLLQTLQTKVLGMENFKDLYSVDADFKLIW 553

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
            +       +    F ++DGYLFH   LCIP  S R  +I E H GGL GHFG  KT+  +
Sbjct: 554  NQCLH---QPYKLFHIKDGYLFHGHSLCIPRGSNRLAIITEFHEGGLMGHFGRDKTLNLI 610

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
            + +FYWP L RDV R V  C  C++AK +  N GLY+PLPVP  PWED+S+DFVLGLP+T
Sbjct: 611  QEKFYWPLLSRDVGRYVQGCRVCRMAKTQGTNAGLYSPLPVPKAPWEDVSLDFVLGLPRT 670

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             R  DSI+VVV+RFSKMAHF+ C KT DAS +A L   EIV+++G+P TI SDRD+KF S
Sbjct: 671  QRNKDSIMVVVNRFSKMAHFVACHKTLDASHIANLYLKEIVRIYGIPMTITSDRDIKFMS 730

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            YFWKTLW ++GT+L+YSSA HPQTDGQTEVVNRSLGNLLR  V  N++ WDL L   EFA
Sbjct: 731  YFWKTLWSKLGTRLQYSSAAHPQTDGQTEVVNRSLGNLLRCFVRRNIKQWDLILAQIEFA 790

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            +N S N++   SP E+VYG  P  P+DLIP+ Q    +      +  I  LH+++ ++I 
Sbjct: 791  FNRSVNQSTRRSPFEIVYGRNPLTPLDLIPIVQQTAYNLDGEQRSKEIQKLHQQVQDEII 850

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
            + N  Y+A+A+ HRK   ++ GD V +R+R ERFP     KL  R  GPF V+KRINDNA
Sbjct: 851  KQNEKYRAQANRHRKKVIYQEGDLVWIRLRKERFPAKAFSKLKPRADGPFRVVKRINDNA 910

Query: 99   YVLNLPEGFGISPIFNIEDLVAY 31
            Y+++LP  + I  +FN+ DL  +
Sbjct: 911  YLIDLPGDYNILAVFNVADLTPH 933


>gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 797

 Score =  750 bits (1937), Expect = 0.0
 Identities = 368/690 (53%), Positives = 477/690 (69%), Gaps = 2/690 (0%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            L+ F+GK +VVYFDDILIYS N + H++HL  V  VLRKE+L+AN +KCTF TD V+FLG
Sbjct: 90   LKEFLGKCVVVYFDDILIYSTNFDLHVEHLSAVMNVLRKEKLFANIEKCTFCTDHVVFLG 149

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            FVVSS GV  D EKI+AI+EWP P+++ +VRSFHGLA+FYRRF+K FST+ AP+ + +K 
Sbjct: 150  FVVSSKGVQVDEEKIRAIQEWPTPKNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVKK 209

Query: 1722 GE-FKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAY 1546
               FKW +   KAF  +K K+  AP+L LP+F+K FE+ CDAS VGIG VL QE HP+AY
Sbjct: 210  HVGFKWGEKQEKAFSELKHKLTNAPILALPNFAKSFEIECDASNVGIGAVLMQEGHPIAY 269

Query: 1545 FSEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRH 1366
            FSEKLN A L Y TYDKE +A+++ALR W+HYLLP+EFVI SDHE+LKY+  Q KLN RH
Sbjct: 270  FSEKLNGAALNYPTYDKELYALVRALRTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRH 329

Query: 1365 GRWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHE 1186
             +WVEFL+ + Y ++HK G  N  ADA            T + G E LK+ Y    DF E
Sbjct: 330  AKWVEFLEQFPYVIKHKKGKGNVVADALSRRHNLLSMLETKLFGLESLKDMYMHDVDFAE 389

Query: 1185 IFSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIE 1006
             F+  +  +    NG+   +G+LF   +LC+P  S+RE L+ E H GGL GHFG  KT+E
Sbjct: 390  NFAACEKFSE---NGYYRHNGFLFKANRLCVPKCSIRELLVSESHEGGLMGHFGVQKTLE 446

Query: 1005 AVEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLP 826
             ++  FYWP +K DV +    C  C+ AK + +  GLYTPLPVP+ PW DISMDFVLGLP
Sbjct: 447  ILQEHFYWPHMKHDVHKFCDHCIVCKKAKSKVKPHGLYTPLPVPDFPWIDISMDFVLGLP 506

