BLASTX nr result
ID: Ophiopogon24_contig00005789
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00005789
(1406 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus... 466 e-151
ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein... 464 e-147
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 326 1e-97
ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage fact... 312 1e-92
ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage fact... 306 9e-91
ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage fact... 306 3e-90
ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 305 6e-90
ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage fact... 234 2e-64
ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage fact... 234 2e-64
ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage fact... 215 8e-58
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact... 215 2e-57
ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage fact... 210 3e-56
ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage fact... 210 9e-56
gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus] 198 5e-52
ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage fact... 198 9e-52
ref|XP_020103161.1| polyadenylation and cleavage factor homolog ... 198 1e-51
ref|XP_019054573.1| PREDICTED: polyadenylation and cleavage fact... 189 1e-48
ref|XP_010267732.1| PREDICTED: polyadenylation and cleavage fact... 189 2e-48
ref|XP_010267731.1| PREDICTED: polyadenylation and cleavage fact... 189 2e-48
ref|XP_020674647.1| polyadenylation and cleavage factor homolog ... 188 3e-48
>gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus officinalis]
Length = 1031
Score = 466 bits (1200), Expect = e-151
Identities = 260/474 (54%), Positives = 308/474 (64%), Gaps = 8/474 (1%)
Frame = +2
Query: 8 LRGCGPNSSVQ-YG--DYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVLPLNAN 178
LR G +SS+ YG DYDFN PE+ S H RSKAGS ++AALRTS + +NA
Sbjct: 307 LRAGGNSSSLHSYGRDDYDFNNPEMLSVHLVRSKAGSLKSAALRTSKMYDDH----INAK 362
Query: 179 VTKPLSP-RVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERS 355
V K LSP RV RRSASP ++R RD SPW AERA+QPHSRLGFG G+AV+QNG LE
Sbjct: 363 VPKTLSPSRVMSRRSASPNDDRLSRDGSPWAAAERATQPHSRLGFGPGRAVDQNGRLEGR 422
Query: 356 WPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINK 535
W +V QLE S TYDP+AGY KKHPRELI+AYGN GK TSL+ + K+QR NVNGI++
Sbjct: 423 WLANVGAPQLEASATYDPNAGYIKKHPRELINAYGNPSGKDTSLENISKIQRSNVNGISR 482
Query: 536 EAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHD 715
E TKNWRSFEE+EYVWE+MSPTL D +ILE D
Sbjct: 483 EVATKNWRSFEEDEYVWEDMSPTLLANHRRNNLPQLGPSSGSLNRRIGLSRPDVSILEPD 542
Query: 716 FRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHF 895
FR NNW +QT +PVDDPAI+V+DRI VL SGHGSM M+ D + +NEQF YHS +
Sbjct: 543 FRANNWCDQTTQNPVDDPAIVVNDRIPVLRSGHGSMPMKSSDSREAQNEQFRPYHSSSYV 602
Query: 896 QEPGKFPYNFQHAPGELGSTSRGWRPQMPVP---VAAGNGQKLPSSYDNPTGNGQKLPSS 1066
EPGKFPY+FQHA GEL S SRGW P++P+P +AA NGQKLP YD+P
Sbjct: 603 HEPGKFPYSFQHASGELSSKSRGWEPRIPLPIDRIAADNGQKLPIPYDSP---------- 652
Query: 1067 YGNPPNIVPYQSLLTDQSNTSTVETSMLEKHLELRPFS-XXXXXXXXXVHKSQPLPLLPV 1243
P VP+Q L S++ E SMLEK LELRPFS VHKSQPLPL PV
Sbjct: 653 ---PEVEVPHQKLSNVHSSSLNTEASMLEKRLELRPFSPPTAPVLWPPVHKSQPLPLFPV 709
Query: 1244 PSYQRQFSSPFSLMESNKPFNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
P YQ+QF + SLMES+KP NQG N ++F QFES+DR T S+V +LP Q
Sbjct: 710 PPYQKQFENTSSLMESSKPINQGLNPAIFVP-HQFESSDRRTAEPSRVFTLPHQ 762
>ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109844760 [Asparagus
officinalis]
Length = 1407
Score = 464 bits (1194), Expect = e-147
Identities = 258/470 (54%), Positives = 306/470 (65%), Gaps = 8/470 (1%)
Frame = +2
Query: 20 GPNSSVQ-YG--DYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVLPLNANVTKP 190
G +SS+ YG DYDFN PE+ S H RSKAGS ++AALRTS + +NA V K
Sbjct: 655 GNSSSLHSYGRDDYDFNNPEMLSVHLVRSKAGSLKSAALRTSKMYDDH----INAKVPKT 710
Query: 191 LSP-RVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWPPD 367
LSP RV RRSASP ++R RD SPW AERA+QPHSRLGFG G+AV+QNG LE W +
Sbjct: 711 LSPSRVMSRRSASPNDDRLSRDGSPWAAAERATQPHSRLGFGPGRAVDQNGRLEGRWLAN 770
Query: 368 VDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEAET 547
V QLE S TYDP+AGY KKHPRELI+AYGN GK TSL+ + K+QR NVNGI++E T
Sbjct: 771 VGAPQLEASATYDPNAGYIKKHPRELINAYGNPSGKDTSLENISKIQRSNVNGISREVAT 830
Query: 548 KNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFRGN 727
KNWRSFEE+EYVWE+MSPTL D +ILE DFR N
Sbjct: 831 KNWRSFEEDEYVWEDMSPTLLANHRRNNLPQLGPSSGSLNRRIGLSRPDVSILEPDFRAN 890
Query: 728 NWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHFQEPG 907
NW +QT +PVDDPAI+V+DRI VL SGHGSM M+ D + +NEQF YHS + EPG
Sbjct: 891 NWCDQTTQNPVDDPAIVVNDRIPVLRSGHGSMPMKSSDSREAQNEQFRPYHSSSYVHEPG 950
Query: 908 KFPYNFQHAPGELGSTSRGWRPQMPVP---VAAGNGQKLPSSYDNPTGNGQKLPSSYGNP 1078
