BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005680
         (3507 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255590.1| DNA-directed RNA polymerases IV and V subuni...  2017   0.0  
ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV a...  1840   0.0  
ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV a...  1832   0.0  
ref|XP_020112440.1| DNA-directed RNA polymerases IV and V subuni...  1827   0.0  
gb|OAY64687.1| DNA-directed RNA polymerases IV and V subunit 2, ...  1816   0.0  
ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV a...  1808   0.0  
ref|XP_012703111.1| DNA-directed RNA polymerases IV and V subuni...  1722   0.0  
ref|XP_020692708.1| DNA-directed RNA polymerases IV and V subuni...  1714   0.0  
gb|PAN40366.1| hypothetical protein PAHAL_G02501 [Panicum hallii...  1710   0.0  
ref|XP_020593256.1| DNA-directed RNA polymerases IV and V subuni...  1704   0.0  
ref|XP_020593257.1| DNA-directed RNA polymerases IV and V subuni...  1704   0.0  
gb|AQK46524.1| DNA-directed RNA polymerases IV and V subunit 2 [...  1701   0.0  
ref|XP_002468227.1| DNA-directed RNA polymerases IV and V subuni...  1701   0.0  
ref|XP_015636222.1| PREDICTED: DNA-directed RNA polymerases IV a...  1699   0.0  
dbj|BAF15955.1| Os04g0641000, partial [Oryza sativa Japonica Group]  1697   0.0  
emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]        1697   0.0  
ref|NP_001338873.1| required to maintain repression 7 [Zea mays]...  1696   0.0  
ref|XP_002447199.1| DNA-directed RNA polymerases IV and V subuni...  1696   0.0  
ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV a...  1694   0.0  
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...  1693   0.0  

>ref|XP_020255590.1| DNA-directed RNA polymerases IV and V subunit 2-like [Asparagus
            officinalis]
          Length = 1192

 Score = 2017 bits (5226), Expect = 0.0
 Identities = 980/1152 (85%), Positives = 1066/1152 (92%), Gaps = 2/1152 (0%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            +L  ETLE+FCK A++AFF+EFGLI HQINSFNQF+TSGLQE+FDSLGEV VEPGYDPSK
Sbjct: 41   DLKEETLERFCKDAARAFFSEFGLINHQINSFNQFITSGLQEIFDSLGEVVVEPGYDPSK 100

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
            GGGGDW+HA+I YG+VRL KP+FWTERS QE E LKLLPKHARLQNMTYSSKLKVEV+VQ
Sbjct: 101  GGGGDWQHATITYGKVRLGKPTFWTERSGQETEELKLLPKHARLQNMTYSSKLKVEVRVQ 160

Query: 411  VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 590
            V+I EKSDKAKTGKD +I KRVL+++KKEI IGS+PVMVKSK CWLDTL+KSDCLYDSGG
Sbjct: 161  VYILEKSDKAKTGKDSHICKRVLSDDKKEITIGSMPVMVKSKLCWLDTLDKSDCLYDSGG 220

Query: 591  YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 770
            YFIVKGAEK FIAQEQRCLTRLW+TD+P WTAS  SE+KK+RVYVKL+DASK+DGLNSGK
Sbjct: 221  YFIVKGAEKVFIAQEQRCLTRLWITDKPVWTASHISEMKKKRVYVKLVDASKVDGLNSGK 280

Query: 771  LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 950
            LIS+YFLYATMPVW+MFFALGA SDKEVF+MIDLDGCD  +TNIILATIRDADEQ   FR
Sbjct: 281  LISIYFLYATMPVWVMFFALGAASDKEVFEMIDLDGCDNNITNIILATIRDADEQCNDFR 340

Query: 951  AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 1130
             AG+SRDYV++LIK++KFPP+ESFDEY+ KYLFPTISGHREKA FLGYIVKCLLLG  GK
Sbjct: 341  KAGRSRDYVDSLIKNSKFPPTESFDEYVGKYLFPTISGHREKALFLGYIVKCLLLGCFGK 400

Query: 1131 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 1310
            RKCD ++DFRNKRLDLVGELL  EL A+IRHAEKRMVKAMQRDL GDRDLQLIERYWDAS
Sbjct: 401  RKCDKRDDFRNKRLDLVGELLGRELWANIRHAEKRMVKAMQRDLSGDRDLQLIERYWDAS 460

Query: 1311 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 1490
            I+TNGLNRAFSTG WCHP+ KTERCSGVVANLQRTNALQMM+ LR+TR QVAYAGKAGDA
Sbjct: 461  IVTNGLNRAFSTGQWCHPYIKTERCSGVVANLQRTNALQMMSSLRKTRQQVAYAGKAGDA 520

Query: 1491 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1670
            RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSS  NEP+LDKLVSCGMEKLDQISV+
Sbjct: 521  RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSSINEPVLDKLVSCGMEKLDQISVS 580

Query: 1671 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1850
            SLSK  K+FLNGDWIGVCSDS+ FV++FR MRR+Q+I+SQVEIKLD++Q+EVR+F+DAGR
Sbjct: 581  SLSKTYKIFLNGDWIGVCSDSRLFVLNFRQMRRAQEINSQVEIKLDQHQKEVRIFSDAGR 640

Query: 1851 LLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENGQ 2030
            LLRP                 SS+QSLVNEG+IE IGVEEEEDC  AWGIRYLLQ+ + Q
Sbjct: 641  LLRPLLIVENLKKVKSLKGGISSYQSLVNEGIIELIGVEEEEDCRAAWGIRYLLQEGSKQ 700

Query: 2031 PA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRVDTL 2204
             A  YTHC+ DPSF++GLSCGIIPFANHN ARRVLFQAQKHSHQA+GFSTTNP IRVDTL
Sbjct: 701  AAIPYTHCELDPSFLLGLSCGIIPFANHNLARRVLFQAQKHSHQAVGFSTTNPDIRVDTL 760

Query: 2205 MHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQEDSL 2384
            MHQMYYPQRPLF+TV+ADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVH GYNQEDSL
Sbjct: 761  MHQMYYPQRPLFRTVVADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHLGYNQEDSL 820

Query: 2385 VMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLEDDGFP 2564
            VMNRASLERGMFRTEHFRSYKAEV+NKE++KRIK+KDKVEF KMQSKKGRVDSLEDDGFP
Sbjct: 821  VMNRASLERGMFRTEHFRSYKAEVENKEITKRIKLKDKVEFGKMQSKKGRVDSLEDDGFP 880

Query: 2565 FIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSP 2744
            +IGACLQ+GDIVIGKVAESG+DHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSP
Sbjct: 881  WIGACLQTGDIVIGKVAESGEDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSP 940

Query: 2745 CLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAALGKG 2924
            CLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA+LGKG
Sbjct: 941  CLGDKFSSMHGQKGVVGFLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLLEASLGKG 1000

Query: 2925 IACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPTFYQR 3104
            IA GGK+TYATPFTTPSVDVI EQLH L FQRWG+ERVLNGRTGE+M++MIF GPTFYQR
Sbjct: 1001 IALGGKITYATPFTTPSVDVIAEQLHRLNFQRWGAERVLNGRTGELMQTMIFTGPTFYQR 1060

Query: 3105 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFTL 3284
            LIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFTL
Sbjct: 1061 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFTL 1120

Query: 3285 SDFSQMHICRTCSRPANVIQRALSNGNVRGPYCGFCKSAENIVRINVPYGAKLLFQELFS 3464
            SDFSQMH+CRTCSR ANVIQR +SNG +RGPYCGFCKS EN+VRINVPYGAKLLFQELFS
Sbjct: 1121 SDFSQMHVCRTCSRFANVIQRVVSNGKIRGPYCGFCKSGENVVRINVPYGAKLLFQELFS 1180

Query: 3465 MGICLKFETEVC 3500
            MGICLKFETEVC
Sbjct: 1181 MGICLKFETEVC 1192


>ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Phoenix dactylifera]
          Length = 1189

 Score = 1840 bits (4765), Expect = 0.0
 Identities = 885/1164 (76%), Positives = 1017/1164 (87%), Gaps = 14/1164 (1%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            N+NV +LEKFCK A+++FF E+GLI HQINS+N+F+  G+Q+LFDSLGEV+VEPGYDPSK
Sbjct: 26   NMNVGSLEKFCKEAARSFFAEWGLISHQINSYNEFIGHGIQDLFDSLGEVNVEPGYDPSK 85

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
              G +WRHA++ +G+VRL+KPSFW+ R D  +E LKLLP+HARLQNMTYSS+LKVEV+VQ
Sbjct: 86   KRGAEWRHATVSFGKVRLEKPSFWSGRDDLPEENLKLLPRHARLQNMTYSSQLKVEVRVQ 145

Query: 411  VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 590
            V+ QEKSDKAKTGKD YI K V++++KKEI IG IPVM++SK CWL TL+KSDCL+DSGG
Sbjct: 146  VYTQEKSDKAKTGKDAYIHKNVVSDKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDSGG 205

Query: 591  YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 770
            YF++KG EK FIAQEQR L R+W+TD+P+WT S  SE+K++R+Y+KL++A K +G + GK
Sbjct: 206  YFLIKGMEKTFIAQEQRHLARVWVTDKPSWTVSYLSEMKRKRIYIKLVEAPKAEGFSGGK 265

Query: 771  LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYE--- 941
            +++ +FLYAT+PVWIMFFALGA+SDKEVF+MIDL      L NIILAT+++ADE Y+   
Sbjct: 266  VVNFFFLYATIPVWIMFFALGASSDKEVFEMIDLGESSADLINIILATVKNADEHYKKFR 325

Query: 942  --------GFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYI 1097
                     FR   K++DYVN+ +K +KFPPSESFDEY+ K+LFP ISGHR+KA FLGY+
Sbjct: 326  EDADEHDKNFRRVDKAQDYVNSQVKVSKFPPSESFDEYVDKFLFPNISGHRQKALFLGYM 385

Query: 1098 VKCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRD 1277
            VKCLLL   GKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAE+RMVKAMQRDL+GDRD
Sbjct: 386  VKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYGDRD 445

Query: 1278 LQLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRL 1457
            LQLIERY DASIITNGLNRAFSTG WCHP+++TERCSG+VA L+RTN LQMM+DLR+TR 
Sbjct: 446  LQLIERYLDASIITNGLNRAFSTGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRKTRQ 505

Query: 1458 QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSC 1637
            QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTALVS +  EPILDKL+SC
Sbjct: 506  QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTALVSLKVTEPILDKLISC 565

Query: 1638 GMEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQ 1817
            GMEKLD+IS++S+S MDKVF+NGDW+GVC+DS SFV   R MRR++ I  QVEIK D++Q
Sbjct: 566  GMEKLDEISLSSISNMDKVFMNGDWVGVCADSTSFVAKLRCMRRARLIHPQVEIKRDKHQ 625