Query: 825  KTLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKF 646
            +T    DSI VVVDRFSKMAHFIPC K  DA  VA L F E+V+LHGLP++IVSDRD KF
Sbjct: 507  RTKNGKDSIFVVVDRFSKMAHFIPCKKVNDACHVADLFFREVVRLHGLPRSIVSDRDTKF 566

Query: 645  TSYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAE 466
             S+FW+TLW ++GTKL +S+  HPQTDGQTEVVNR+LG LLRT++ +N++ W+  LP  E
Sbjct: 567  LSHFWRTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKKNIKFWEEHLPHVE 626

Query: 465  FAYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVR-ASESASAFASHIHDLHKEISN 289
            FAYN + + T   SP E+VYGF P  P+DL+PM        + A A A ++  LH+++  
Sbjct: 627  FAYNRAVHSTTKCSPFEIVYGFNPLTPLDLLPMPNISEFKHKDAQAKAEYVKKLHEQVKA 686

Query: 288  KINQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRIN 109
            +I +   +Y  +A+  RK   FE GD+V V +R ERFP     KL  RG GPF+VL++IN
Sbjct: 687  QIEKKIESYVKQANKGRKKVIFEPGDWVWVHMRKERFPEQRKSKLQPRGDGPFQVLEKIN 746

Query: 108  DNAYVLNLPEGFGISPIFNIEDLVAYKGLD 19
            DNAY ++LP  +G+S  FN+ DL  +   D
Sbjct: 747  DNAYKIDLPGEYGVSSSFNVADLTHFDAGD 776


>gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1459

 Score =  771 bits (1991), Expect = 0.0
 Identities = 370/680 (54%), Positives = 478/680 (70%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            R ++ KFLV+YFDDILIYS+N E+H+ HL+QV  VL ++ L+AN  KC FL D + FLGF
Sbjct: 746  RSYLNKFLVIYFDDILIYSQNMEEHLQHLKQVFLVLLEQHLFANTTKCEFLVDTIKFLGF 805

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            V+S  G+  D +K+KAI  WP P SI DVR FHGLA+FYRRFI+ FS + AP+T+ LK  
Sbjct: 806  VISPTGLEMDFDKVKAIHGWPTPTSINDVRRFHGLASFYRRFIQNFSMVAAPLTEILKRP 865

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
            +F+W+K A ++F  +K  M  APVL LP+FSKVFEV CDAS  GIG VLSQE HPVAYFS
Sbjct: 866  QFEWTKAAQESFDQLKDLMQRAPVLTLPNFSKVFEVECDASQNGIGAVLSQEGHPVAYFS 925

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKLN+++ +YS YDKEF+A+++AL++W HYLL QEF++F+DH++LK++  Q KLN RH +
Sbjct: 926  EKLNESRQKYSIYDKEFYAIVRALQYWSHYLLGQEFILFTDHQSLKHLQYQSKLNTRHAK 985

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            WVE+L  + Y+L++K+G  N+ ADA               VGFE +K+ YE  PDF +I+
Sbjct: 986  WVEYLSSFHYSLKYKSGTTNQVADALSRRHMLLNTLQVKTVGFEIIKDLYEKDPDFAKIW 1045

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
             L      +    F L+  YLF   KLCIP  S+RE +I+E H GGLAGHFG  KT+  +
Sbjct: 1046 QLC---LLKPYKFFHLEQKYLFKGNKLCIPQGSLREAIIFENHNGGLAGHFGRDKTLALI 1102

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
               FYWPSL++DV R + RCH C++AK  + NTGLY PLPVP  PW D+SMDFVLGLP T
Sbjct: 1103 HENFYWPSLEKDVTRHIKRCHICKMAKTTQHNTGLYLPLPVPESPWIDVSMDFVLGLPIT 1162

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             RK+D+I+VVVDRFSKMAHFIPC KT DAS +A+L F E+V+LHG+PKTI SDRDVKF S
Sbjct: 1163 QRKNDAIMVVVDRFSKMAHFIPCHKTSDASHIARLYFHEVVRLHGIPKTITSDRDVKFLS 1222

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            +FW+TLW ++GTKL++SS  HPQTDGQTE VNRSLGNLLR  VG+++R WD  L   EFA
Sbjct: 1223 HFWRTLWSKLGTKLQFSSTAHPQTDGQTESVNRSLGNLLRCFVGKSIRSWDEILGQVEFA 1282