KFPY+FQHA GEL S SRGW P++P+P +AA NGQKLP YD+P P
Sbjct: 951 KFPYSFQHASGELSSKSRGWEPRIPLPIDRIAADNGQKLPIPYDSP-------------P 997
Query: 1079 PNIVPYQSLLTDQSNTSTVETSMLEKHLELRPFS-XXXXXXXXXVHKSQPLPLLPVPSYQ 1255
VP+Q L S++ E SMLEK LELRPFS VHKSQPLPL PVP YQ
Sbjct: 998 EVEVPHQKLSNVHSSSLNTEASMLEKRLELRPFSPPTAPVLWPPVHKSQPLPLFPVPPYQ 1057
Query: 1256 RQFSSPFSLMESNKPFNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
+QF + SLMES+KP NQG N ++F QFES+DR T S+V +LP Q
Sbjct: 1058 KQFENTSSLMESSKPINQGLNPAIFVP-HQFESSDRRTAEPSRVFTLPHQ 1106
>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Elaeis guineensis]
Length = 1070
Score = 326 bits (835), Expect = 1e-97
Identities = 200/474 (42%), Positives = 266/474 (56%), Gaps = 6/474 (1%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALR-TSISGVEGPVLPLNAN 178
S L+ G SS+Q +YD + PEV + + GSP TAA R TSI VEGP +
Sbjct: 290 SSLQVYGQKSSLQCNEYDIDHPEVLPSRRGIVRTGSPLTAATRATSIVEVEGPTRHSKSK 349
Query: 179 VTK-PLSPRVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERS 355
++ P + R+S SP +RF R SP RV +R S HS G G QNG ERS
Sbjct: 350 FSRFSPPPIIGPRKSVSPPTDRFSRRTSPRRVLKRTSPSHSEAGRG----TNQNGRFERS 405
Query: 356 WPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINK 535
WP D Q++ S + ++GY+K+H R+LIDAYGN RGK TSL+KLPK+QR++VNGI
Sbjct: 406 WPCDDATEQVKSSMAFSLNSGYAKQHSRDLIDAYGNCRGKSTSLEKLPKVQRLDVNGIAS 465
Query: 536 EAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHD 715
EA T+ W++ EEEEYVWE+MSPTL+D DA++LEHD
Sbjct: 466 EAATRKWKNSEEEEYVWEDMSPTLSDRSRRKSQPPLGPSTGNLSIRGGLTRPDASLLEHD 525
Query: 716 FRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHF 895
F ++W Q + +DDPA V+DRIH G+ HGSM+ + LDG +++ HH
Sbjct: 526 FGRHSWPGQAQLPAIDDPAYTVEDRIHFFGNAHGSMNRKYLDGIVNQHKLLADSQGSHHT 585
Query: 896 QEPGKFPYNF-QHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYG 1072
EP K PY F Q + L RG QMPV A+G + G KLP+ Y
Sbjct: 586 HEPRKLPYMFPQSSQQSLSPRLRGRASQMPV-AASGITPSI----------GNKLPNLYE 634
Query: 1073 NPPNI-VPYQSLLTDQSNTSTVETSMLEKHLELRPFS-XXXXXXXXXVHKSQPLPLLPVP 1246
N P++ V +Q+L + S+ V+TS LE++L RP S VHKSQPLPLLPVP
Sbjct: 635 NTPDMEVAFQTLSSSHSDPFNVDTSTLERYLPQRPHSPPHAPTVWPPVHKSQPLPLLPVP 694
Query: 1247 SYQRQFSSPFSLMESNKP-FNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
Q+Q SPF +E+NKP NQG S + S Q ++ADR+ S+K+L +P Q
Sbjct: 695 PNQKQCKSPFDFLEANKPLLNQGPESSFYFSQHQNDTADRKNLNSNKLLQVPYQ 748
>ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like [Elaeis
guineensis]
Length = 1053
Score = 312 bits (799), Expect = 1e-92
Identities = 184/468 (39%), Positives = 252/468 (53%), Gaps = 6/468 (1%)
Frame = +2
Query: 20 GPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAAL-RTSISGVEGPVLPLNANVTKPLS 196
G SS+Q +Y + PEV P ++ GSPQTAA TS+ VEGP L +++
Sbjct: 275 GQKSSMQCNEYSIDHPEVLPPRPGAARTGSPQTAATCTTSMVEVEGPTRQLKIKISRSSP 334
Query: 197 PRV-RLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWPPDVD 373
P + R S SP +RF RD SP R+ ER S HS +G G+ QNGWLER WP D
Sbjct: 335 PPIIGPRNSISPPIDRFSRDTSPRRMLERVSPSHSGFVYGPGRGTNQNGWLERRWPFDDS 394
Query: 374 LRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEAETKN 553
++++ S ++ + GY+K+ RELIDAYGNY GK SL+KLPK+QR++VN + E +
Sbjct: 395 AQKIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSASLEKLPKVQRVDVNSVASERAARK 454
Query: 554 WRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFRGNNW 733
W++ EEEEYVWE+MSPTL+D DA++L+HD +W
Sbjct: 455 WKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSLPPLSTRAGLTRPDASLLDHDSGRRSW 514
Query: 734 HEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHFQEPGKF 913
Q + V D A ++DRI V GS HGSM+ + LD +N+ HY H +P K
Sbjct: 515 PGQAQLPAVGDSAFTIEDRIPVFGSAHGSMNRKYLDSTVSQNDWLPHYQGSQHMHQPRKL 574
Query: 914 PYNF-QHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGNPPNI- 1087
P+ F + A L SRG QMPV + + KLPS Y + ++
Sbjct: 575 PFMFPKSAQHSLSPQSRGRAHQMPVAASGITPLVI-----------NKLPSPYEHTTDLE 623
Query: 1088 VPYQSLLTDQSNTSTVETSMLEKHLELRPFS-XXXXXXXXXVHKSQPLPLLPVPSYQRQF 1264
VP+Q L + S+ V+TS LE+HL RP S VH +Q LPLLP+P Q+QF
Sbjct: 624 VPFQRLSSSHSDPFDVDTSTLERHLTQRPHSPPPAPIIWPPVHNTQQLPLLPIPPNQKQF 683
Query: 1265 SSPFSLMESNKPFNQGHNQSLFP-SLQQFESADRETKMSSKVLSLPQQ 1405
S F +E+NKP +S F S Q ++ADR+ S+K+L LP Q
Sbjct: 684 KSSFDHVEANKPILNQRPESFFNLSQYQNDTADRKISNSNKLLQLPYQ 731
>ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Phoenix dactylifera]
Length = 977
Score = 306 bits (783), Expect = 9e-91
Identities = 186/473 (39%), Positives = 259/473 (54%), Gaps = 5/473 (1%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRT-SISGVEGPVLPLNAN 178
S L+ G SS+Q +Y+ + PEV ++ GSPQTAA T S+ VEGP L
Sbjct: 207 SSLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEGPTRQLKIK 266
Query: 179 VTKPLSPRV-RLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERS 355
+++P P + R+S SP +RF RD SP R+ ERAS HS +G G+ QNGWLER
Sbjct: 267 ISRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNGWLERR 326