Query: 1818 REVRVFTDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWG 1997
            REVR+F+DAGR+LRP                  SFQ L++EG+IE IGVEEEEDC TAWG
Sbjct: 626  REVRIFSDAGRILRPLLIVENLKKTSKLKGGVCSFQYLMDEGIIELIGVEEEEDCHTAWG 685

Query: 1998 IRYLLQQENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFS 2171
            IR+L   + G PA  Y+HC+ D SF++GLSCGIIPFANHN+ARRVL+QA+KHS QAIGFS
Sbjct: 686  IRHLFMGDEGGPAPKYSHCELDVSFLLGLSCGIIPFANHNFARRVLYQAEKHSQQAIGFS 745

Query: 2172 TTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVN 2351
            TTNP IRVDTL HQ+YYPQ+PLF+TVIADCLGR DYSL  KD M RPE FNGQNAIVAVN
Sbjct: 746  TTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRADYSLRRKDSMPRPEYFNGQNAIVAVN 805

Query: 2352 VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKG 2531
            VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEV+NKE++KR K++DKV+F KMQSKKG
Sbjct: 806  VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKELTKRFKLRDKVDFGKMQSKKG 865

Query: 2532 RVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNF 2711
            RVDSL+DDGFP+IGA LQSGDIVIGKVAESG+DH  KLKHTEKGMVQKVVLSANDEGKNF
Sbjct: 866  RVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSANDEGKNF 925

Query: 2712 AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTP 2891
            AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTP
Sbjct: 926  AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTP 985

Query: 2892 GQLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRS 3071
            GQLLEAALGKGIACGG V YATPFTT SVDVITEQLH   F RWGSE+VLNGRTGE+MRS
Sbjct: 986  GQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGRTGEVMRS 1045

Query: 3072 MIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 3251
            MIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA
Sbjct: 1046 MIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 1105

Query: 3252 AANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNGN-VRGPYCGFCKSAENIVRINVP 3428
            A+NLHERLFTLSDFSQMHIC+TC R ANVI R +  GN +RGPYC +C+S+ENIV+INVP
Sbjct: 1106 ASNLHERLFTLSDFSQMHICQTCKRAANVILRPVVGGNKIRGPYCNYCQSSENIVKINVP 1165

Query: 3429 YGAKLLFQELFSMGICLKFETEVC 3500
            YGAKLL+QELFSMGICLKF+TEVC
Sbjct: 1166 YGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Elaeis
            guineensis]
          Length = 1189

 Score = 1832 bits (4745), Expect = 0.0
 Identities = 883/1164 (75%), Positives = 1013/1164 (87%), Gaps = 14/1164 (1%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            ++NV +LEKFCK A+++FF E+GLI HQINS+N+F+  G+Q+LFDSLGEV+VEPGYDPSK
Sbjct: 26   DMNVGSLEKFCKEAARSFFAEWGLISHQINSYNEFIEHGIQDLFDSLGEVNVEPGYDPSK 85

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
              G +WRHA++ +G+VRL+KPSFW+ R D  +E LKLLP+HARLQNMTYSS++KVEV+V 
Sbjct: 86   KRGAEWRHATVSFGKVRLEKPSFWSGRDDLPEENLKLLPRHARLQNMTYSSQMKVEVRVL 145

Query: 411  VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 590
            V+ QEKSDKAKTGKD YI K V++++KKEI IG IPVM++SK CWL TL+KSDCL+DSGG
Sbjct: 146  VYTQEKSDKAKTGKDAYIVKNVVSDKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDSGG 205

Query: 591  YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 770
            YF++KG EK FIAQEQR L R+W+TD+P+W  S  SEIK++R+Y+KL++A K +G + GK
Sbjct: 206  YFLIKGMEKTFIAQEQRHLARVWVTDKPSWAVSYLSEIKRKRIYIKLVEAPKAEGFSGGK 265

Query: 771  LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYE--- 941
            +++ +FLYAT+PVWIMFFALGA+SDKEVF+MIDL      L NIILAT+++ADE Y+   
Sbjct: 266  VVNFFFLYATIPVWIMFFALGASSDKEVFEMIDLGESSADLINIILATVKNADEHYKKFR 325

Query: 942  --------GFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYI 1097
                     FR   K++DYVN  +K +KFPPSESFDEY+ K+LFP I GHR+KA FLGY+
Sbjct: 326  EDADEHDKNFRRIDKAQDYVNGQVKVSKFPPSESFDEYVDKFLFPNIYGHRQKALFLGYM 385

Query: 1098 VKCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRD 1277
            VKCLLL   GKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAE+RMVKAMQRDL+GDRD
Sbjct: 386  VKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYGDRD 445

Query: 1278 LQLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRL 1457
            LQLIERY DASIITNGLNRAFSTG WCHP+++TERCSG+VA L+RTN LQMM+DLR+TR 
Sbjct: 446  LQLIERYLDASIITNGLNRAFSTGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRKTRQ 505

Query: 1458 QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSC 1637
            QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTALVS +  EPILDKL+SC
Sbjct: 506  QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTALVSLKVTEPILDKLISC 565

Query: 1638 GMEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQ 1817
            GMEKLD+IS+TS+S MDKVFLNGDW+GVC+DS SFV   R MRR+  I SQVEIK D++Q
Sbjct: 566  GMEKLDEISLTSVSSMDKVFLNGDWVGVCADSSSFVARLRCMRRATLIHSQVEIKRDKHQ 625

Query: 1818 REVRVFTDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWG 1997
            REVR+F+DAGR+LRP                  SFQ L+++G+IE IGVEEEEDC TAWG
Sbjct: 626  REVRIFSDAGRILRPLLIVENLEKISKLKGGVCSFQHLMDQGIIELIGVEEEEDCPTAWG 685

Query: 1998 IRYLLQQENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFS 2171
            IR+L   + GQPA  YTHC+ D SF++GLSCGIIPFANHN+ARRVL+QA+KHS QAIGFS
Sbjct: 686  IRHLFMGDEGQPAPKYTHCELDVSFLLGLSCGIIPFANHNFARRVLYQAEKHSQQAIGFS 745

Query: 2172 TTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVN 2351
            TTNP IRVDTL HQ+YYPQ+PLF+TVIADCLGR  +SLG KD M RPE FNGQNAIVAVN
Sbjct: 746  TTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRAVHSLGRKDSMPRPEYFNGQNAIVAVN 805

Query: 2352 VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKG 2531
            VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEV+NKE++KR K++DKV+F KMQSKKG
Sbjct: 806  VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKELTKRFKLRDKVDFGKMQSKKG 865

Query: 2532 RVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNF 2711
            +VDSL+DDGFP+IGA LQSGDIVIGKVAESG+DH  KLKHTEKGMVQKVVLSANDEGKNF
Sbjct: 866  KVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSANDEGKNF 925

Query: 2712 AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTP 2891
            AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTP
Sbjct: 926  AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTP 985

Query: 2892 GQLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRS 3071
            GQLLEAALGKGIACGG V YATPFTT SVDVITEQLH   F RWGSE+VLNGRTGE+MRS
Sbjct: 986  GQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGRTGEVMRS 1045

Query: 3072 MIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 3251
            MIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA
Sbjct: 1046 MIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 1105

Query: 3252 AANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNGN-VRGPYCGFCKSAENIVRINVP 3428
            A+NLHERLF LSDFSQMHIC+TC R ANVI R +  GN +RGPYC FC+S+ENIV+INVP
Sbjct: 1106 ASNLHERLFMLSDFSQMHICQTCRRAANVILRPVVGGNKIRGPYCNFCQSSENIVKINVP 1165

Query: 3429 YGAKLLFQELFSMGICLKFETEVC 3500
            YGAKLL+QELFSMGICLKF+TEVC
Sbjct: 1166 YGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_020112440.1| DNA-directed RNA polymerases IV and V subunit 2-like [Ananas comosus]
 ref|XP_020112441.1| DNA-directed RNA polymerases IV and V subunit 2-like [Ananas comosus]
          Length = 1201

 Score = 1827 bits (4732), Expect = 0.0
 Identities = 875/1158 (75%), Positives = 1010/1158 (87%), Gaps = 8/1158 (0%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            +++V +LEKFCK A++AFFN++GLI HQINS+N+F+  GLQ+LFDSLGE++VEPGYDPSK
Sbjct: 44   DMSVASLEKFCKEAARAFFNDWGLISHQINSYNEFIAHGLQDLFDSLGEITVEPGYDPSK 103

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
             GG  WRHA+I +G+V L+KP FW+ ++D E+ECLKL P+HARLQNMTYSS++KVEV+VQ
Sbjct: 104  KGGSAWRHATISFGKVSLEKPVFWSGKNDYEEECLKLTPRHARLQNMTYSSQMKVEVRVQ 163

Query: 411  VFIQEKSDKAKTGKDPY-----ISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            V+  EKSDKAK+GKD       + KRV  +EKKEI IG +PVMV+S  CWL+TL KSDCL
Sbjct: 164  VYSHEKSDKAKSGKDQSGKDQSVHKRVWADEKKEITIGRLPVMVRSNLCWLNTLGKSDCL 223

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +DSGGYF++KG EK FIAQEQRCLTRLW+TD+P WT S  SEIK++R+Y+KLL++ K +G
Sbjct: 224  FDSGGYFLIKGMEKTFIAQEQRCLTRLWVTDRPVWTVSYISEIKRKRIYIKLLESPKAEG 283

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             N  ++IS+YFLYAT P+W+MFFALGA+SDKE+F+MIDL+ C   + NI+LATI++ DEQ
Sbjct: 284  SNGRRVISLYFLYATAPIWLMFFALGASSDKEIFEMIDLEDCSASIVNILLATIKETDEQ 343

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
            +EGFR   K+R+Y+N  IK+AKFPPSESFDEY+SKYLFP +SGHR+KA  LGY+VKCLLL
Sbjct: 344  FEGFRKEDKAREYINEQIKNAKFPPSESFDEYVSKYLFPGVSGHRQKALSLGYMVKCLLL 403

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             +SGKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAEKRMVK MQRDL+GDRDLQLIER
Sbjct: 404  AFSGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVKTMQRDLYGDRDLQLIER 463

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            YWDASIITNG+NRAFSTG WCHP+++TER SG+VA L+RTN LQMM+DLR+TR QVAYAG
Sbjct: 464  YWDASIITNGINRAFSTGAWCHPYKRTERISGIVATLRRTNPLQMMSDLRKTRQQVAYAG 523

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSSR  EPILDKLVSCGMEKLD
Sbjct: 524  KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRIMEPILDKLVSCGMEKLD 583

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
            +  ++S +KMDKVFLNGDWIGVC+D  SFV SFR MRR++ I +QVEIK D++Q+EVR+F
Sbjct: 584  ESPLSSTTKMDKVFLNGDWIGVCADPSSFVESFRCMRRNKVIHAQVEIKRDKHQKEVRIF 643