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            YN S N+T G SP E+VYG  P  P++L P+      S  A      I  LHK+I   I 
Sbjct: 1283 YNKSRNQTTGRSPFEIVYGQNPTGPLELTPLLSSTAHSLDADTRVKEIQQLHKQIQQHIQ 1342

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
            + N  Y+ +A+  R+   F+ GD V +R+  ERFP     KL  +  GPF +L+RINDNA
Sbjct: 1343 KQNTKYQQQANKSRRGETFKEGDLVWIRLSKERFPNRRYNKLQPKAKGPFRILRRINDNA 1402

Query: 99   YVLNLPEGFGISPIFNIEDL 40
            + + L +   ISP+FNI DL
Sbjct: 1403 FQIELLDNLQISPVFNISDL 1422


>gb|PKU81761.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1268

 Score =  763 bits (1969), Expect = 0.0
 Identities = 353/687 (51%), Positives = 482/687 (70%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            +PF+ KF++VYFDDIL+YS + + H+ HLR V ++L++++LY + KKC FL  ++ FLGF
Sbjct: 577  QPFLSKFVIVYFDDILVYSPDVQSHLQHLRHVFQILKEQKLYCHKKKCQFLDQRIRFLGF 636

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            +VS+ GV  D +K++AI  WP P S  DVR FHGLA+FYRRFI  FSTI A +T+ LK  
Sbjct: 637  IVSAEGVEVDSDKVEAILSWPNPCSFTDVRRFHGLASFYRRFIANFSTIAALLTELLKED 696

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
               W+  A  +F  +K+ M  APVLRLPDFSK+F+V CDAS VG+G VLSQE  PVAYFS
Sbjct: 697  SSHWTAAAQLSFDELKKNMTSAPVLRLPDFSKIFQVDCDASNVGVGAVLSQEGRPVAYFS 756

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKLN+ + RYSTYDKEF+A+++AL HW HYLLP+EFV+F+DH ALK+I SQKKL  RH  
Sbjct: 757  EKLNETRQRYSTYDKEFYAIVRALHHWSHYLLPKEFVLFTDHAALKFIESQKKLKGRHAS 816

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            W EFL  + + L+HK+G  N+ ADA            T + GFE +++ Y +  DF E++
Sbjct: 817  WSEFLAAFQFVLQHKSGTLNQVADALSRRYILLQALHTRLTGFETIRDLYATDTDFKEVW 876

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
             L +    +    F  ++GYLF   ++CIPN SVR  L+ E H GG++GHFG  KT+  +
Sbjct: 877  VLCQDSPHKL---FHRKEGYLFLGTRICIPNCSVRLALVAECHDGGMSGHFGRDKTLTLL 933

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
            + RF+WPS++RDV R V  C  C+ AK    N GLY+PLPVP  PWED+SMDF+LGLP+T
Sbjct: 934  KERFHWPSMQRDVLRYVQSCQVCKRAKTSLTNAGLYSPLPVPVGPWEDVSMDFILGLPRT 993

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             R  DS++V+VDRFSKMAHF+ C+KT DA+ +A L F E+V+LHG+PKTI SDRDVKF S
Sbjct: 994  QRNKDSVMVIVDRFSKMAHFVACNKTMDATHIADLYFKEVVRLHGIPKTITSDRDVKFLS 1053

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            +FW+TLW ++ T+L+YSS  HPQTDGQTE +NRSLGNLLR  +G++++ WDL L   EFA
Sbjct: 1054 HFWRTLWSKLCTRLQYSSTAHPQTDGQTETINRSLGNLLRCFIGKHIKQWDLILAQVEFA 1113

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            +N STN+T G  P E+VYG  P  P+DL+P       S+     +  I  LH+++   I 
Sbjct: 1114 FNRSTNQTTGHIPFEIVYGTNPLTPLDLMPSATLTAVSKEGEQRSKEIKKLHQQVREHIV 1173

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
            + N  Y+ +A+ HRK+ +F++GD V +++R ERFPPG+  KL  +  GPF + KRINDNA
Sbjct: 1174 KQNTKYQKQANKHRKLQQFQVGDKVWIKLRKERFPPGSFGKLKPKADGPFRITKRINDNA 1233

Query: 99   YVLNLPEGFGISPIFNIEDLVAYKGLD 19
            Y ++LP  + +S +FN+ DL  +  ++
Sbjct: 1234 YEIDLPGDYNVSAVFNVADLTPHYDIE 1260


>gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1164

 Score =  759 bits (1959), Expect = 0.0
 Identities = 354/687 (51%), Positives = 483/687 (70%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            +P +   ++VYFDDILIYSK+ + H+ HL+QV ++L++++LY +P+KC FL   + FLGF
Sbjct: 464  QPLLSHCVIVYFDDILIYSKDLQSHMQHLKQVLQILKEQRLYCHPRKCHFLDSWIQFLGF 523

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            ++S+ G+  DPEKI+AI  WP P S  DVR FHGLA+FYRRFI  FSTI AP+T+ LK  
Sbjct: 524  ILSAEGIEVDPEKIRAIVTWPIPCSFTDVRRFHGLASFYRRFIARFSTIAAPLTELLKAS 583

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
             F W++ A  +F  +K++M   PVLRLPDF K+F+V CDAS +GIG VLSQE  P+AYFS
Sbjct: 584  TFCWNQEAQGSFDELKRQMTSTPVLRLPDFDKLFQVECDASNIGIGAVLSQEGKPIAYFS 643

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKLN+ + RYSTYDKEF+A+++ L HW HYLL +EF++F+DH ALK+++S+KKL  RH  
Sbjct: 644  EKLNEVRQRYSTYDKEFYAIVRTLHHWSHYLLCKEFILFTDHAALKFLDSKKKLRGRHAT 703

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            W EFL  + + L+HK+G +N+ ADA              +VGF+ +KE Y + PDF EI+
Sbjct: 704  WAEFLSAFQFVLKHKSGKDNQVADALSRRYALLQTVQAQLVGFDAIKEMYAADPDFGEIW 763

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
               +    +    F L++ +LF    +CIP+ S+R  +I E H GGL+GHFG  KT+   
Sbjct: 764  RKCQQAPYQL---FYLKEDFLFKSLSICIPDCSLRLAVIAECHDGGLSGHFGRDKTLFLT 820

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
              +F+WP++KRDV R +  C  C+ AK    N GLY+PLP+P RPW+D+SMDFV+GLP+T
Sbjct: 821  REKFFWPNIKRDVTRYIRSCQVCRRAKTTLTNAGLYSPLPIPLRPWDDVSMDFVVGLPRT 880

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             R  DSI+VVVDRFSKM+HFI C KT DA+ ++ L F EIV+LHG+P+TIVSDRDVKF S
Sbjct: 881  QRNKDSIMVVVDRFSKMSHFIACHKTLDATHISDLYFKEIVRLHGIPRTIVSDRDVKFLS 940

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            +FW+TLW ++GT+L++SSA HPQTDGQTE VNRSLGNLLR  VG+NL+ WDL LP  EFA
Sbjct: 941  HFWRTLWGKLGTRLQFSSAAHPQTDGQTETVNRSLGNLLRCFVGKNLKQWDLVLPQIEFA 1000

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            +N S N+T G +P E+VYG  P  P+DL+P       S+     +  I  LH+++ +KI 
Sbjct: 1001 FNRSINQTTGHTPFELVYGNNPLTPLDLLPALSVSVYSQDGERRSEEIKKLHQQVRDKIA 1060

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
            Q N  Y+ +A+ HR+   F++GD V +++R ERFPPG   KL  +  GPF  LKRINDNA
Sbjct: 1061 QQNTRYQKQANKHRRSVVFQVGDMVWIKLRKERFPPGPFGKLKPKADGPFRGLKRINDNA 1120

Query: 99   YVLNLPEGFGISPIFNIEDLVAYKGLD 19
            Y + LP  + +S +FN+ DL  +  L+
Sbjct: 1121 YEIELPGDYNVSAVFNVSDLTPHVDLE 1147


>gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1207

 Score =  757 bits (1954), Expect = 0.0
 Identities = 362/691 (52%), Positives = 481/691 (69%)
 Frame = -3

Query: 2079 RPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLGF 1900
            +P + K +VVYFDDILIYS   E H+ HLR V E+LR ++L+ +PKKC +LT+ + FLGF
Sbjct: 517  QPLINKCVVVYFDDILIYSTTLESHLLHLRDVFEILRTQRLFVHPKKCQYLTNSISFLGF 576