Query: 356 WPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINK 535
P D +Q++ S ++ + GY+K+ RELIDAYGNY GK SL+KLPK+ R++VN +
Sbjct: 327 RPFDDGAQQIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPRLDVNSVAS 386
Query: 536 EAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHD 715
E ++ W++ EEEEYVWE+MSPTL+D DA++L+HD
Sbjct: 387 ERASRKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRPDASLLDHD 446
Query: 716 FRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHF 895
+W Q + V DPA ++DRI V G HGSM+ + LD +N+ Y HH
Sbjct: 447 SGRRSWPGQAQLPAVGDPANTIEDRIPVFGPAHGSMNRKYLDSTVSQNDWLPPYQGSHHT 506
Query: 896 QEPGKFPYNFQHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGN 1075
EP K PY F + + + R R +PVAA L S+ KLPS Y +
Sbjct: 507 HEPRKLPYMFPKS-SQHNLSPRSRRRAHQMPVAASGITSLVSN---------KLPSPYEH 556
Query: 1076 PPNI-VPYQSLLTDQSNTSTVETSMLEKHLELRPFS-XXXXXXXXXVHKSQPLPLLPVPS 1249
++ VP+ L + S+ V+TS LE+HL RP S VH +Q LPLLP+P
Sbjct: 557 TTDMEVPFSRLSSSHSDPFDVDTSTLERHLAQRPHSPPPPPIVRPSVHNNQQLPLLPIPP 616
Query: 1250 YQRQFSSPFSLMESNKPF-NQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
Q+Q SPF +E++KP NQ L+ S Q ++ADR+T S+K+L +P Q
Sbjct: 617 NQKQLKSPFDDVEAHKPIPNQRPESFLYLSQYQNDTADRKTLNSNKLLQVPYQ 669
>ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
ref|XP_008808981.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
ref|XP_008808982.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
ref|XP_008808983.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
Length = 1065
Score = 306 bits (783), Expect = 3e-90
Identities = 186/473 (39%), Positives = 259/473 (54%), Gaps = 5/473 (1%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRT-SISGVEGPVLPLNAN 178
S L+ G SS+Q +Y+ + PEV ++ GSPQTAA T S+ VEGP L
Sbjct: 295 SSLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEGPTRQLKIK 354
Query: 179 VTKPLSPRV-RLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERS 355
+++P P + R+S SP +RF RD SP R+ ERAS HS +G G+ QNGWLER
Sbjct: 355 ISRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNGWLERR 414
Query: 356 WPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINK 535
P D +Q++ S ++ + GY+K+ RELIDAYGNY GK SL+KLPK+ R++VN +
Sbjct: 415 RPFDDGAQQIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPRLDVNSVAS 474
Query: 536 EAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHD 715
E ++ W++ EEEEYVWE+MSPTL+D DA++L+HD
Sbjct: 475 ERASRKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRPDASLLDHD 534
Query: 716 FRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHF 895
+W Q + V DPA ++DRI V G HGSM+ + LD +N+ Y HH
Sbjct: 535 SGRRSWPGQAQLPAVGDPANTIEDRIPVFGPAHGSMNRKYLDSTVSQNDWLPPYQGSHHT 594
Query: 896 QEPGKFPYNFQHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGN 1075
EP K PY F + + + R R +PVAA L S+ KLPS Y +
Sbjct: 595 HEPRKLPYMFPKS-SQHNLSPRSRRRAHQMPVAASGITSLVSN---------KLPSPYEH 644
Query: 1076 PPNI-VPYQSLLTDQSNTSTVETSMLEKHLELRPFS-XXXXXXXXXVHKSQPLPLLPVPS 1249
++ VP+ L + S+ V+TS LE+HL RP S VH +Q LPLLP+P
Sbjct: 645 TTDMEVPFSRLSSSHSDPFDVDTSTLERHLAQRPHSPPPPPIVRPSVHNNQQLPLLPIPP 704
Query: 1250 YQRQFSSPFSLMESNKPF-NQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
Q+Q SPF +E++KP NQ L+ S Q ++ADR+T S+K+L +P Q
Sbjct: 705 NQKQLKSPFDDVEAHKPIPNQRPESFLYLSQYQNDTADRKTLNSNKLLQVPYQ 757
>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4-like [Phoenix dactylifera]
Length = 1063
Score = 305 bits (781), Expect = 6e-90
Identities = 192/474 (40%), Positives = 260/474 (54%), Gaps = 6/474 (1%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALR-TSISGVEGPVLPLNAN 178
S L+ G SS+Q YD + PEV + +AGSP TAA + +S+ VEGP +
Sbjct: 290 SSLQVYGRKSSMQCNKYDIDNPEVRPSRRGILRAGSPHTAATQASSMVEVEGPTHHSKSK 349
Query: 179 VTK-PLSPRVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERS 355
++ P + R+S P+ +RF R+ SP RV ERAS HS G G+ QN W ER
Sbjct: 350 FSRFSPPPIIGPRKSILPLTDRFSRNTSPRRVLERASPSHS----GAGRGTNQNSWFERI 405
Query: 356 WPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINK 535
WP D +Q++ S ++ + GY++KH RELIDAYGN G TSL+KLPK+QR++VNG+
Sbjct: 406 WPFDDVTQQVKSSMAFNLNNGYAEKHSRELIDAYGNCSGTSTSLEKLPKVQRLDVNGLAS 465
Query: 536 EAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHD 715
EA W++ EEEEYVWE+MSPTL+D DA++LEHD
Sbjct: 466 EAANIKWKNSEEEEYVWEDMSPTLSDRSRRNSQPPLGRSTGSLSIRGGLTRPDASLLEHD 525
Query: 716 FRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHF 895
F ++W Q + VDDPA V+DRI + GS HGS + + LD +N+ H HH
Sbjct: 526 FGRHSWPGQAQ--AVDDPAYTVEDRIPLFGSAHGSRNRKNLDSIVNQNKLLLHSQGSHHT 583
Query: 896 QEPGKFPYNF-QHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYG 1072
+EP K PY Q + L +RG PQMPV S P GN KLP+ Y
Sbjct: 584 REPRKLPYVLPQSSQQSLSPQARGRAPQMPVAA---------SGITPPIGN--KLPNLYE 632
Query: 1073 NPPNI-VPYQSLLTDQSNTSTVETSMLEKHLELRPFS-XXXXXXXXXVHKSQPLPLLPVP 1246
N P++ V +Q L + SN V+TS LE +L P S VHKS+ LPLLP+
