BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005687
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officin...    66   3e-11
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    69   1e-10
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          59   2e-07

>gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officinalis]
          Length = 125

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
 Frame = +2

Query: 152 KKMGYNFNS*QCLNFVKGR*ALIRS-FVPEGKVPDYYHITRRG--WAMPQLHSLSMANPE 322
           KK+GY+F   + LNF KGR   I+  +VPEGK  DYYH T RG  +  P L     A  E
Sbjct: 6   KKIGYDFTRKEGLNFGKGRKIPIKHVYVPEGKPEDYYHKTHRGLGYESPPLIWCFEATEE 65

Query: 323 SV--FHDHSFGTLSWESDVSIGAVLKNLSVNMVS 418
           S   F + S  +  W+SDVS GAV K L +NM S
Sbjct: 66  SEGSFTNSSSESNYWDSDVSTGAVFKELMINMTS 99


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 43/91 (47%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
 Frame = +2

Query: 152 KKMGYNFNS*QCLNFVKGR*ALIR-SFVPEGKVPDYYHITRRGWAMPQLHSLSMANPESV 328
           K+MGYNFN  + LNF KGR   +R S  PEGK  DYYH TR G       S S     + 
Sbjct: 481 KRMGYNFNEKRGLNFGKGRRTPVRMSLAPEGKPQDYYHKTRSGLGYVTTPSASEDEISNY 540

Query: 329 F-HDHSFGTLSWESDVSIGAVLKNLSVNMVS 418
              +HS    S ESDVS+G   K+L+VNM S
Sbjct: 541 LGQNHSSRISSCESDVSVGLFFKSLTVNMTS 571


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +2

Query: 224 SFVPEGKVPDYYHITRRGWAM---PQLHSLSMANPESVFHDHSFGTLSWESDVSIGAVLK 394
           S  PEGK PDYY  T RG      P      ++N   + HDHS G  S+ESDVSIG   K
Sbjct: 2   SLTPEGKPPDYYQKTGRGMGYVTPPPASENEISN--YLRHDHSSGISSYESDVSIGPFFK 59

Query: 395 NLSVNMVS 418
           NL+VNMVS
Sbjct: 60  NLTVNMVS 67