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            +DAGR++RP                  SFQ L+++ +IE IGVEEEED  TAWG+R+L  
Sbjct: 644  SDAGRIMRPLLVVDNLKKIKNLKGGSYSFQYLMDQEIIELIGVEEEEDLQTAWGVRHLFV 703

Query: 2016 QENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGI 2189
             + G+P   Y+H + + SF+MGLSCGIIPFANHN+ARRVL+Q++KHS QAIGFSTTNP I
Sbjct: 704  GDKGEPIPKYSHSELELSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNI 763

Query: 2190 RVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYN 2369
            RVDTL HQ+YYPQRPLFKTVIADCLGR DYS G KD ++RPE FNGQNAIVAVNVHQGYN
Sbjct: 764  RVDTLSHQLYYPQRPLFKTVIADCLGRTDYSPGRKDDVARPEYFNGQNAIVAVNVHQGYN 823

Query: 2370 QEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLE 2549
            QEDSLVMNR SLERGMFRTEHFRSYKAEV+NK+ + R+K KDKV+F K QSKKGRVDSL+
Sbjct: 824  QEDSLVMNRTSLERGMFRTEHFRSYKAEVENKDFTNRLKPKDKVDFGKTQSKKGRVDSLD 883

Query: 2550 DDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLR 2729
            DDG P+I A LQSGDIVIGKVAESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLR
Sbjct: 884  DDGLPYISASLQSGDIVIGKVAESGEDHSIKLKHTEKGMVQKVILSANDEGKNFAVVTLR 943

Query: 2730 QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEA 2909
            QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA
Sbjct: 944  QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEA 1003

Query: 2910 ALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGP 3089
            ALGKGIACGG   YATPFTTPSVDVITEQLH   + RWGSE+VLNGRTGE+MRSMIF+GP
Sbjct: 1004 ALGKGIACGGSARYATPFTTPSVDVITEQLHRAGYSRWGSEKVLNGRTGEMMRSMIFMGP 1063

Query: 3090 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 3269
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE
Sbjct: 1064 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 1123

Query: 3270 RLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLL 3446
            RLF LSDFSQMHIC+TC R ANVI R +  G  +RGP+CGFC+SAENIV+INVPYGAKLL
Sbjct: 1124 RLFMLSDFSQMHICQTCKRAANVILRPVPGGKKIRGPFCGFCRSAENIVKINVPYGAKLL 1183

Query: 3447 FQELFSMGICLKFETEVC 3500
            +QELFS GICLKFETEVC
Sbjct: 1184 YQELFSTGICLKFETEVC 1201


>gb|OAY64687.1| DNA-directed RNA polymerases IV and V subunit 2, partial [Ananas
            comosus]
          Length = 1228

 Score = 1816 bits (4703), Expect = 0.0
 Identities = 875/1177 (74%), Positives = 1010/1177 (85%), Gaps = 27/1177 (2%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            +++V +LEKFCK A++AFFN++GLI HQINS+N+F+  GLQ+LFDSLGE++VEPGYDPSK
Sbjct: 52   DMSVASLEKFCKEAARAFFNDWGLISHQINSYNEFIAHGLQDLFDSLGEITVEPGYDPSK 111

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
             GG  WRHA+I +G+V L+KP FW+ ++D E+ECLKL P+HARLQNMTYSS++KVEV+VQ
Sbjct: 112  KGGSAWRHATISFGKVSLEKPVFWSGKNDYEEECLKLTPRHARLQNMTYSSQMKVEVRVQ 171

Query: 411  VFIQEKSDKAKTGKDPY-----ISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            V+  EKSDKAK+GKD       + KRV  +EKKEI IG +PVMV+S  CWL+TL KSDCL
Sbjct: 172  VYSHEKSDKAKSGKDQSGKDQSVHKRVWADEKKEITIGRLPVMVRSNLCWLNTLGKSDCL 231

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +DSGGYF++KG EK FIAQEQRCLTRLW+TD+P WT S  SEIK++R+Y+KLL++ K +G
Sbjct: 232  FDSGGYFLIKGMEKTFIAQEQRCLTRLWVTDRPVWTVSYISEIKRKRIYIKLLESPKAEG 291

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             N  ++IS+YFLYAT P+W+MFFALGA+SDKE+F+MIDL+ C   + NI+LATI++ DEQ
Sbjct: 292  SNGRRVISLYFLYATAPIWLMFFALGASSDKEIFEMIDLEDCSASIVNILLATIKETDEQ 351

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
            +EGFR   K+R+Y+N  IK+AKFPPSESFDEY+SKYLFP +SGHR+KA  LGY+VKCLLL
Sbjct: 352  FEGFRKEDKAREYINEQIKNAKFPPSESFDEYVSKYLFPGVSGHRQKALSLGYMVKCLLL 411

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             +SGKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAEKRMVK MQRDL+GDRDLQLIER
Sbjct: 412  AFSGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVKTMQRDLYGDRDLQLIER 471

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            YWDASIITNG+NRAFSTG WCHP+++TER SG+VA L+RTN LQMM+DLR+TR QVAYAG
Sbjct: 472  YWDASIITNGINRAFSTGAWCHPYKRTERISGIVATLRRTNPLQMMSDLRKTRQQVAYAG 531

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSSR  EPILDKLVSCGMEKLD
Sbjct: 532  KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRIMEPILDKLVSCGMEKLD 591

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
            +  ++S +KMDKVFLNGDWIGVC+D  SFV SFR MRR++ I +QVEIK D++Q+EVR+F
Sbjct: 592  ESPLSSTTKMDKVFLNGDWIGVCADPSSFVESFRCMRRNKVIHAQVEIKRDKHQKEVRIF 651

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            +DAGR++RP                  SFQ L+++ +IE IGVEEEED  TAWG+R+L  
Sbjct: 652  SDAGRIMRPLLVVDNLKKIKNLKGGSYSFQYLMDQEIIELIGVEEEEDLQTAWGVRHLFV 711

Query: 2016 QENGQ--PAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGI 2189
             + G+  P Y+H + + SF+MGLSCGIIPFANHN+ARRVL+Q++KHS QAIGFSTTNP I
Sbjct: 712  GDKGEPIPKYSHSELELSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNI 771

Query: 2190 RVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYN 2369
            RVDTL HQ+YYPQRPLFKTVIADCLGR DYS G KD ++RPE FNGQNAIVAVNVHQGYN
Sbjct: 772  RVDTLSHQLYYPQRPLFKTVIADCLGRTDYSPGRKDDVARPEYFNGQNAIVAVNVHQGYN 831

Query: 2370 QEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLE 2549
            QEDSLVMNR SLERGMFRTEHFRSYKAEV+NK+ + R+K KDKV+F K QSKKGRVDSL+
Sbjct: 832  QEDSLVMNRTSLERGMFRTEHFRSYKAEVENKDFTNRLKPKDKVDFGKTQSKKGRVDSLD 891

Query: 2550 DDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLR 2729
            DDG P+I A LQSGDIVIGKVAESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLR
Sbjct: 892  DDGLPYISASLQSGDIVIGKVAESGEDHSIKLKHTEKGMVQKVILSANDEGKNFAVVTLR 951

Query: 2730 QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEA 2909
            QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA
Sbjct: 952  QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEA 1011

Query: 2910 ALGKGIACGGKVTYATPFTTPSVDVITEQLH-------------------SLKFQRWGSE 3032
            ALGKGIACGG   YATPFTTPSVDVITEQLH                      + RWGSE
Sbjct: 1012 ALGKGIACGGSARYATPFTTPSVDVITEQLHRRVKFTLTVICRVKCYVLMEAGYSRWGSE 1071

Query: 3033 RVLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 3212
            +VLNGRTGE+MRSMIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF
Sbjct: 1072 KVLNGRTGEMMRSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1131

Query: 3213 GEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGF 3389
            GEMERDCLLAHGAAANLHERLF LSDFSQMHIC+TC R ANVI R +  G  +RGP+CGF
Sbjct: 1132 GEMERDCLLAHGAAANLHERLFMLSDFSQMHICQTCKRAANVILRPVPGGKKIRGPFCGF 1191

Query: 3390 CKSAENIVRINVPYGAKLLFQELFSMGICLKFETEVC 3500
            C+SAENIV+INVPYGAKLL+QELFS GICLKFETEVC
Sbjct: 1192 CRSAENIVKINVPYGAKLLYQELFSTGICLKFETEVC 1228


>ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
            acuminata subsp. malaccensis]
 ref|XP_009413519.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
            acuminata subsp. malaccensis]
          Length = 1198

 Score = 1808 bits (4682), Expect = 0.0
 Identities = 875/1154 (75%), Positives = 995/1154 (86%), Gaps = 3/1154 (0%)
 Frame = +3

Query: 48   TNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPS 227
            ++LN+  LEKFCK A++AFF E+GLI HQI+S+N FV  G+Q+LFD+LG+V VEPGYDPS
Sbjct: 45   SDLNIGNLEKFCKEAARAFFKEWGLINHQISSYNDFVEHGIQDLFDTLGDVVVEPGYDPS 104

Query: 228  KGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKV 407
            K G G WRHASI +G+VRL+KP FW E++D E+  LKLLP+HARLQNMTYSS++KV+V+V
Sbjct: 105  KKGDGAWRHASITFGKVRLEKPEFWPEKNDIEEGSLKLLPRHARLQNMTYSSQMKVKVRV 164

Query: 408  QVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSG 587
            QV++QEKSDKAK G   YI KRV  +++ EI IG +PVMV+S  CWL  L KSDCL+DSG
Sbjct: 165  QVYVQEKSDKAKIGNSSYIQKRVQNDDEGEITIGRLPVMVQSNLCWLSALGKSDCLFDSG 224

Query: 588  GYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSG 767
            GYF++KG EK FI QEQRCLTRLW+ D+P  T S  SEIK++R+YVKL++A K +G + G
Sbjct: 225  GYFLIKGMEKTFIGQEQRCLTRLWVIDKPVATVSYLSEIKRKRIYVKLVEAPKAEGFHGG 284

Query: 768  KLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGF 947
            K+ISVYFLYATMP+WIMFFALGA+SDKEV +MIDL  CD  + NIILATI+DADEQ+EGF
Sbjct: 285  KVISVYFLYATMPIWIMFFALGASSDKEVLEMIDLKDCDAGMINIILATIKDADEQFEGF 344

Query: 948  RAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSG 1127
            R+  K+R++VN LIK+AKFPPSESFDEY++KYLFP I GHR KAHFLGY+VKCLLL   G
Sbjct: 345  RSLDKAREHVNALIKNAKFPPSESFDEYVAKYLFPNIIGHRTKAHFLGYMVKCLLLSSFG 404