Sbjct: 633 NTPDMEVAFQELSSSHSNPFNVDTSTLEIYLPQIPHSPPPAPIIWPPVHKSEALPLLPIL 692
Query: 1247 SYQRQFSSPFSLMESNKP-FNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
Q+QF SPF +E++KP NQG S + S Q ++AD + S+K+L +P Q
Sbjct: 693 PNQKQFKSPFDFLEASKPLLNQGLESSFYFSQHQDDTADTKNSNSNKLLQVPYQ 746
>ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 1000
Score = 234 bits (598), Expect = 2e-64
Identities = 161/469 (34%), Positives = 231/469 (49%), Gaps = 5/469 (1%)
Frame = +2
Query: 8 LRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALR-TSISGVEGPVLPLNANVT 184
L+ G S QY +YD ++PE+ ++ GSPQTA LR +S+ G V L ++
Sbjct: 242 LQAYGQKPSAQYSEYDLDQPELLPQRLAVAREGSPQTAMLRPSSMIDARGSVPYLKNKIS 301
Query: 185 KPLSPR-VRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWP 361
PLSPR + L+R SP R SP ++ RAS H GF G+ + NGWL RSWP
Sbjct: 302 VPLSPRRIGLKRPVSPPIVRSHNGTSPRKIGGRASTSHFGSGFEPGRLSDPNGWLGRSWP 361
Query: 362 PDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEA 541
+ D + +E ST Y + G K+HPR+LIDAYGN RG+ +S +K K+QR++VNGI EA
Sbjct: 362 SNEDPQHVEASTLYKLNNGSGKQHPRDLIDAYGNPRGRVSSYEKFSKVQRLDVNGIASEA 421
Query: 542 ETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFR 721
+ W++ +EEEY WE+MSPTL+D D +LE DF
Sbjct: 422 AARKWKNSDEEEYDWEDMSPTLSDRSRRNSLPRVGPSAGSLGIRTGFSRPDPAVLESDFG 481
Query: 722 GNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHFQE 901
+W Q + H D+P+ +V+DRI GS SM M+ LDG ++ +
Sbjct: 482 RRSWPGQAQLHAADNPSFMVEDRIAARGSRSASM-MKYLDGTTSQS-------------D 527
Query: 902 PGKFPYNF-QHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGNP 1078
GK Y F Q L SR QMPV ++ + + Q+LP +
Sbjct: 528 IGKLSYLFPQPTHKSLSPRSRSRVTQMPV-----------AAKEMTSAAVQRLPIPHDYS 576
Query: 1079 PNI-VPYQSLLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHKSQPLPLLPVPSYQ 1255
P+I +P+ L ++ ++ S H +HKSQP PLL +P Q
Sbjct: 577 PDIDLPHHRLSNAHADPLKMDMSTQRPH-------SSAPVILPSIHKSQPRPLLSIPQTQ 629
Query: 1256 RQFSSPFSLMESNKPFN-QGHNQSLFPSLQQFESADRETKMSSKVLSLP 1399
+ SS + + K QG + + F QQ++ ADR+ K S K+L LP
Sbjct: 630 KPISSSPDVSLATKSIAIQGSHPTRFVPEQQYDIADRKNKDSVKLLHLP 678
>ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_009399216.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 1039
Score = 234 bits (598), Expect = 2e-64
Identities = 161/469 (34%), Positives = 231/469 (49%), Gaps = 5/469 (1%)
Frame = +2
Query: 8 LRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALR-TSISGVEGPVLPLNANVT 184
L+ G S QY +YD ++PE+ ++ GSPQTA LR +S+ G V L ++
Sbjct: 281 LQAYGQKPSAQYSEYDLDQPELLPQRLAVAREGSPQTAMLRPSSMIDARGSVPYLKNKIS 340
Query: 185 KPLSPR-VRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWP 361
PLSPR + L+R SP R SP ++ RAS H GF G+ + NGWL RSWP
Sbjct: 341 VPLSPRRIGLKRPVSPPIVRSHNGTSPRKIGGRASTSHFGSGFEPGRLSDPNGWLGRSWP 400
Query: 362 PDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEA 541
+ D + +E ST Y + G K+HPR+LIDAYGN RG+ +S +K K+QR++VNGI EA
Sbjct: 401 SNEDPQHVEASTLYKLNNGSGKQHPRDLIDAYGNPRGRVSSYEKFSKVQRLDVNGIASEA 460
Query: 542 ETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFR 721
+ W++ +EEEY WE+MSPTL+D D +LE DF
Sbjct: 461 AARKWKNSDEEEYDWEDMSPTLSDRSRRNSLPRVGPSAGSLGIRTGFSRPDPAVLESDFG 520
Query: 722 GNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHFQE 901
+W Q + H D+P+ +V+DRI GS SM M+ LDG ++ +
Sbjct: 521 RRSWPGQAQLHAADNPSFMVEDRIAARGSRSASM-MKYLDGTTSQS-------------D 566
Query: 902 PGKFPYNF-QHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGNP 1078
GK Y F Q L SR QMPV ++ + + Q+LP +
Sbjct: 567 IGKLSYLFPQPTHKSLSPRSRSRVTQMPV-----------AAKEMTSAAVQRLPIPHDYS 615
Query: 1079 PNI-VPYQSLLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHKSQPLPLLPVPSYQ 1255
P+I +P+ L ++ ++ S H +HKSQP PLL +P Q
Sbjct: 616 PDIDLPHHRLSNAHADPLKMDMSTQRPH-------SSAPVILPSIHKSQPRPLLSIPQTQ 668
Query: 1256 RQFSSPFSLMESNKPFN-QGHNQSLFPSLQQFESADRETKMSSKVLSLP 1399
+ SS + + K QG + + F QQ++ ADR+ K S K+L LP
Sbjct: 669 KPISSSPDVSLATKSIAIQGSHPTRFVPEQQYDIADRKNKDSVKLLHLP 717
>ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Nelumbo nucifera]
Length = 895
Score = 215 bits (547), Expect = 8e-58
Identities = 164/483 (33%), Positives = 219/483 (45%), Gaps = 18/483 (3%)
Frame = +2
Query: 11 RGCGPNSSVQ---------YGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVL 163
+G G +SS+Q Y ++D + E SPH S Q AA+R S G +L
Sbjct: 78 QGRGSSSSLQIYGRKPASGYVEFDLDHDEGISPHFGVQGLDS-QGAAIRASSVGAAERLL 136
Query: 164 PLNANVTKPLSPRVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGW 343
P A + + SP RS P + F ++SP RV E AS HS +G GKA + +G
Sbjct: 137 PTKARLARSSSPARIGARSLPPTNDGFAINNSPRRVVEGASPSHSGSEYGPGKATDGDGE 196
Query: 344 LERSWPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVN 523
W +Q+E S TY+P G ++ PR LIDAYGNYRGK T K K++R+++N
Sbjct: 197 KSEWW---FKCQQMETSGTYNPSNGCDQQRPRALIDAYGNYRGKNTLNGKPLKVERLDIN 253
Query: 524 GINKEAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANI 703
GIN + +K W++ EEEEYVWE+MSPTL D I