Query: 1899 VVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKNG 1720
            ++S+ GV+ADP K++AI +WP PQ+I +VR FHGLA+FYRRFI+ FSTI APIT+ LK  
Sbjct: 577  IISAEGVNADPAKVEAIIQWPIPQTITEVRQFHGLASFYRRFIQNFSTIAAPITELLKGD 636

Query: 1719 EFKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAYFS 1540
             F W+  A   FK +KQ +  APVL LP+F++VFEV CDAS VGIG VLSQ  HP+A+FS
Sbjct: 637  RFVWTAEADNRFKQLKQVISTAPVLALPNFNEVFEVDCDASNVGIGAVLSQRGHPIAFFS 696

Query: 1539 EKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRHGR 1360
            EKLND + +YS YDKEF+AV+QALRHW HYLLP EF++F+DHEAL+++N+Q+KL  RH  
Sbjct: 697  EKLNDVRQKYSVYDKEFYAVVQALRHWEHYLLPHEFILFTDHEALRFLNTQQKLKGRHAA 756

Query: 1359 WVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHEIF 1180
            WVE+L  + + L+HK+G  N+ ADA            T V GFE LKE Y   PDF E++
Sbjct: 757  WVEYLGAFHFVLKHKSGKLNQVADALSRRVILLQTLQTKVTGFEILKELYPQDPDFGELW 816

Query: 1179 SLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIEAV 1000
            S       +  +    Q  +LF+  +LC+P  S R  +I E H   +AGHFG  KT+  V
Sbjct: 817  SKCLETPYKFYHR---QQEHLFYGNRLCVPQGSTRLVIIRECHESSIAGHFGRDKTLALV 873

Query: 999  EHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLPKT 820
            +  F+WPSL RDV R + RC  C +AK + +  GLY PLPVP+ PW D+S+DFVLGLP+T
Sbjct: 874  QEHFFWPSLNRDVDRFIKRCRICVIAKTQSKKLGLYIPLPVPDGPWTDVSLDFVLGLPRT 933

Query: 819  LRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKFTS 640
             R  DSI+VVVDRFSKM+HFI C+KT DAS +A L F EIV+LHG+P+TI SDRDVKF S
Sbjct: 934  QRNKDSIMVVVDRFSKMSHFIACNKTLDASHIADLYFKEIVRLHGIPRTITSDRDVKFLS 993

Query: 639  YFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAEFA 460
            +FW+TLW ++GTKL++SS  HPQTDGQTE VNRSLGNLLR  VG+NL+ WDL LP  EFA
Sbjct: 994  HFWRTLWAKLGTKLQFSSTAHPQTDGQTETVNRSLGNLLRCFVGKNLKSWDLILPQVEFA 1053

Query: 459  YNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNKIN 280
            +N S ++  G SP +V YG  P  P+DLIP  Q  R SE  +  +  + +LH+++   I 
Sbjct: 1054 FNRSVSQATGHSPFQVAYGCVPLSPLDLIPQVQTDRYSEDGAIRSQEVQNLHRKVKELIT 1113

Query: 279  QSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRINDNA 100
            + N   + +A+  R+  +F+ GD V +R+R ERFPPG   KL  +  GPF V++++ DNA
Sbjct: 1114 KHNDKCQKQANRKRRDVKFQEGDRVWIRLRKERFPPGAFGKLKPKADGPFRVVRKLGDNA 1173

Query: 99   YVLNLPEGFGISPIFNIEDLVAYKGLDFNPS 7
            Y + LP  + +S  FN+  LV Y   + +P+
Sbjct: 1174 YQIELPSEYNVSATFNVAYLVPYYEPEVSPT 1204


>gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 839

 Score =  743 bits (1919), Expect = 0.0
 Identities = 362/689 (52%), Positives = 470/689 (68%), Gaps = 2/689 (0%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            LR  +GKF+VVYFDDILIYSK+   H+DHLRQV  VLR   L+AN  KCTF  D VIFLG
Sbjct: 90   LRDCIGKFVVVYFDDILIYSKSLSDHVDHLRQVLLVLRDNHLFANVDKCTFCVDNVIFLG 149

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            FVVS  GV  DPEKIKAI+EWP P ++ +VRSFHGLA+FYRRF+  FST+ +P+ + +K 
Sbjct: 150  FVVSKNGVHVDPEKIKAIQEWPIPTNVSEVRSFHGLASFYRRFVPNFSTLASPLNELVKK 209