Query: 1128 KRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDA 1307
            KRKCDNK+DFRNKRLDL GELLA ELRAHIRHAEKRMV+AMQRDL GDRDLQ IERY DA
Sbjct: 405  KRKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVRAMQRDLSGDRDLQPIERYLDA 464

Query: 1308 SIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGD 1487
            SIITNGLNRAFSTG W HP++KTER SG+VA L+RTN LQMM+D+R+TR QVAYAGKAGD
Sbjct: 465  SIITNGLNRAFSTGAWTHPYKKTERLSGIVATLRRTNPLQMMSDMRKTRQQVAYAGKAGD 524

Query: 1488 ARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISV 1667
            ARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSS+  EPILDKL++CGMEKLD+IS+
Sbjct: 525  ARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKIMEPILDKLIACGMEKLDEISL 584

Query: 1668 TSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAG 1847
            +SLS+M KVFLNGDW+GVC D  SF    R MRR++ I  QVEIK D++Q+EVR+FTDAG
Sbjct: 585  SSLSQMHKVFLNGDWVGVCPDMSSFADRLRSMRRAKLIHPQVEIKRDKHQKEVRIFTDAG 644

Query: 1848 RLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENG 2027
            R+LRP                  SFQSL+++ +IE IGVEEEEDC TAWGI+YLL    G
Sbjct: 645  RILRPLLIVENLKKIRNLKGGVCSFQSLMDQEIIELIGVEEEEDCQTAWGIKYLLAVNEG 704

Query: 2028 --QPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRVDT 2201
               P Y+HC+ DPSF++GLSCGIIPFA+HN+ARRVL+Q++KHS QAIGFSTTNP IRVDT
Sbjct: 705  ISAPNYSHCELDPSFLLGLSCGIIPFASHNFARRVLYQSEKHSQQAIGFSTTNPSIRVDT 764

Query: 2202 LMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQEDS 2381
            L H +YYPQ PLF+TVIADCL R DYSLG KD M+RPE FNGQNAIVAVNVHQGYNQEDS
Sbjct: 765  LSHHLYYPQTPLFRTVIADCLVRADYSLGRKDSMTRPEYFNGQNAIVAVNVHQGYNQEDS 824

Query: 2382 LVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLEDDGF 2561
            LVMNR SLERGMFRTEHFRSYKA+VDNKE++KRIK+KDKV F K++SKKGRVDSL+DDGF
Sbjct: 825  LVMNRTSLERGMFRTEHFRSYKADVDNKELTKRIKLKDKVAFGKIESKKGRVDSLDDDGF 884

Query: 2562 PFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRS 2741
            P+IGA LQSGDIVIGKVAESGDDHS KLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRS
Sbjct: 885  PYIGASLQSGDIVIGKVAESGDDHSIKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRS 944

Query: 2742 PCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAALGK 2921
            PCLGDKFSSMHGQKGV+GFLE+QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAALGK
Sbjct: 945  PCLGDKFSSMHGQKGVIGFLETQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGK 1004

Query: 2922 GIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPTFYQ 3101
            GIAC G   YATPF+T SVD IT QLH   + RWGSERVLNGRTGE+M SMIF+GPTFYQ
Sbjct: 1005 GIACEGSKRYATPFSTASVDDITAQLHRAGYSRWGSERVLNGRTGEMMHSMIFMGPTFYQ 1064

Query: 3102 RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFT 3281
            RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLF 
Sbjct: 1065 RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFM 1124

Query: 3282 LSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLLFQEL 3458
            LSDF QMHIC+ C R  NVI R +  G  +RGPYCGFC+S ENIVRINVPYGAKLL+QEL
Sbjct: 1125 LSDFFQMHICQKCQRAVNVILRPVPGGKKIRGPYCGFCQSGENIVRINVPYGAKLLYQEL 1184

Query: 3459 FSMGICLKFETEVC 3500
            FSMGICLKFETEVC
Sbjct: 1185 FSMGICLKFETEVC 1198


>ref|XP_012703111.1| DNA-directed RNA polymerases IV and V subunit 2 [Setaria italica]
 ref|XP_022684018.1| DNA-directed RNA polymerases IV and V subunit 2 [Setaria italica]
 gb|KQK99160.1| hypothetical protein SETIT_009201mg [Setaria italica]
          Length = 1234

 Score = 1722 bits (4460), Expect = 0.0
 Identities = 818/1170 (69%), Positives = 990/1170 (84%), Gaps = 8/1170 (0%)
 Frame = +3

Query: 15   MEGELKG---SDPKTN----LNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQ 173
            ++G+  G   S+P +N    ++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQ
Sbjct: 68   LDGDANGKSSSEPYSNVPIDMSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQ 127

Query: 174  ELFDSLGEVSVEPGYDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKH 353
            +LFDSLG+V VEPGYDPSK G G W+HA IK+GRV+L+KP FW+ + + +   +   P+H
Sbjct: 128  KLFDSLGDVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWSGKDEVD---IDFKPRH 184

Query: 354  ARLQNMTYSSKLKVEVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKS 533
            ARLQNMTY+S++KVEV ++V+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS
Sbjct: 185  ARLQNMTYASRIKVEVTIKVYSLEKSDKSKTGNDDFVQKRDFMNETHWIYIGRLPVMVKS 244

Query: 534  KQCWLDTLEKSDCLYDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKR 713
              C L  L++SDCL+D+GGYF+VKG EK FIAQEQRCL+RLW++D+P WT S  SEIK+R
Sbjct: 245  NLCLLHNLKESDCLFDAGGYFLVKGMEKVFIAQEQRCLSRLWISDRPCWTVSFMSEIKRR 304

Query: 714  RVYVKLLDASKIDGLNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKL 893
            R+Y+KL++++K D  +  K+IS+ FLYATMP+W+MFFALG +SDKEVF +ID+   D  +
Sbjct: 305  RIYIKLVESTKSDDFSGSKIISISFLYATMPIWLMFFALGISSDKEVFDVIDMQDGDASV 364

Query: 894  TNIILATIRDADEQYEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHRE 1073
             N I ATI+++DE  EGFR + K+R YV+ L+K+++FPP+ESFD+Y+ ++LFP ISGHR 
Sbjct: 365  INTISATIKESDELCEGFRKSDKARQYVDELVKNSRFPPAESFDDYVDRFLFPDISGHRN 424

Query: 1074 KAHFLGYIVKCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQ 1253
            KA FLGY+VKCLL+ ++GKRKCDNK+DFRNKRLDL GELLA ELRAHIR AE+RMVKA+Q
Sbjct: 425  KALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLARELRAHIRLAERRMVKAIQ 484

Query: 1254 RDLHGDRDLQLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMM 1433
            RDL+ DR+LQ +ERY DASI+TNGLNRAFSTG WCHP++KTERCSG+VA L+RTN LQM+
Sbjct: 485  RDLNSDRELQDLERYLDASIVTNGLNRAFSTGSWCHPYKKTERCSGIVATLRRTNPLQMI 544

Query: 1434 ADLRRTRLQVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEP 1613
            +DLR+TR +VAYAGKAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P
Sbjct: 545  SDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVEQP 604

Query: 1614 ILDKLVSCGMEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQV 1793
            +++  +SCGM KL++I   ++ +MDK+FLNG+W+G C+DS SFV+  R MRRS  I  QV
Sbjct: 605  LIESFISCGMSKLNEIPTENIQRMDKIFLNGNWVGCCTDSASFVLRLRCMRRSSLIHPQV 664

Query: 1794 EIKLDRYQREVRVFTDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEE 1973
            EIK D++Q+EVRVF++AGR+LRP                  SFQ L+ + +IEFIGVEEE
Sbjct: 665  EIKRDKHQKEVRVFSEAGRILRPLLVVENLNKIRKPKGRSYSFQELIQQEIIEFIGVEEE 724

Query: 1974 EDCITAWGIRYLLQQENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSH 2153
            ED   AWGIR+L   E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS 
Sbjct: 725  EDIQCAWGIRHLFGSEGEISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQ 784

Query: 2154 QAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQN 2333
            QAIG+STTNP IRVDTL HQ+YYPQRPLFKTVIADCLGR DY++G +D  +RPE FNGQN
Sbjct: 785  QAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTIGRRDDFARPEYFNGQN 844

Query: 2334 AIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAK 2513
            AIVAVNVHQG+NQEDSLVMNRASLERGMFRTEH RSYKA+V+NK+++KR+K+K+K++F K
Sbjct: 845  AIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADVENKDVTKRLKMKEKIDFGK 904

Query: 2514 MQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSAN 2693
            M+SK+GRVD+L+DDG P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSAN
Sbjct: 905  MESKRGRVDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSAN 964

Query: 2694 DEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAF 2873
            DEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAF
Sbjct: 965  DEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTRDGIVPDIVINPHAF 1024

Query: 2874 PTRQTPGQLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRT 3053
            PTRQTPGQLLEAALGKGIA GG + YATPFTT SVDVI EQLH   F +WG+E V+NGRT
Sbjct: 1025 PTRQTPGQLLEAALGKGIALGGTMRYATPFTTASVDVIAEQLHKAGFSKWGAESVINGRT 1084

Query: 3054 GEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC 3233
            GE M+SM+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC
Sbjct: 1085 GERMQSMVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDC 1144

Query: 3234 LLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENI 3410
            LLAHGAAANLHERLF LSDFSQMHIC+ C R ANVI R +  G  +RGPYCGFCKS+ENI
Sbjct: 1145 LLAHGAAANLHERLFMLSDFSQMHICQKCERVANVIMRCVPGGKKIRGPYCGFCKSSENI 1204

Query: 3411 VRINVPYGAKLLFQELFSMGICLKFETEVC 3500
            VRINVPYGAKLL+QELFSMGICLKFETEVC
Sbjct: 1205 VRINVPYGAKLLYQELFSMGICLKFETEVC 1234


>ref|XP_020692708.1| DNA-directed RNA polymerases IV and V subunit 2-like [Dendrobium
            catenatum]
 gb|PKU59764.1| DNA-directed RNA polymerase D subunit 2a [Dendrobium catenatum]
          Length = 1214

 Score = 1714 bits (4439), Expect = 0.0
 Identities = 824/1155 (71%), Positives = 982/1155 (85%), Gaps = 4/1155 (0%)
 Frame = +3

Query: 45   KTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDP 224
            + ++++E LEKF K AS+AFFNE+GL+ HQINS+N FV +GLQ+LFDSLGEV+VEP Y+P
Sbjct: 61   RLDMSMEMLEKFFKDASRAFFNEYGLVSHQINSYNDFVKNGLQDLFDSLGEVAVEPDYNP 120