Sbjct: 254 GINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRGNDLMPFNPPLGSLSRRTGLERPSTAI 313
Query: 704 LEHDFRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHS 883
LE DFR NW Q + +DD A I D + +LGSGH +M L +NE H S
Sbjct: 314 LESDFRRGNWPNQVQLSTMDDAAFISGDGVSILGSGHVTMGNNSLRCPQTQNES-SHVQS 372
Query: 884 PHHFQEPGKFPYNF-QHAPGELGSTSRGWRPQMPVPVAA---GNGQKLPSSYDNPTGNGQ 1051
HH QEP FP+ F Q + L +RG QM P A +K+PS DN
Sbjct: 373 SHHSQEPQNFPHQFPQSSQEHLDLKARGRAVQMSFPAAGVVPSAIKKMPSQVDNFLDTDA 432
Query: 1052 KLPSSYGNPPNIVPYQSLLTDQSNTSTVETSM-----LEKHLELRPFSXXXXXXXXXVHK 1216
+ G + S D N + T M L+KH RP V K
Sbjct: 433 QFQRFSG---VVSRMGSSNRDTMNVEALSTMMPPASALQKHRGQRPSLAPLVWPPVNVPK 489
Query: 1217 SQPLPLLPVPSYQRQFSSPFSLMESNKPFNQGHNQSLFPSLQQFESADRETKMSSKVLSL 1396
S P P L V Q Q S ++M+ ++ N+SL Q +R T +K+L
Sbjct: 490 SHPPPPLSVLPQQNQIKSQSNIMD----ISRIPNKSLTLPGQHLGVIERNTLTPTKLLQF 545
Query: 1397 PQQ 1405
P Q
Sbjct: 546 PNQ 548
>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nelumbo nucifera]
Length = 1071
Score = 215 bits (547), Expect = 2e-57
Identities = 164/483 (33%), Positives = 219/483 (45%), Gaps = 18/483 (3%)
Frame = +2
Query: 11 RGCGPNSSVQ---------YGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVL 163
+G G +SS+Q Y ++D + E SPH S Q AA+R S G +L
Sbjct: 254 QGRGSSSSLQIYGRKPASGYVEFDLDHDEGISPHFGVQGLDS-QGAAIRASSVGAAERLL 312
Query: 164 PLNANVTKPLSPRVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGW 343
P A + + SP RS P + F ++SP RV E AS HS +G GKA + +G
Sbjct: 313 PTKARLARSSSPARIGARSLPPTNDGFAINNSPRRVVEGASPSHSGSEYGPGKATDGDGE 372
Query: 344 LERSWPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVN 523
W +Q+E S TY+P G ++ PR LIDAYGNYRGK T K K++R+++N
Sbjct: 373 KSEWW---FKCQQMETSGTYNPSNGCDQQRPRALIDAYGNYRGKNTLNGKPLKVERLDIN 429
Query: 524 GINKEAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANI 703
GIN + +K W++ EEEEYVWE+MSPTL D I
Sbjct: 430 GINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRGNDLMPFNPPLGSLSRRTGLERPSTAI 489
Query: 704 LEHDFRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHS 883
LE DFR NW Q + +DD A I D + +LGSGH +M L +NE H S
Sbjct: 490 LESDFRRGNWPNQVQLSTMDDAAFISGDGVSILGSGHVTMGNNSLRCPQTQNES-SHVQS 548
Query: 884 PHHFQEPGKFPYNF-QHAPGELGSTSRGWRPQMPVPVAA---GNGQKLPSSYDNPTGNGQ 1051
HH QEP FP+ F Q + L +RG QM P A +K+PS DN
Sbjct: 549 SHHSQEPQNFPHQFPQSSQEHLDLKARGRAVQMSFPAAGVVPSAIKKMPSQVDNFLDTDA 608
Query: 1052 KLPSSYGNPPNIVPYQSLLTDQSNTSTVETSM-----LEKHLELRPFSXXXXXXXXXVHK 1216
+ G + S D N + T M L+KH RP V K
Sbjct: 609 QFQRFSG---VVSRMGSSNRDTMNVEALSTMMPPASALQKHRGQRPSLAPLVWPPVNVPK 665
Query: 1217 SQPLPLLPVPSYQRQFSSPFSLMESNKPFNQGHNQSLFPSLQQFESADRETKMSSKVLSL 1396
S P P L V Q Q S ++M+ ++ N+SL Q +R T +K+L
Sbjct: 666 SHPPPPLSVLPQQNQIKSQSNIMD----ISRIPNKSLTLPGQHLGVIERNTLTPTKLLQF 721
Query: 1397 PQQ 1405
P Q
Sbjct: 722 PNQ 724
>ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X4 [Musa acuminata subsp. malaccensis]
Length = 838
Score = 210 bits (534), Expect = 3e-56
Identities = 150/462 (32%), Positives = 223/462 (48%), Gaps = 4/462 (0%)
Frame = +2
Query: 32 SVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSIS-GVEGPVLPLNANVTKPLSP-RV 205
S QY + DF+ PE+ S AG PQTA + S + G G + L ++ SP R+
Sbjct: 91 SKQYSESDFDLPELLPQDLGTSGAGPPQTAMVHVSSAIGAGGSMPHLKNKISLSSSPPRI 150
Query: 206 RLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWPPDVDLRQL 385
+RR SP RF S ++ AS HS +G G+ + N +RS P + D +
Sbjct: 151 GVRRHVSPPNMRFYNGISARKIGGMASPSHSGFVYGPGRVSDPNSRADRSRPSNEDPYHV 210
Query: 386 EVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEAETKNWRSF 565
EVS ++ GY K+HPR+LIDAYGN RG+ +S +K PK+QR++VNGI EA T+ W++
Sbjct: 211 EVSMQHNHKYGYGKQHPRDLIDAYGNPRGRVSSYEKFPKVQRLDVNGIASEAATRKWKNS 270
Query: 566 EEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFRGNNWHEQT 745
+EEEYVWE+MSPTLAD + +LE DF+ ++W QT
Sbjct: 271 DEEEYVWESMSPTLADQSRRNSLPPFGPSSGSISNRTGISISNPAMLETDFQRHSWPVQT 330
Query: 746 KHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHFQEPGKFPYNF 925
+ HP GSM M+ LDG + H+ + ++ GKF F
Sbjct: 331 QSHP-------------------GSM-MKYLDGTTSQTGSPPHHQKLNRTRDSGKFSCLF 370
Query: 926 QHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGNPPNI-VPYQS 1102
ST + P+ A G PS GQKLP ++ + P+I +P +S
Sbjct: 371 PQ------STRQSLSPRSR-STALALGGVAPSI-------GQKLPVAHDSLPDIELPLRS 416
Query: 1103 LLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHKSQPLPLLPVPSYQRQFSSPFSL 1282
L + + T+++++ LRP+S HKSQ LP L +P Q+ + +
Sbjct: 417 LSNAHDDPLKINTAVIDRQSTLRPYS-PPQDMLPSAHKSQSLPCLSIPPNQKLVNGQLDI 475
Query: 1283 MESNK-PFNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
E NK NQG + +F +Q++ D+ + S K + P Q
Sbjct: 476 SEPNKLLMNQGADPRIFVPEKQYDIVDKYSSESVKFIHFPYQ 517
>ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 991
Score = 210 bits (534), Expect = 9e-56
Identities = 150/462 (32%), Positives = 223/462 (48%), Gaps = 4/462 (0%)