Query: 1722 GE-FKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAY 1546
               F+W +    AF+ +K K+ +APVL LPDFSK FE+ CDASG+GIG VL Q  HP+AY
Sbjct: 210  DVVFEWKEKHNLAFQDLKHKLTQAPVLALPDFSKTFELECDASGLGIGAVLLQGGHPIAY 269

Query: 1545 FSEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRH 1366
            FSEKL+ A L Y TYDKE +A+++AL+ W HYL+ +EFVI SDHE+LKY+  Q KLN RH
Sbjct: 270  FSEKLHGAALNYPTYDKELYALVRALQTWEHYLVTKEFVIHSDHESLKYLKGQHKLNKRH 329

Query: 1365 GRWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHE 1186
             +WVE+L+ + Y +++K G  N  ADA            + ++GF+ +KE YE   DF  
Sbjct: 330  AKWVEYLEQFPYVIKYKKGSTNVVADALSRRHVLLNTLGSQILGFDDIKELYEKDLDFAN 389

Query: 1185 IFSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIE 1006
             +SL      +   G+ + +G+LF   KLCIP  S+R+ L+ E H GGL GHFG  KT+ 
Sbjct: 390  FYSLC---IQKPYQGYYISEGFLFKENKLCIPQGSIRKLLVRESHEGGLMGHFGIEKTLS 446

Query: 1005 AVEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLP 826
             +  +F+WP +KRDV R    C  C  AK   +  GLYTPLP+ + PW DISMDF+LGLP
Sbjct: 447  LLREKFFWPHMKRDVQRFCSSCIACLQAKSTTKPHGLYTPLPISSSPWVDISMDFILGLP 506

Query: 825  KTLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKF 646
            +T R  DSI VVVDRFSKMAHFIPC K  DAS +AKL F EIV+LHGLPKTIVSDRDVKF
Sbjct: 507  RTQRGKDSIFVVVDRFSKMAHFIPCHKVDDASNIAKLFFQEIVRLHGLPKTIVSDRDVKF 566

Query: 645  TSYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAE 466
             S+FWKTLW ++GTKL +S+  HPQTDGQTEVVNRSLG +LR ++  N + WD  LP  E
Sbjct: 567  LSHFWKTLWARLGTKLLFSTTCHPQTDGQTEVVNRSLGTMLRAILKGNKKSWDDYLPHVE 626

Query: 465  FAYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVR-ASESASAFASHIHDLHKEISN 289
            FAYN   ++T  MSP E+VYGF P  P+DL+P+        +  ++ A  +  LH+ + +
Sbjct: 627  FAYNRVVHKTTNMSPFEIVYGFNPLTPLDLLPLPDVASFIHKEGTSRAEFVKKLHERVRD 686

Query: 288  KINQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRIN 109
             I      Y+  ++  RK   F+ GD+V + +R +RF      KL  RG GPF++L++IN
Sbjct: 687  HIQSQTEKYQKYSNKGRKEVVFKEGDWVWLHLRKDRFLSKRKSKLSPRGDGPFQILRKIN 746

Query: 108  DNAYVLNLPEGFGISPIFNIEDLVAYKGL 22
            +NAYVL+LP  +G+SP FN+ DL  + GL
Sbjct: 747  NNAYVLDLPSEYGVSPSFNVSDLSLFTGL 775


>ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprotein isoform X1 [Daucus
            carota subsp. sativus]
          Length = 1415

 Score =  760 bits (1962), Expect = 0.0
 Identities = 363/687 (52%), Positives = 484/687 (70%), Gaps = 1/687 (0%)
 Frame = -3

Query: 2082 LRPFMGKFLVVYFDDILIYSKNQEQHIDHLRQVCEVLRKEQLYANPKKCTFLTDKVIFLG 1903
            L+PF+ + +VVYFDDILIYS   E H   L++V E LR+E+LY N KKC F    V+FLG
Sbjct: 731  LKPFLRRCVVVYFDDILIYSPTLEAHKQDLKEVFESLRQEKLYINLKKCNFAVHNVLFLG 790

Query: 1902 FVVSSAGVSADPEKIKAIEEWPEPQSIRDVRSFHGLATFYRRFIKGFSTIMAPITDCLKN 1723
            +++S  GV  D  K++AI +WP P++I +VRSFHGLA+FYRRFI+ FS+++APITDC+K+
Sbjct: 791  YIISDQGVKVDQTKVQAILDWPTPRTIHEVRSFHGLASFYRRFIRNFSSLVAPITDCIKS 850