Query: 225  SKG-GGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEV 401
                G G W+HA++ +G+VRL+KP FW E++D E++ LKL PKHARLQNMTYSS++KV+V
Sbjct: 121  QDAKGDGAWKHATVSFGKVRLEKPVFWVEKNDLEEQELKLTPKHARLQNMTYSSQMKVKV 180

Query: 402  KVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYD 581
            +VQV++ + SDKAKTG+D  + KRV+ +++ EIV+G +PVMV+S  CWL + +K+DC +D
Sbjct: 181  RVQVYVHQVSDKAKTGQDAGVHKRVVDDKESEIVLGRLPVMVRSDLCWLHSQDKNDCFFD 240

Query: 582  SGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLN 761
             GGYF++KG EK FIAQEQRC+TRLW+TD+P WTA   SE+K+RRVY+KLL+++K +G +
Sbjct: 241  PGGYFLIKGMEKTFIAQEQRCMTRLWITDKPCWTAQYMSEMKRRRVYIKLLESTKAEGNS 300

Query: 762  SGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYE 941
              K+IS+YFLYATMP+WIMFFALG +SDKEVF+M+DL+G  T + N+IL TIRDADE  E
Sbjct: 301  GVKMISLYFLYATMPIWIMFFALGVSSDKEVFEMMDLEGTSTDVVNMILVTIRDADEMCE 360

Query: 942  GFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGY 1121
            GFR   K+R++VN LIK AKFPP+ESFDEYI KYLFP I+G R+KA FLGY+ KCLLL Y
Sbjct: 361  GFRRGDKAREFVNKLIKDAKFPPTESFDEYIDKYLFPGITGLRQKALFLGYMAKCLLLSY 420

Query: 1122 SGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYW 1301
             GKRKCDNK+DFRNKRL+L G+LL+ EL +HIRHAE+RMVKAMQRDL+GD +LQ IERY 
Sbjct: 421  MGKRKCDNKDDFRNKRLELAGKLLSRELWSHIRHAERRMVKAMQRDLNGDDELQFIERYL 480

Query: 1302 DASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKA 1481
            D+SIITNGLNRAFSTG WCHP+++TER +G+VA L+RTN LQ+++DLR+TR  V YAGKA
Sbjct: 481  DSSIITNGLNRAFSTGQWCHPYKRTERTAGIVATLRRTNPLQLISDLRKTRQSVLYAGKA 540

Query: 1482 GDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQI 1661
            GDARYPNPSY+G+LCFLSTPDGENCGLVKNL++TALVS + +E I++KL+SCGM+KL+  
Sbjct: 541  GDARYPNPSYFGRLCFLSTPDGENCGLVKNLAITALVSLKKSESIIEKLISCGMDKLEGA 600

Query: 1662 SVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTD 1841
              +SLSK  KV LNG+WIGVC D++ FV  F+  RR+ QI  QVEIK D  Q+EVR+F+D
Sbjct: 601  PFSSLSKRIKVLLNGEWIGVCRDAELFVSKFKQRRRAGQIHPQVEIKRDEQQKEVRIFSD 660

Query: 1842 AGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQE 2021
            AGR+LRP                 +SFQSL++  +IE IGVEEEEDC TAWGI+YL +++
Sbjct: 661  AGRILRPLVIVENLKNVNKFKGGFTSFQSLMDAKIIELIGVEEEEDCRTAWGIKYLYKKD 720

Query: 2022 NGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 2195
              QP   YTHC+ D SF++ LSCGIIPFANHN+ARRVL+QA+KHS QAIGFSTTNP IRV
Sbjct: 721  EKQPIVNYTHCELDLSFLLALSCGIIPFANHNFARRVLYQAEKHSQQAIGFSTTNPDIRV 780

Query: 2196 DTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQE 2375
            DTL HQMYYPQ+PLF+T+ A+CLGR DY LG K    RPELFNGQNAIVAVNVHQGYNQE
Sbjct: 781  DTLTHQMYYPQKPLFRTLTAECLGRPDYCLG-KGHFVRPELFNGQNAIVAVNVHQGYNQE 839

Query: 2376 DSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLEDD 2555
            DSLVMN ASL+RG+FRTEHFRSYKA+VDNKE S R+K KDKV+F KMQSKKGRVDSLEDD
Sbjct: 840  DSLVMNEASLQRGLFRTEHFRSYKADVDNKENSVRLKPKDKVDFGKMQSKKGRVDSLEDD 899

Query: 2556 GFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQV 2735
            G P++GA L SGDIVIGKVAESG+DH  KLKHTEKGMVQKV+LS+NDEGKNFAVVTLRQV
Sbjct: 900  GLPYVGASLNSGDIVIGKVAESGEDHGVKLKHTEKGMVQKVLLSSNDEGKNFAVVTLRQV 959

Query: 2736 RSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAAL 2915
            RSP LGDKFSSMHGQKGV+G LE QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAAL
Sbjct: 960  RSPRLGDKFSSMHGQKGVIGLLEHQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEAAL 1019

Query: 2916 GKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPTF 3095
            GKGIACGG  TYATPF+TPSVD+I +QL    F RWGSE+V+NGRTGE M+SMIF+GPTF
Sbjct: 1020 GKGIACGGSATYATPFSTPSVDIIYDQLQRSGFCRWGSEKVINGRTGEFMQSMIFMGPTF 1079

Query: 3096 YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL 3275
            YQRLIHMAEDKVK+RNTGPVHPLTRQPVADRKR+GGVKFGEMERDCLLAHGAAANL+ER+
Sbjct: 1080 YQRLIHMAEDKVKYRNTGPVHPLTRQPVADRKRYGGVKFGEMERDCLLAHGAAANLYERM 1139

Query: 3276 FTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLLFQ 3452
            FTLSDFS MHIC+TC R ANVIQR +  G  +RGPYC FCKSAENIVRINVPYGAKLL+Q
Sbjct: 1140 FTLSDFSHMHICQTCKRAANVIQRPVLGGRKIRGPYCVFCKSAENIVRINVPYGAKLLYQ 1199

Query: 3453 ELFSMGICLKFETEV 3497
            ELFSMGICLKFETE+
Sbjct: 1200 ELFSMGICLKFETEL 1214


>gb|PAN40366.1| hypothetical protein PAHAL_G02501 [Panicum hallii]
 gb|PAN40368.1| hypothetical protein PAHAL_G02501 [Panicum hallii]
          Length = 1233

 Score = 1710 bits (4428), Expect = 0.0
 Identities = 817/1160 (70%), Positives = 979/1160 (84%), Gaps = 5/1160 (0%)
 Frame = +3

Query: 36   SDPKTNL----NVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVS 203
            SDP +N+    +VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV 
Sbjct: 78   SDPCSNVPIDVSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVI 137

Query: 204  VEPGYDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSS 383
            V+PGYDPSK   G W+HA IK+GRV+L+KP F + + + +   + L P+HARLQNMTY+S
Sbjct: 138  VDPGYDPSKKVSGSWKHAIIKFGRVKLEKPVFLSGKDEVD---IDLKPRHARLQNMTYAS 194

Query: 384  KLKVEVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEK 563
            K+KVEV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L + ++
Sbjct: 195  KIKVEVTIQVYSLEKSDKSKTGNDGFVQKRDFMNETHWIYIGRLPVMVKSDLCLLHSHKE 254

Query: 564  SDCLYDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDAS 743
            SDCL+D+GGYF+VKG EK FIAQEQRCL+RLW+ D+P WT S  SEIK+RR+Y+KL++++
Sbjct: 255  SDCLFDAGGYFLVKGMEKVFIAQEQRCLSRLWIADRPCWTVSFMSEIKRRRIYIKLVEST 314

Query: 744  KIDGLNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRD 923
            K +  +  K+IS+ FLYATMP+W+MFFALG +SDKE F +ID+  CD  + N I ATI++
Sbjct: 315  KSEDFSGSKIISISFLYATMPIWLMFFALGISSDKEAFDVIDMQDCDASVVNTISATIKE 374

Query: 924  ADEQYEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVK 1103
            +D   EGFR + K+R YV+ L+K+++FPP+ESFD+Y+ K+LFP ISG+R KA FLGY+VK
Sbjct: 375  SDGLCEGFRKSDKARQYVDKLVKNSRFPPAESFDDYVDKFLFPDISGYRNKALFLGYMVK 434

Query: 1104 CLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQ 1283
            CLL+ + GKRKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+RM+KA+QRDL+ DR+LQ
Sbjct: 435  CLLMAFIGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERRMIKAIQRDLNSDRELQ 494

Query: 1284 LIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQV 1463
             + RY DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +V
Sbjct: 495  DLARYLDASIVTNGLNRAFSTGSWCHPYKRNERCSGIVATLRRTNPLQMMSDLRKTRQRV 554

Query: 1464 AYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGM 1643
            AYAGKAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM
Sbjct: 555  AYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIESFISCGM 614

Query: 1644 EKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQRE 1823
             KL++I   S+ +MDK+FLNG+W+G C+DS SFV+  R MRRS  ID QVEIK D++Q+E
Sbjct: 615  SKLNEIPTESIQRMDKIFLNGNWVGSCTDSASFVLRLRCMRRSSLIDPQVEIKRDKHQKE 674

Query: 1824 VRVFTDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIR 2003
            VRVF+DAGRLLRP                  SFQ L+ + +IEFIGVEEEED   AWGIR
Sbjct: 675  VRVFSDAGRLLRPLLVVENLNKIRKPKGRQYSFQELMQQEIIEFIGVEEEEDIQCAWGIR 734

Query: 2004 YLLQQENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNP 2183
            +L   E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP
Sbjct: 735  HLFGSEGEISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNP 794

Query: 2184 GIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQG 2363
             IRVDTL HQ+YYPQRPLFKTVIADCLGR DY++G +D  SRPE FNGQNAIVAVNVHQG
Sbjct: 795  HIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTIGRRDDFSRPEYFNGQNAIVAVNVHQG 854

Query: 2364 YNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDS 2543
            +NQEDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K K+K++FAKM+SK+G VD+
Sbjct: 855  FNQEDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLK-KEKIDFAKMESKRGCVDN 913

Query: 2544 LEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVT 2723
            L+DDG P+IGA LQ+ DI+IGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVT
Sbjct: 914  LDDDGLPYIGASLQTNDIIIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVT 973

Query: 2724 LRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLL 2903
            LRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLL
Sbjct: 974  LRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLL 1033

Query: 2904 EAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFI 3083
            EAALGKGIA GG + YATPFTT SVDVI EQLH   F +WG+E V+NGRTGE M+S++F+
Sbjct: 1034 EAALGKGIALGGTMRYATPFTTASVDVIAEQLHKFGFSKWGAESVINGRTGERMQSLVFM 1093

Query: 3084 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL 3263
            GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL
Sbjct: 1094 GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL 1153