Frame = +2
Query: 32 SVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSIS-GVEGPVLPLNANVTKPLSP-RV 205
S QY + DF+ PE+ S AG PQTA + S + G G + L ++ SP R+
Sbjct: 244 SKQYSESDFDLPELLPQDLGTSGAGPPQTAMVHVSSAIGAGGSMPHLKNKISLSSSPPRI 303
Query: 206 RLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWPPDVDLRQL 385
+RR SP RF S ++ AS HS +G G+ + N +RS P + D +
Sbjct: 304 GVRRHVSPPNMRFYNGISARKIGGMASPSHSGFVYGPGRVSDPNSRADRSRPSNEDPYHV 363
Query: 386 EVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEAETKNWRSF 565
EVS ++ GY K+HPR+LIDAYGN RG+ +S +K PK+QR++VNGI EA T+ W++
Sbjct: 364 EVSMQHNHKYGYGKQHPRDLIDAYGNPRGRVSSYEKFPKVQRLDVNGIASEAATRKWKNS 423
Query: 566 EEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFRGNNWHEQT 745
+EEEYVWE+MSPTLAD + +LE DF+ ++W QT
Sbjct: 424 DEEEYVWESMSPTLADQSRRNSLPPFGPSSGSISNRTGISISNPAMLETDFQRHSWPVQT 483
Query: 746 KHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSPHHFQEPGKFPYNF 925
+ HP GSM M+ LDG + H+ + ++ GKF F
Sbjct: 484 QSHP-------------------GSM-MKYLDGTTSQTGSPPHHQKLNRTRDSGKFSCLF 523
Query: 926 QHAPGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGNPPNI-VPYQS 1102
ST + P+ A G PS GQKLP ++ + P+I +P +S
Sbjct: 524 PQ------STRQSLSPRSR-STALALGGVAPSI-------GQKLPVAHDSLPDIELPLRS 569
Query: 1103 LLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHKSQPLPLLPVPSYQRQFSSPFSL 1282
L + + T+++++ LRP+S HKSQ LP L +P Q+ + +
Sbjct: 570 LSNAHDDPLKINTAVIDRQSTLRPYS-PPQDMLPSAHKSQSLPCLSIPPNQKLVNGQLDI 628
Query: 1283 MESNK-PFNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
E NK NQG + +F +Q++ D+ + S K + P Q
Sbjct: 629 SEPNKLLMNQGADPRIFVPEKQYDIVDKYSSESVKFIHFPYQ 670
>gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus]
Length = 860
Score = 198 bits (504), Expect = 5e-52
Identities = 157/464 (33%), Positives = 215/464 (46%), Gaps = 6/464 (1%)
Frame = +2
Query: 32 SVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVLPLNANVTKPLSP-RVR 208
S + GD +++ P + GSP A T++ EG +L +N+ K LSP R+
Sbjct: 254 SSKSGDLEYDHSGSLPPRVPMAGVGSPGYTATHTNL---EGSLLHSRSNIPKVLSPSRIG 310
Query: 209 LRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWPPDVDLRQLE 388
+RRS SP + +P P RV ER S + G+G G+ +QNG E E
Sbjct: 311 MRRSRSPPGDLYPPVSPPRRVIERPSPSRTGFGYGRGRVADQNGIFEMP---------SE 361
Query: 389 VSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEAETKNWRSFE 568
S Y + G+ K++ RELIDAYGNYRGK +KLPKLQR++ NG EA W++ +
Sbjct: 362 ASKAYKLNNGFGKQNARELIDAYGNYRGKD---EKLPKLQRLDTNGNVGEATAIKWKTSD 418
Query: 569 EEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFRGNNWHEQTK 748
EEEYVWE+MSPTLAD +A I+ DF ++W Q +
Sbjct: 419 EEEYVWEDMSPTLADRSRRNSLPPIGPSSGMLSSGPGFSRPNAGIMNTDFVRHSWPGQGQ 478
Query: 749 HHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYH-SPHHFQEPGKFPYNF 925
+DDP + V+DR+ V GSGH P + NE F +Y S +H QEP K P+
Sbjct: 479 LAAIDDPVLNVEDRLPVAGSGHEVNKKYPQSAR-HHNESFSYYQSSSYHSQEPSKLPHML 537
Query: 926 QHAPGE-LGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGNP-PNIVPYQ 1099
+ + L SR PQM A+G + PS QKL Y P N VP+Q
Sbjct: 538 RPTSQQSLDPLSRVPAPQM----ASGLSRVAPSI-------TQKLTIPYDTPLDNEVPFQ 586
Query: 1100 SLLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHKSQPLPLLP-VPSYQRQFSSPF 1276
T S+ EK L R S + + LLP +P F S
Sbjct: 587 RSSTAYSDQPN------EKQLAQRAHSPIPGPLEWPPVRKSEMQLLPSIPPNLNHFKSAA 640
Query: 1277 SLMESNK-PFNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
+E+N+ NQG N SL QQ+ +SK++ LP Q
Sbjct: 641 DFLETNRTSVNQGPNPSLILPQQQYN--------TSKLVQLPYQ 676
>ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 956
Score = 198 bits (504), Expect = 9e-52
Identities = 143/441 (32%), Positives = 213/441 (48%), Gaps = 4/441 (0%)
Frame = +2
Query: 95 SKAGSPQTAALRTSIS-GVEGPVLPLNANVTKPLSP-RVRLRRSASPIENRFPRDDSPWR 268
S AG PQTA + S + G G + L ++ SP R+ +RR SP RF S +
Sbjct: 230 SGAGPPQTAMVHVSSAIGAGGSMPHLKNKISLSSSPPRIGVRRHVSPPNMRFYNGISARK 289
Query: 269 VAERASQPHSRLGFGLGKAVEQNGWLERSWPPDVDLRQLEVSTTYDPDAGYSKKHPRELI 448
+ AS HS +G G+ + N +RS P + D +EVS ++ GY K+HPR+LI
Sbjct: 290 IGGMASPSHSGFVYGPGRVSDPNSRADRSRPSNEDPYHVEVSMQHNHKYGYGKQHPRDLI 349
Query: 449 DAYGNYRGKGTSLDKLPKLQRINVNGINKEAETKNWRSFEEEEYVWENMSPTLADXXXXX 628
DAYGN RG+ +S +K PK+QR++VNGI EA T+ W++ +EEEYVWE+MSPTLAD
Sbjct: 350 DAYGNPRGRVSSYEKFPKVQRLDVNGIASEAATRKWKNSDEEEYVWESMSPTLADQSRRN 409
Query: 629 XXXXXXXXXXXXXXXXXXXXXDANILEHDFRGNNWHEQTKHHPVDDPAIIVDDRIHVLGS 808
+ +LE DF+ ++W QT+ HP
Sbjct: 410 SLPPFGPSSGSISNRTGISISNPAMLETDFQRHSWPVQTQSHP----------------- 452
Query: 809 GHGSMHMRPLDGKGGRNEQFHHYHSPHHFQEPGKFPYNFQHAPGELGSTSRGWRPQMPVP 988
GSM M+ LDG + H+ + ++ GKF F ST + P+
Sbjct: 453 --GSM-MKYLDGTTSQTGSPPHHQKLNRTRDSGKFSCLFPQ------STRQSLSPRSR-S 502
Query: 989 VAAGNGQKLPSSYDNPTGNGQKLPSSYGNPPNI-VPYQSLLTDQSNTSTVETSMLEKHLE 1165
A G PS GQKLP ++ + P+I +P +SL + + T+++++
Sbjct: 503 TALALGGVAPSI-------GQKLPVAHDSLPDIELPLRSLSNAHDDPLKINTAVIDRQST 555