Query: 1722 GE-FKWSKNATKAFKAIKQKMVEAPVLRLPDFSKVFEVACDASGVGIGGVLSQESHPVAY 1546
             +   W++ A ++F+ IK+K+  APVL LPDF KVFEV CDAS VGIG VLSQE  P+A+
Sbjct: 851  VKTLSWTQEAEESFQLIKRKISAAPVLALPDFDKVFEVDCDASKVGIGAVLSQEGRPIAF 910

Query: 1545 FSEKLNDAKLRYSTYDKEFFAVIQALRHWRHYLLPQEFVIFSDHEALKYINSQKKLNNRH 1366
            +SEKL  ++  YSTYD EF+A+IQAL+HW HYL+ +EF++ SDHEALK+INSQ+ L+ RH
Sbjct: 911  YSEKLTGSRCHYSTYDAEFYAIIQALKHWEHYLVQREFILNSDHEALKFINSQQHLSQRH 970

Query: 1365 GRWVEFLQDYTYTLRHKAGVENKAADAXXXXXXXXXXXXTNVVGFEKLKEEYESCPDFHE 1186
             +WV FLQ +T+T+RHKAG++NK ADA              V GF+  K+ Y     F  
Sbjct: 971  AKWVSFLQRFTFTIRHKAGIQNKVADALSRKASFLTEMRVEVEGFDTFKDLYADDKFFGP 1030

Query: 1185 IFSLLKSGATREINGFLLQDGYLFHFRKLCIPNTSVREYLIWELHAGGLAGHFGNHKTIE 1006
            IF  +  G   E   + LQ+G+LF   +LCIP  S+RE ++ E HA    GHFG  KT+ 
Sbjct: 1031 IFQAILQGEHSE---YQLQEGFLFKGLQLCIPECSLREKIVMEKHA---LGHFGRDKTVA 1084

Query: 1005 AVEHRFYWPSLKRDVARLVGRCHTCQLAKQRKQNTGLYTPLPVPNRPWEDISMDFVLGLP 826
             +E++++WP LKRDV R V RCHTCQ +K    N GLYTPLP+P+ PW D+SMDFV+GLP
Sbjct: 1085 LIENKYFWPKLKRDVTRHVERCHTCQRSKGGSTNAGLYTPLPIPSFPWNDVSMDFVVGLP 1144

Query: 825  KTLRKHDSILVVVDRFSKMAHFIPCSKTFDASRVAKLVFSEIVKLHGLPKTIVSDRDVKF 646
            +T ++ DS++VVVDR+SKMAHF+PC K  DAS VA+L F EI +LHG+P++I SDRD KF
Sbjct: 1145 RTQKRTDSVMVVVDRYSKMAHFVPCRKAMDASHVAELYFKEIFRLHGVPRSITSDRDTKF 1204

Query: 645  TSYFWKTLWHQVGTKLKYSSAFHPQTDGQTEVVNRSLGNLLRTLVGENLRDWDLKLPTAE 466
              +FW+TLW ++GT+L++S+A+HP+TDGQTEVVNRSLGNLLR   G+  + WDL LP AE
Sbjct: 1205 MGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLGNLLRCFAGDKPKQWDLVLPFAE 1264

Query: 465  FAYNNSTNRTIGMSPAEVVYGFKPRQPIDLIPMGQYVRASESASAFASHIHDLHKEISNK 286
            FAYNNS NRT  +SP EVV G  P   +DL P+    +AS  A      I ++H+++ + 
Sbjct: 1265 FAYNNSKNRTTQLSPFEVVGGLSPNTVLDLAPIPNPKKASAKAEEMVERIKEIHEQVRDH 1324

Query: 285  INQSNANYKARADLHRKVNRFEIGDYVMVRIRPERFPPGTVKKLHARGAGPFEVLKRIND 106
            I  SN  YKA AD+HR+   F+ GD V   +  +RF PG   KLH R  GP ++LKR+ND
Sbjct: 1325 IEASNLKYKAAADIHRRKVIFKEGDNVWAVLTKDRFLPGENHKLHDRKVGPCKILKRVND 1384

Query: 105  NAYVLNLPEGFGISPIFNIEDLVAYKG 25
            NAY L LP     S +FN++ L+ YKG
Sbjct: 1385 NAYQLKLPSHIKSSDVFNVKHLLPYKG 1411