Query: 3264 HERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAK 3440
            HERLF LSDFSQMHIC+TC R ANVI R +  G  +RGPYCGFCKS+ENIVRINVPYGAK
Sbjct: 1154 HERLFMLSDFSQMHICQTCERVANVIMRCVPGGKKIRGPYCGFCKSSENIVRINVPYGAK 1213

Query: 3441 LLFQELFSMGICLKFETEVC 3500
            LL+QELFSMGICLKFETEVC
Sbjct: 1214 LLYQELFSMGICLKFETEVC 1233


>ref|XP_020593256.1| DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
            [Phalaenopsis equestris]
          Length = 1216

 Score = 1704 bits (4414), Expect = 0.0
 Identities = 820/1157 (70%), Positives = 983/1157 (84%), Gaps = 4/1157 (0%)
 Frame = +3

Query: 39   DPKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGY 218
            D + ++++E LEKF K AS+AFFNE+GL+ HQINS+N+F+ +GLQELFDSLG V+VEP Y
Sbjct: 62   DEQLDMSLEMLEKFFKGASRAFFNEYGLVSHQINSYNEFIKNGLQELFDSLGAVAVEPDY 121

Query: 219  DPSKG-GGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 395
            +P      G W+HA++ +G+VRL+KP FW E++D +++ LKL PKHARLQNMTYS+++KV
Sbjct: 122  NPQDAKNDGSWKHATVTFGKVRLEKPVFWVEKNDLDEQELKLTPKHARLQNMTYSAQMKV 181

Query: 396  EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            +V+VQV++   SDKAKTG+D  + K ++ +++ EIV+G +PVMV+S  CWL + +K+DC 
Sbjct: 182  KVRVQVYVHRVSDKAKTGQDAGVHKMLVDDKESEIVLGRLPVMVRSDLCWLPSQDKNDCF 241

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +D GGYF++KG EK FIAQEQRCLTRLW+TD+P WT    SEIK+RRVY+KLL+++K +G
Sbjct: 242  FDPGGYFLIKGMEKTFIAQEQRCLTRLWITDKPCWTVQYMSEIKRRRVYIKLLESTKAEG 301

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             +  K+IS+YFLYATMP+WIMFFALG +SDKEVF+MIDLDG  T + N+ILATIRDAD  
Sbjct: 302  NSGVKMISLYFLYATMPIWIMFFALGVSSDKEVFEMIDLDGTSTDVVNMILATIRDADGM 361

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
             EGFR  GK+RD+VN LIK AKFPP+ESFDEYI+K+LFP I+G R+KA FLGY++KCLLL
Sbjct: 362  CEGFRRGGKARDFVNKLIKDAKFPPTESFDEYINKFLFPGITGLRQKALFLGYMIKCLLL 421

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             Y GKRKCDNK+DFRNKRL+L G+LL+ EL +HIRHAE+RMVKAMQRDL+GD +LQ  ER
Sbjct: 422  SYMGKRKCDNKDDFRNKRLELAGKLLSRELWSHIRHAERRMVKAMQRDLNGD-ELQFTER 480

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            Y D+SIITNGLNRAFSTG WCHP+++TER +G+VA L+RTN LQ+++DLR+TR  V YAG
Sbjct: 481  YLDSSIITNGLNRAFSTGQWCHPYKRTERTAGIVATLRRTNPLQLISDLRKTRQSVLYAG 540

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSY+G+LCFLSTPDGENCGLVKNL++TALVSS+ +E IL+ L+SCGM+KL+
Sbjct: 541  KAGDARYPNPSYFGRLCFLSTPDGENCGLVKNLAITALVSSKLSETILEVLISCGMDKLE 600

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
               ++SLSK  KV LNG+WIGVC D++SFV  F+  RR  QI  QVEIK D +Q+EVR+F
Sbjct: 601  GAPLSSLSKRVKVLLNGEWIGVCRDAESFVSKFKRSRRGGQIHPQVEIKRDDHQKEVRIF 660

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            TDAGR+LRP                 +SFQSL++  +IE IGVEEEEDC TAWG++YL +
Sbjct: 661  TDAGRILRPLVIVENLKNVNKYKGGFASFQSLMDAKIIELIGVEEEEDCRTAWGVKYLFK 720

Query: 2016 QENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGI 2189
            +++ QP   YTHC+ D SF++ LSCGIIPFANHN+ARRVL+QA+KHS QAIGFSTTNP I
Sbjct: 721  KDDKQPIVNYTHCELDLSFLLALSCGIIPFANHNFARRVLYQAEKHSQQAIGFSTTNPDI 780

Query: 2190 RVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYN 2369
            RVDTL HQMYYPQ+PLF+T+ A+CLG  DY  G K  + RPELFNGQNAIVAVNVH GYN
Sbjct: 781  RVDTLTHQMYYPQKPLFRTMTAECLGMSDYRFG-KGHIVRPELFNGQNAIVAVNVHLGYN 839

Query: 2370 QEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLE 2549
            QEDSLVMN AS++RG+FRTEHFRSYKA+VDNKE S R+K KDKV+F KMQSK+GRVDSLE
Sbjct: 840  QEDSLVMNEASVQRGLFRTEHFRSYKADVDNKENSLRLKPKDKVDFGKMQSKRGRVDSLE 899

Query: 2550 DDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLR 2729
            DDG P++GA L SGDIV+GKVAESG+DH  KLKHTEKG+VQKV+LS+NDEGKNFAVVTLR
Sbjct: 900  DDGLPYVGAYLNSGDIVVGKVAESGEDHGVKLKHTEKGVVQKVLLSSNDEGKNFAVVTLR 959

Query: 2730 QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEA 2909
            QVRSP LGDKFSSMHGQKGV+G LE QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA
Sbjct: 960  QVRSPRLGDKFSSMHGQKGVIGLLEHQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEA 1019

Query: 2910 ALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGP 3089
            ALGKGIACGG  TYATPF+TPSVDVI +QL    F RWGSE+V+NGRTGE+M+SMIF+GP
Sbjct: 1020 ALGKGIACGGSTTYATPFSTPSVDVIYDQLQRSGFCRWGSEKVINGRTGELMQSMIFMGP 1079

Query: 3090 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 3269
            TFYQRLIHMAEDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL+E
Sbjct: 1080 TFYQRLIHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLYE 1139

Query: 3270 RLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLL 3446
            R+FTLSDFSQMHIC+ C R ANVIQR +  G  +RGPYC FCKSAENIVRINVPYGAKLL
Sbjct: 1140 RMFTLSDFSQMHICQICKRAANVIQRPVLGGRKIRGPYCVFCKSAENIVRINVPYGAKLL 1199

Query: 3447 FQELFSMGICLKFETEV 3497
            +QELFSMGICLKFETEV
Sbjct: 1200 YQELFSMGICLKFETEV 1216


>ref|XP_020593257.1| DNA-directed RNA polymerases IV and V subunit 2-like isoform X2
            [Phalaenopsis equestris]
          Length = 1198

 Score = 1704 bits (4414), Expect = 0.0
 Identities = 820/1157 (70%), Positives = 983/1157 (84%), Gaps = 4/1157 (0%)
 Frame = +3

Query: 39   DPKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGY 218
            D + ++++E LEKF K AS+AFFNE+GL+ HQINS+N+F+ +GLQELFDSLG V+VEP Y
Sbjct: 44   DEQLDMSLEMLEKFFKGASRAFFNEYGLVSHQINSYNEFIKNGLQELFDSLGAVAVEPDY 103

Query: 219  DPSKG-GGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 395
            +P      G W+HA++ +G+VRL+KP FW E++D +++ LKL PKHARLQNMTYS+++KV
Sbjct: 104  NPQDAKNDGSWKHATVTFGKVRLEKPVFWVEKNDLDEQELKLTPKHARLQNMTYSAQMKV 163

Query: 396  EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            +V+VQV++   SDKAKTG+D  + K ++ +++ EIV+G +PVMV+S  CWL + +K+DC 
Sbjct: 164  KVRVQVYVHRVSDKAKTGQDAGVHKMLVDDKESEIVLGRLPVMVRSDLCWLPSQDKNDCF 223

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +D GGYF++KG EK FIAQEQRCLTRLW+TD+P WT    SEIK+RRVY+KLL+++K +G
Sbjct: 224  FDPGGYFLIKGMEKTFIAQEQRCLTRLWITDKPCWTVQYMSEIKRRRVYIKLLESTKAEG 283

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             +  K+IS+YFLYATMP+WIMFFALG +SDKEVF+MIDLDG  T + N+ILATIRDAD  
Sbjct: 284  NSGVKMISLYFLYATMPIWIMFFALGVSSDKEVFEMIDLDGTSTDVVNMILATIRDADGM 343

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
             EGFR  GK+RD+VN LIK AKFPP+ESFDEYI+K+LFP I+G R+KA FLGY++KCLLL
Sbjct: 344  CEGFRRGGKARDFVNKLIKDAKFPPTESFDEYINKFLFPGITGLRQKALFLGYMIKCLLL 403

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             Y GKRKCDNK+DFRNKRL+L G+LL+ EL +HIRHAE+RMVKAMQRDL+GD +LQ  ER
Sbjct: 404  SYMGKRKCDNKDDFRNKRLELAGKLLSRELWSHIRHAERRMVKAMQRDLNGD-ELQFTER 462

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            Y D+SIITNGLNRAFSTG WCHP+++TER +G+VA L+RTN LQ+++DLR+TR  V YAG
Sbjct: 463  YLDSSIITNGLNRAFSTGQWCHPYKRTERTAGIVATLRRTNPLQLISDLRKTRQSVLYAG 522

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSY+G+LCFLSTPDGENCGLVKNL++TALVSS+ +E IL+ L+SCGM+KL+
Sbjct: 523  KAGDARYPNPSYFGRLCFLSTPDGENCGLVKNLAITALVSSKLSETILEVLISCGMDKLE 582

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
               ++SLSK  KV LNG+WIGVC D++SFV  F+  RR  QI  QVEIK D +Q+EVR+F
Sbjct: 583  GAPLSSLSKRVKVLLNGEWIGVCRDAESFVSKFKRSRRGGQIHPQVEIKRDDHQKEVRIF 642

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            TDAGR+LRP                 +SFQSL++  +IE IGVEEEEDC TAWG++YL +
Sbjct: 643  TDAGRILRPLVIVENLKNVNKYKGGFASFQSLMDAKIIELIGVEEEEDCRTAWGVKYLFK 702

Query: 2016 QENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGI 2189
            +++ QP   YTHC+ D SF++ LSCGIIPFANHN+ARRVL+QA+KHS QAIGFSTTNP I
Sbjct: 703  KDDKQPIVNYTHCELDLSFLLALSCGIIPFANHNFARRVLYQAEKHSQQAIGFSTTNPDI 762