Query: 1166 LRPFSXXXXXXXXXVHKSQPLPLLPVPSYQRQFSSPFSLMESNK-PFNQGHNQSLFPSLQ 1342
LRP+S HKSQ LP L +P Q+ + + E NK NQG + +F +
Sbjct: 556 LRPYS-PPQDMLPSAHKSQSLPCLSIPPNQKLVNGQLDISEPNKLLMNQGADPRIFVPEK 614
Query: 1343 QFESADRETKMSSKVLSLPQQ 1405
Q++ D+ + S K + P Q
Sbjct: 615 QYDIVDKYSSESVKFIHFPYQ 635
>ref|XP_020103161.1| polyadenylation and cleavage factor homolog 4-like [Ananas comosus]
Length = 999
Score = 198 bits (504), Expect = 1e-51
Identities = 157/464 (33%), Positives = 215/464 (46%), Gaps = 6/464 (1%)
Frame = +2
Query: 32 SVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVLPLNANVTKPLSP-RVR 208
S + GD +++ P + GSP A T++ EG +L +N+ K LSP R+
Sbjct: 254 SSKSGDLEYDHSGSLPPRVPMAGVGSPGYTATHTNL---EGSLLHSRSNIPKVLSPSRIG 310
Query: 209 LRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLERSWPPDVDLRQLE 388
+RRS SP + +P P RV ER S + G+G G+ +QNG E E
Sbjct: 311 MRRSRSPPGDLYPPVSPPRRVIERPSPSRTGFGYGRGRVADQNGIFEMP---------SE 361
Query: 389 VSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGINKEAETKNWRSFE 568
S Y + G+ K++ RELIDAYGNYRGK +KLPKLQR++ NG EA W++ +
Sbjct: 362 ASKAYKLNNGFGKQNARELIDAYGNYRGKD---EKLPKLQRLDTNGNVGEATAIKWKTSD 418
Query: 569 EEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANILEHDFRGNNWHEQTK 748
EEEYVWE+MSPTLAD +A I+ DF ++W Q +
Sbjct: 419 EEEYVWEDMSPTLADRSRRNSLPPIGPSSGMLSSGPGFSRPNAGIMNTDFVRHSWPGQGQ 478
Query: 749 HHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYH-SPHHFQEPGKFPYNF 925
+DDP + V+DR+ V GSGH P + NE F +Y S +H QEP K P+
Sbjct: 479 LAAIDDPVLNVEDRLPVAGSGHEVNKKYPQSAR-HHNESFSYYQSSSYHSQEPSKLPHML 537
Query: 926 QHAPGE-LGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPSSYGNP-PNIVPYQ 1099
+ + L SR PQM A+G + PS QKL Y P N VP+Q
Sbjct: 538 RPTSQQSLDPLSRVPAPQM----ASGLSRVAPSI-------TQKLTIPYDTPLDNEVPFQ 586
Query: 1100 SLLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHKSQPLPLLP-VPSYQRQFSSPF 1276
T S+ EK L R S + + LLP +P F S
Sbjct: 587 RSSTAYSDQPN------EKQLAQRAHSPIPGPLEWPPVRKSEMQLLPSIPPNLNHFKSAA 640
Query: 1277 SLMESNK-PFNQGHNQSLFPSLQQFESADRETKMSSKVLSLPQQ 1405
+E+N+ NQG N SL QQ+ +SK++ LP Q
Sbjct: 641 DFLETNRTSVNQGPNPSLILPQQQYN--------TSKLVQLPYQ 676
>ref|XP_019054573.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Nelumbo nucifera]
Length = 906
Score = 189 bits (480), Expect = 1e-48
Identities = 153/488 (31%), Positives = 219/488 (44%), Gaps = 20/488 (4%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVLPLNANV 181
S L+ G +++YG++D + EV SP + S Q A+ +S+ E +LP +
Sbjct: 98 SSLQIYGQKPTIEYGEHDSDHGEVISPRVVVQRLDS-QGASTHSSVGSAER-LLPTKIRL 155
Query: 182 TKPLSPRVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNG-----WL 346
T+P SP + RS SP + F D+SP +V +R S HS +G + + +G WL
Sbjct: 156 TRPSSPTIGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSGSIYGPRRMTDNDGERSYQWL 215
Query: 347 ERSWPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNG 526
+ WP D +++E S+ Y+ + IDA GN+ GK +K +++++VNG
Sbjct: 216 KH-WPSKKD-QKVETSSMYNIFSN---------IDACGNFLGKNVLNEKHSIIKQLDVNG 264
Query: 527 INKEAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANIL 706
I + W++ EEEEY+WE+MSPTLAD A IL
Sbjct: 265 IKSKEAATRWQNTEEEEYIWEDMSPTLADRNRGNDIRPQNSPFSSISRRNGLGRPSAAIL 324
Query: 707 EHDFRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNE--QFHHYH 880
E DF+ NW +Q DD A D + +LGSGH SM +PL G G RNE Q H
Sbjct: 325 EPDFKKGNWPDQVHFSVPDDSAAFAGDVVSILGSGHFSMGKKPLSGPGIRNESTQVQCSH 384
Query: 881 SPHHFQEPGKFPYNF-QHAPGELGSTSRGWRPQMPVP---VAAGNGQKLPSSYDNPTGNG 1048
PH EP F + F Q L +RG QM P + A Q +PS D
Sbjct: 385 YPH---EPRNFLHRFPQPLQEHLDPKARGTAVQMTFPASRIVAPASQNVPSQID------ 435
Query: 1049 QKLPSSYGNPPNIVPYQS----LLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHK 1216
K P + PP S L + ++ + S L KH+E RP V K
Sbjct: 436 -KFPDADVQPPRFSRIGSSGATSLNVEVPSAVMPASTLLKHVEQRPSLAPPIWPLVNVSK 494
Query: 1217 SQPLPLLPVPSYQRQFSSPFSLMESNKPF-NQGHNQSLFPSLQQFESADRE----TKMSS 1381
S LLPV Q Q S F +M+ N P Q + L +Q + +R +
Sbjct: 495 SHQPCLLPVIPQQNQIKSQFDIMDVNNPVKGQIPKKPLTLPVQHLDGIERNVLQFANQQA 554
Query: 1382 KVLSLPQQ 1405
++SL QQ
Sbjct: 555 GLISLNQQ 562
>ref|XP_010267732.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Nelumbo nucifera]
Length = 1049
Score = 189 bits (480), Expect = 2e-48
Identities = 153/488 (31%), Positives = 219/488 (44%), Gaps = 20/488 (4%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVLPLNANV 181
S L+ G +++YG++D + EV SP + S Q A+ +S+ E +LP +
Sbjct: 250 SSLQIYGQKPTIEYGEHDSDHGEVISPRVVVQRLDS-QGASTHSSVGSAER-LLPTKIRL 307
Query: 182 TKPLSPRVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNG-----WL 346
T+P SP + RS SP + F D+SP +V +R S HS +G + + +G WL
Sbjct: 308 TRPSSPTIGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSGSIYGPRRMTDNDGERSYQWL 367
Query: 347 ERSWPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNG 526
+ WP D +++E S+ Y+ + IDA GN+ GK +K +++++VNG
Sbjct: 368 KH-WPSKKD-QKVETSSMYNIFSN---------IDACGNFLGKNVLNEKHSIIKQLDVNG 416