Query: 2190 RVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYN 2369
            RVDTL HQMYYPQ+PLF+T+ A+CLG  DY  G K  + RPELFNGQNAIVAVNVH GYN
Sbjct: 763  RVDTLTHQMYYPQKPLFRTMTAECLGMSDYRFG-KGHIVRPELFNGQNAIVAVNVHLGYN 821

Query: 2370 QEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLE 2549
            QEDSLVMN AS++RG+FRTEHFRSYKA+VDNKE S R+K KDKV+F KMQSK+GRVDSLE
Sbjct: 822  QEDSLVMNEASVQRGLFRTEHFRSYKADVDNKENSLRLKPKDKVDFGKMQSKRGRVDSLE 881

Query: 2550 DDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLR 2729
            DDG P++GA L SGDIV+GKVAESG+DH  KLKHTEKG+VQKV+LS+NDEGKNFAVVTLR
Sbjct: 882  DDGLPYVGAYLNSGDIVVGKVAESGEDHGVKLKHTEKGVVQKVLLSSNDEGKNFAVVTLR 941

Query: 2730 QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEA 2909
            QVRSP LGDKFSSMHGQKGV+G LE QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA
Sbjct: 942  QVRSPRLGDKFSSMHGQKGVIGLLEHQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEA 1001

Query: 2910 ALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGP 3089
            ALGKGIACGG  TYATPF+TPSVDVI +QL    F RWGSE+V+NGRTGE+M+SMIF+GP
Sbjct: 1002 ALGKGIACGGSTTYATPFSTPSVDVIYDQLQRSGFCRWGSEKVINGRTGELMQSMIFMGP 1061

Query: 3090 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 3269
            TFYQRLIHMAEDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL+E
Sbjct: 1062 TFYQRLIHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLYE 1121

Query: 3270 RLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLL 3446
            R+FTLSDFSQMHIC+ C R ANVIQR +  G  +RGPYC FCKSAENIVRINVPYGAKLL
Sbjct: 1122 RMFTLSDFSQMHICQICKRAANVIQRPVLGGRKIRGPYCVFCKSAENIVRINVPYGAKLL 1181

Query: 3447 FQELFSMGICLKFETEV 3497
            +QELFSMGICLKFETEV
Sbjct: 1182 YQELFSMGICLKFETEV 1198


>gb|AQK46524.1| DNA-directed RNA polymerases IV and V subunit 2 [Zea mays]
 gb|AQK46537.1| DNA-directed RNA polymerases IV and V subunit 2 [Zea mays]
          Length = 1229

 Score = 1701 bits (4405), Expect = 0.0
 Identities = 809/1157 (69%), Positives = 975/1157 (84%), Gaps = 2/1157 (0%)
 Frame = +3

Query: 36   SDPKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 215
            S+P  N++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 76   SNPPINMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 135

Query: 216  YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 395
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+L+V
Sbjct: 136  YDPSKKGSGSWKHAIIKFGRVKLEKPVFWTGK---DEVSVDFKPWHARLQNMTYASRLRV 192

Query: 396  EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L++S+CL
Sbjct: 193  EVTIQVYSLEKSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECL 252

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +D+GGYF+VKG EK FIAQE RCL RLW++D+P WT S  SE+K+RR+Y+KL+++++ + 
Sbjct: 253  FDAGGYFLVKGMEKVFIAQELRCLRRLWISDRPCWTISFMSEMKRRRIYIKLVESTRSED 312

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             +  K+IS+ FLYATMPVW++FFALG +SDKE F +ID+  CD  + N I ATI+++DE 
Sbjct: 313  FSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDEL 372

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
              GFR + K+R YV+ L+KS+KFPP ESFD+YI+K+LFP ISG+R KA FLGY+VKCLL+
Sbjct: 373  CGGFRKSDKARQYVDELVKSSKFPPVESFDDYIAKFLFPGISGNRNKALFLGYMVKCLLM 432

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             ++GKRKCDNK+DFRNKRLDL GELL  ELRAH+R AE+RMVKA+QRDL+ DR+LQ +ER
Sbjct: 433  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRQAERRMVKAIQRDLNSDRELQDLER 492

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 493  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 552

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VT++VSS+  +P+++  +SCGM KL+
Sbjct: 553  KAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTSIVSSKVVQPLIESFISCGMNKLN 612

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
             I    + +MDK+FLNG+W+G CSDS SFV   R MRRS  ID QVEIK D++ +EVR+F
Sbjct: 613  DIPTEHIQRMDKIFLNGNWLGSCSDSASFVFRLRCMRRSSLIDPQVEIKRDKHYKEVRLF 672

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            +DAGR+LRP                  SFQ L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 673  SDAGRILRPLLVVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 732

Query: 2016 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 2195
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+ST+NP IRV
Sbjct: 733  SEGAISSYTHCELDPSFILGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTSNPRIRV 792

Query: 2196 DTLMHQMYYPQRPLFKTVIADCLGRRD-YSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 2372
            DTL HQ+YYPQRPLFKTVIADCLGR D  + G KD  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 793  DTLSHQLYYPQRPLFKTVIADCLGRSDCTTFGRKDDFTRPEYFNGQNAIVAVNVHQGFNQ 852

Query: 2373 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 2552
            EDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 853  EDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 912

Query: 2553 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 2732
            DG P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 913  DGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 972

Query: 2733 VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 2912
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 973  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHDGIVPDIVINPHAFPTRQTPGQLLEAA 1032

Query: 2913 LGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 3092
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWG+E VLNGRTGE M+S++F+GPT
Sbjct: 1033 LGKGIACKGTMRYATPFTTASVDVIAEQLHKAGYSRWGAENVLNGRTGERMKSLVFMGPT 1092

Query: 3093 FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 3272
            FYQRLIHM+EDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1093 FYQRLIHMSEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1152

Query: 3273 LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLLF 3449
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVRINVPYGAKLL+
Sbjct: 1153 LFMLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1212

Query: 3450 QELFSMGICLKFETEVC 3500
            QELFSMGICLKFETEVC
Sbjct: 1213 QELFSMGICLKFETEVC 1229


>ref|XP_002468227.1| DNA-directed RNA polymerases IV and V subunit 2 [Sorghum bicolor]
 gb|EER95225.1| hypothetical protein SORBI_3001G448100 [Sorghum bicolor]
          Length = 1228

 Score = 1701 bits (4405), Expect = 0.0
 Identities = 815/1163 (70%), Positives = 975/1163 (83%), Gaps = 6/1163 (0%)
 Frame = +3

Query: 30   KGSDPKTN----LNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGE 197
            K S+P +N    L+VE+LEKFCK AS++FF+E GLI HQINS+N FV+ GLQELFDSLGE
Sbjct: 69   KSSEPYSNAPIDLSVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQELFDSLGE 128

Query: 198  VSVEPGYDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTY 377
            V VEPGYDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY
Sbjct: 129  VIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTY 185

Query: 378  SSKLKVEVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTL 557
            +S+L VEV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L
Sbjct: 186  ASRLIVEVNIQVYSLEKSDKSKTGNDGFVQKRDFMNETHWIFIGLLPVMVKSNLCLLHSL 245

Query: 558  EKSDCLYDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLD 737
            ++S+CL+D+GGYF+VKG EK FIAQE RCL RLW+ D+P W  S  SE+K+RR+Y+KL++
Sbjct: 246  KESECLFDAGGYFLVKGMEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRRRIYIKLVE 305

Query: 738  ASKIDGLNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATI 917
            +++ +  +  K+IS+ FLYATMPVW++FFALG +SDKE F +ID+  CD  + N I ATI
Sbjct: 306  STRSEDFSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATI 365

Query: 918  RDADEQYEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYI 1097
            +++DE  EGFR + K+R YV+ L+KS++FPP+ESFD+YI+++LFP ISG+R KA FLGY+
Sbjct: 366  KESDELCEGFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYM 425

Query: 1098 VKCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRD 1277
            VKCLL+ ++GKRKCDNK+DFRNKRLDL GELL  ELRAH+R AEKRMVKA+QRDL+ DR+
Sbjct: 426  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRDLNSDRE 485

Query: 1278 LQLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRL 1457
            LQ +ERY DASI+TNGL+RAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR 
Sbjct: 486  LQDLERYIDASIVTNGLSRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 545

Query: 1458 QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSC 1637
            +VAYAGKAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SC
Sbjct: 546  RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIESFISC 605

Query: 1638 GMEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQ 1817
            GM KL+ I    + +MDK+FLNG+W+G C DS SFV   R MRRS  ID QVEIK D++ 
Sbjct: 606  GMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSLIDPQVEIKRDKHH 665

Query: 1818 REVRVFTDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWG 1997
            +EVRVF+DAGR+LRP                  SFQ L+ + +IEFIGVEEEED   AWG
Sbjct: 666  KEVRVFSDAGRILRPLLVVENLKKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWG 725

Query: 1998 IRYLLQQENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTT 2177
            IR+L + E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STT
Sbjct: 726  IRHLFESEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTT 785

Query: 2178 NPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNV 2354
            NP IRVDTL HQ+YYPQRPLFKTVIADCLGR DY + G KD   RPE FNGQNAIVAVNV
Sbjct: 786  NPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTTFGRKDDFMRPEYFNGQNAIVAVNV 845

Query: 2355 HQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGR 2534
            HQG+NQEDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GR
Sbjct: 846  HQGFNQEDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGR 905

Query: 2535 VDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFA 2714
            VD+L+DDG P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFA
Sbjct: 906  VDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFA 965

Query: 2715 VVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPG 2894
            VVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPG
Sbjct: 966  VVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHKGIVPDIVINPHAFPTRQTPG 1025

Query: 2895 QLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSM 3074
            QLLEAALGKGIAC G + YATPFTT SVDVI EQLH   + RWG+E VLNGRTGE M+S+
Sbjct: 1026 QLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGTENVLNGRTGERMQSL 1085

Query: 3075 IFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAA 3254
            IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+A
Sbjct: 1086 IFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSA 1145

Query: 3255 ANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPY 3431
            ANLHERLF LSDFSQMHIC+TC R ANV+ R++S G  +RGPYCGFCKS+ENIVRINVPY
Sbjct: 1146 ANLHERLFMLSDFSQMHICQTCERVANVVMRSVSGGKKIRGPYCGFCKSSENIVRINVPY 1205

Query: 3432 GAKLLFQELFSMGICLKFETEVC 3500
            GAKLL+QELFSMGICLKF+TEVC
Sbjct: 1206 GAKLLYQELFSMGICLKFDTEVC 1228


>ref|XP_015636222.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Oryza
            sativa Japonica Group]
 dbj|BAS91258.1| Os04g0641000 [Oryza sativa Japonica Group]
          Length = 1252

 Score = 1699 bits (4399), Expect = 0.0
 Identities = 816/1176 (69%), Positives = 971/1176 (82%), Gaps = 26/1176 (2%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            ++++ +LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV+VEP YDPS 
Sbjct: 77   DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSN 136