Query: 527 INKEAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANIL 706
I + W++ EEEEY+WE+MSPTLAD A IL
Sbjct: 417 IKSKEAATRWQNTEEEEYIWEDMSPTLADRNRGNDIRPQNSPFSSISRRNGLGRPSAAIL 476
Query: 707 EHDFRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNE--QFHHYH 880
E DF+ NW +Q DD A D + +LGSGH SM +PL G G RNE Q H
Sbjct: 477 EPDFKKGNWPDQVHFSVPDDSAAFAGDVVSILGSGHFSMGKKPLSGPGIRNESTQVQCSH 536
Query: 881 SPHHFQEPGKFPYNF-QHAPGELGSTSRGWRPQMPVP---VAAGNGQKLPSSYDNPTGNG 1048
PH EP F + F Q L +RG QM P + A Q +PS D
Sbjct: 537 YPH---EPRNFLHRFPQPLQEHLDPKARGTAVQMTFPASRIVAPASQNVPSQID------ 587
Query: 1049 QKLPSSYGNPPNIVPYQS----LLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHK 1216
K P + PP S L + ++ + S L KH+E RP V K
Sbjct: 588 -KFPDADVQPPRFSRIGSSGATSLNVEVPSAVMPASTLLKHVEQRPSLAPPIWPLVNVSK 646
Query: 1217 SQPLPLLPVPSYQRQFSSPFSLMESNKPF-NQGHNQSLFPSLQQFESADRE----TKMSS 1381
S LLPV Q Q S F +M+ N P Q + L +Q + +R +
Sbjct: 647 SHQPCLLPVIPQQNQIKSQFDIMDVNNPVKGQIPKKPLTLPVQHLDGIERNVLQFANQQA 706
Query: 1382 KVLSLPQQ 1405
++SL QQ
Sbjct: 707 GLISLNQQ 714
>ref|XP_010267731.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Nelumbo nucifera]
Length = 1058
Score = 189 bits (480), Expect = 2e-48
Identities = 153/488 (31%), Positives = 219/488 (44%), Gaps = 20/488 (4%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRSKAGSPQTAALRTSISGVEGPVLPLNANV 181
S L+ G +++YG++D + EV SP + S Q A+ +S+ E +LP +
Sbjct: 250 SSLQIYGQKPTIEYGEHDSDHGEVISPRVVVQRLDS-QGASTHSSVGSAER-LLPTKIRL 307
Query: 182 TKPLSPRVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNG-----WL 346
T+P SP + RS SP + F D+SP +V +R S HS +G + + +G WL
Sbjct: 308 TRPSSPTIGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSGSIYGPRRMTDNDGERSYQWL 367
Query: 347 ERSWPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNG 526
+ WP D +++E S+ Y+ + IDA GN+ GK +K +++++VNG
Sbjct: 368 KH-WPSKKD-QKVETSSMYNIFSN---------IDACGNFLGKNVLNEKHSIIKQLDVNG 416
Query: 527 INKEAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANIL 706
I + W++ EEEEY+WE+MSPTLAD A IL
Sbjct: 417 IKSKEAATRWQNTEEEEYIWEDMSPTLADRNRGNDIRPQNSPFSSISRRNGLGRPSAAIL 476
Query: 707 EHDFRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNE--QFHHYH 880
E DF+ NW +Q DD A D + +LGSGH SM +PL G G RNE Q H
Sbjct: 477 EPDFKKGNWPDQVHFSVPDDSAAFAGDVVSILGSGHFSMGKKPLSGPGIRNESTQVQCSH 536
Query: 881 SPHHFQEPGKFPYNF-QHAPGELGSTSRGWRPQMPVP---VAAGNGQKLPSSYDNPTGNG 1048
PH EP F + F Q L +RG QM P + A Q +PS D
Sbjct: 537 YPH---EPRNFLHRFPQPLQEHLDPKARGTAVQMTFPASRIVAPASQNVPSQID------ 587
Query: 1049 QKLPSSYGNPPNIVPYQS----LLTDQSNTSTVETSMLEKHLELRPFSXXXXXXXXXVHK 1216
K P + PP S L + ++ + S L KH+E RP V K
Sbjct: 588 -KFPDADVQPPRFSRIGSSGATSLNVEVPSAVMPASTLLKHVEQRPSLAPPIWPLVNVSK 646
Query: 1217 SQPLPLLPVPSYQRQFSSPFSLMESNKPF-NQGHNQSLFPSLQQFESADRE----TKMSS 1381
S LLPV Q Q S F +M+ N P Q + L +Q + +R +
Sbjct: 647 SHQPCLLPVIPQQNQIKSQFDIMDVNNPVKGQIPKKPLTLPVQHLDGIERNVLQFANQQA 706
Query: 1382 KVLSLPQQ 1405
++SL QQ
Sbjct: 707 GLISLNQQ 714
>ref|XP_020674647.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Dendrobium
catenatum]
gb|PKU82431.1| hypothetical protein MA16_Dca005436 [Dendrobium catenatum]
Length = 969
Score = 188 bits (478), Expect = 3e-48
Identities = 160/467 (34%), Positives = 219/467 (46%), Gaps = 12/467 (2%)
Frame = +2
Query: 2 SRLRGCGPNSSVQYGDYDFNKPEVFSPHQTRS-KAGSPQTAALR-TSISGVEGPVLPLNA 175
S ++ G S +Y D+D + F P + + GSP T L +S+ G EGP L
Sbjct: 249 SGIQVSGHRSFTKYNDHDLDHFG-FQPSSLKMVREGSPLTLTLHGSSMEGQEGPFLSSQR 307
Query: 176 NVTKPLSP-RVRLRRSASPIENRFPRDDSPWRVAERASQPHSRLGFGLGKAVEQNGWLER 352
V +SP R+ LRRS SP +RF SP RV E S+ HS L F +A E NGW+ R
Sbjct: 308 KVASRVSPTRIGLRRSTSPQGHRFQMS-SPGRVIEATSRSHSGLDFQSHRASESNGWVGR 366
Query: 353 SWPPDVDLRQLEVSTTYDPDAGYSKKHPRELIDAYGNYRGKGTSLDKLPKLQRINVNGIN 532
+ D +Q TTY+ Y ++ RELIDAYGNYRGK + LPK+QR++VNGI
Sbjct: 367 NLAIDDGAQQSVALTTYNK---YGRQRQRELIDAYGNYRGKDFLHESLPKIQRVDVNGIK 423
Query: 533 KEAETKNWRSFEEEEYVWENMSPTLADXXXXXXXXXXXXXXXXXXXXXXXXXXDANIL-- 706
+A +W++ EEEEYVWE+MSPT D + I+
Sbjct: 424 GKAGKMDWQNSEEEEYVWEDMSPTHVDPSKRSRMQSEQSTDSLGLRDNSSR---SGIIAQ 480
Query: 707 EHDFRGNNWHEQTKHHPVDDPAIIVDDRIHVLGSGHGSMHMRPLDGKGGRNEQFHHYHSP 886
+ DFR +W P+ D +DDRI + G G M+ LD G +QF H+ S
Sbjct: 481 KSDFRRRSWPVP----PLKDSTTTIDDRIGIRHYGLGPMNKMYLDDTGSTIQQFRHHESS 536
Query: 887 HHFQEPGKFPYNFQH-APGELGSTSRGWRPQMPVPVAAGNGQKLPSSYDNPTGNGQKLPS 1063
H QE G P+ F P + S+G Q+P V G PS K S
Sbjct: 537 QHVQEHGSLPHVFHRPTPDNISPKSQGRPFQLPYLV----GGVTPSV-------NHKRHS 585
Query: 1064 SYGNPPNI-VPYQSLLTDQSNTSTVE--TSMLEK--HLELRPFSXXXXXXXXXVHKSQPL 1228
Y N N +P+ +L + S+T+ E TS +K H + P H SQ L
Sbjct: 586 FYDNSHNAEMPFLNLSSASSDTTNHEMSTSAAQKAHHPPIAP------VPWPPAHISQSL 639
Query: 1229 PLLPVPSYQRQFSSPFSLMESNKPF-NQGHNQSLFPSLQQFESADRE 1366
LLP+ + Q ++NKP NQ N S+ QQF++ R+
Sbjct: 640 QLLPIANLQ---------TDNNKPIGNQQPNFSVPFPQQQFDANGRQ 677