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
             G G WRHA IK+GRV+L++P FW+   D +++ LKL P+HARLQNMTYSSK+KVEV  Q
Sbjct: 137  RGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQ 196

Query: 411  VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 590
            V+  EKSDKAKTG D +  KR +  E   I IG +PVMV S  CWL  L++SDC +DSGG
Sbjct: 197  VYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 256

Query: 591  YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 770
            YF++KG EK FIAQEQ+CLTR+W+ D+P W  S  S I++RR+Y+KL+D++  +  + GK
Sbjct: 257  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 316

Query: 771  LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 950
            +IS+ FLYA MP+W+MFFALG +SDK++F +I+++ CD  + N I ATI+++DE  EGFR
Sbjct: 317  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 376

Query: 951  AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 1130
             + K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 377  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 436

Query: 1131 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 1310
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ +R+LQ  + Y DAS
Sbjct: 437  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 496

Query: 1311 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 1490
            IITNGLNRAFSTG WCHP+++ ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 497  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 556

Query: 1491 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1670
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA VSSR   P++D+ +SCGM KL +I   
Sbjct: 557  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTE 616

Query: 1671 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1850
             + +MDK+FLNGDW+G CSD  SFV+  R MRRS  ID QVEIK D++QREVRVF+DAGR
Sbjct: 617  EVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGR 676

Query: 1851 LLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENGQ 2030
            +LRP                  SFQ L+ + +IEFIGVEEEED  +AWGIR L + E   
Sbjct: 677  ILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEA 736

Query: 2031 P----------------------AYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQK 2144
            P                       YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++K
Sbjct: 737  PMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEK 796

Query: 2145 HSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFN 2324
            HS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTVIADC+GR +Y+ G KD  +RPE FN
Sbjct: 797  HSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFN 856

Query: 2325 GQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNK---EMSKRIKIKD 2495
            GQNAIVAVNVHQG+NQEDSLVMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+KD
Sbjct: 857  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKD 916

Query: 2496 KVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQK 2675
            K++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ+
Sbjct: 917  KIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQR 976

Query: 2676 VVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIV 2855
            V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIV
Sbjct: 977  VLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIV 1036

Query: 2856 INPHAFPTRQTPGQLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSER 3035
            INPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E 
Sbjct: 1037 INPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAES 1096

Query: 3036 VLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 3215
            VLNGRTGE M S+IF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
Sbjct: 1097 VLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 1156

Query: 3216 EMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFC 3392
            EMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC R ANVI R +  G  +RGPYCGFC
Sbjct: 1157 EMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFC 1216

Query: 3393 KSAENIVRINVPYGAKLLFQELFSMGICLKFETEVC 3500
            +S+ENIVRINVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1217 RSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1252


>dbj|BAF15955.1| Os04g0641000, partial [Oryza sativa Japonica Group]
          Length = 1270

 Score = 1697 bits (4396), Expect = 0.0
 Identities = 815/1176 (69%), Positives = 971/1176 (82%), Gaps = 26/1176 (2%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            ++++ +LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV+VEP YDPS 
Sbjct: 95   DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSN 154

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
             G G WRHA IK+GRV+L++P FW+   D +++ LKL P+HARLQNMTYSSK+KVEV  Q
Sbjct: 155  RGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQ 214

Query: 411  VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 590
            V+  EKSDKAKTG D +  KR +  E   I IG +PVMV S  CWL  L++SDC +DSGG
Sbjct: 215  VYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 274

Query: 591  YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 770
            YF++KG EK FIAQEQ+CLTR+W+ D+P W  S  S I++RR+Y+KL+D++  +  + GK
Sbjct: 275  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 334

Query: 771  LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 950
            +IS+ FLYA MP+W+MFFALG +SDK++F +I+++ CD  + N I ATI+++DE  EGFR
Sbjct: 335  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 394

Query: 951  AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 1130
             + K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 395  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 454

Query: 1131 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 1310
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ +R+LQ  + Y DAS
Sbjct: 455  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 514

Query: 1311 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 1490
            IITNGLNRAFSTG WCHP+++ ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 515  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 574

Query: 1491 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1670
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA VSSR   P++D+ +SCGM KL +I   
Sbjct: 575  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTE 634

Query: 1671 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1850
             + +MDK+FLNGDW+G CSD  SFV+  R MRRS  ID QVEIK D++QREVRVF+DAGR
Sbjct: 635  EVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGR 694

Query: 1851 LLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENGQ 2030
            +LRP                  SFQ L+ + +IEFIGVEEEED  +AWGIR L + E   
Sbjct: 695  ILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEA 754

Query: 2031 P----------------------AYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQK 2144
            P                       YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++K
Sbjct: 755  PMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEK 814

Query: 2145 HSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFN 2324
            HS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTVIADC+GR +Y+ G KD  +RPE FN
Sbjct: 815  HSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFN 874

Query: 2325 GQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNK---EMSKRIKIKD 2495
            GQNAIVAVNVHQG+NQEDS+VMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+KD
Sbjct: 875  GQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKD 934

Query: 2496 KVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQK 2675
            K++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ+
Sbjct: 935  KIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQR 994

Query: 2676 VVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIV 2855
            V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIV
Sbjct: 995  VLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIV 1054

Query: 2856 INPHAFPTRQTPGQLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSER 3035
            INPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E 
Sbjct: 1055 INPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAES 1114

Query: 3036 VLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 3215
            VLNGRTGE M S+IF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
Sbjct: 1115 VLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 1174

Query: 3216 EMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFC 3392
            EMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC R ANVI R +  G  +RGPYCGFC
Sbjct: 1175 EMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFC 1234

Query: 3393 KSAENIVRINVPYGAKLLFQELFSMGICLKFETEVC 3500
            +S+ENIVRINVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1235 RSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1270


>emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]
          Length = 1316

 Score = 1697 bits (4396), Expect = 0.0
 Identities = 815/1176 (69%), Positives = 971/1176 (82%), Gaps = 26/1176 (2%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            ++++ +LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV+VEP YDPS 
Sbjct: 141  DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSN 200

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
             G G WRHA IK+GRV+L++P FW+   D +++ LKL P+HARLQNMTYSSK+KVEV  Q
Sbjct: 201  RGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQ 260

Query: 411  VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 590
            V+  EKSDKAKTG D +  KR +  E   I IG +PVMV S  CWL  L++SDC +DSGG
Sbjct: 261  VYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 320

Query: 591  YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 770
            YF++KG EK FIAQEQ+CLTR+W+ D+P W  S  S I++RR+Y+KL+D++  +  + GK
Sbjct: 321  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 380

Query: 771  LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 950
            +IS+ FLYA MP+W+MFFALG +SDK++F +I+++ CD  + N I ATI+++DE  EGFR
Sbjct: 381  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 440

Query: 951  AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 1130
             + K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 441  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 500

Query: 1131 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 1310
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ +R+LQ  + Y DAS
Sbjct: 501  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 560

Query: 1311 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 1490
            IITNGLNRAFSTG WCHP+++ ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 561  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 620

Query: 1491 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1670
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA VSSR   P++D+ +SCGM KL +I   
Sbjct: 621  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTE 680

Query: 1671 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1850
             + +MDK+FLNGDW+G CSD  SFV+  R MRRS  ID QVEIK D++QREVRVF+DAGR
Sbjct: 681  EVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGR 740

Query: 1851 LLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENGQ 2030
            +LRP                  SFQ L+ + +IEFIGVEEEED  +AWGIR L + E   
Sbjct: 741  ILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEA 800

Query: 2031 P----------------------AYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQK 2144
            P                       YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++K
Sbjct: 801  PMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEK 860

Query: 2145 HSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFN 2324
            HS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTVIADC+GR +Y+ G KD  +RPE FN
Sbjct: 861  HSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFN 920

Query: 2325 GQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNK---EMSKRIKIKD 2495
            GQNAIVAVNVHQG+NQEDS+VMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+KD
Sbjct: 921  GQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKD 980

Query: 2496 KVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQK 2675
            K++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ+
Sbjct: 981  KIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQR 1040

Query: 2676 VVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIV 2855
            V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIV
Sbjct: 1041 VLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIV 1100

Query: 2856 INPHAFPTRQTPGQLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSER 3035
            INPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E 
Sbjct: 1101 INPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAES 1160

Query: 3036 VLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 3215
            VLNGRTGE M S+IF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
Sbjct: 1161 VLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 1220

Query: 3216 EMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFC 3392
            EMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC R ANVI R +  G  +RGPYCGFC
Sbjct: 1221 EMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFC 1280

Query: 3393 KSAENIVRINVPYGAKLLFQELFSMGICLKFETEVC 3500
            +S+ENIVRINVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1281 RSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1316


>ref|NP_001338873.1| required to maintain repression 7 [Zea mays]
 gb|ADB19857.1| required to maintain repression 7/RNA polymerase D second largest
            subunit [Zea mays]
 gb|ADI24118.1| RPD2/E2a [Zea mays]
 gb|ONM13141.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13145.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13149.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13152.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13153.1| nuclear RNA polymerase D2/E2 [Zea mays]
          Length = 1229

 Score = 1696 bits (4392), Expect = 0.0
 Identities = 809/1157 (69%), Positives = 972/1157 (84%), Gaps = 2/1157 (0%)
 Frame = +3

Query: 36   SDPKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 215
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 76   SNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 135

Query: 216  YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 395
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+L V
Sbjct: 136  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTYASRLIV 192

Query: 396  EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L +S+CL
Sbjct: 193  EVTIQVYSLEKSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNESECL 252

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +D+GGYF+VKG EK FIAQEQRCL RLW++D+P WT S  SEIK+RR+Y+KL+++++ + 
Sbjct: 253  FDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVESTRSED 312

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             +  K+I++ FLYATMPVW++FFALG +SDKEVF MID+  CD  + N I ATI+++D+ 
Sbjct: 313  FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIKESDKL 372

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
             E FR + K+R YV+ L+KS++FPP+ESFD+YI+++LFP ISG+R KA FLGY+VKCLL+
Sbjct: 373  CEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLM 432

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             ++GKRKCDNK+DFRNKRLDL GELL  ELRA +R AEKRMVKA+QRDL+ DR+LQ +ER
Sbjct: 433  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLER 492

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 493  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 552

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 553  KAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCGMSKLN 612

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
             I    + +MDK+FLNG+W+G C +S SFV   R MRRS  ID QVEIK D++  EVRVF
Sbjct: 613  DIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVF 672

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            TDAGR+LRP                  SF  L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 673  TDAGRILRPLLVVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 732

Query: 2016 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 2195
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 733  SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 792

Query: 2196 DTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 2372
            DTL HQ+YYPQRPLFKTVIADCLGR DY S G K+  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 793  DTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQ 852

Query: 2373 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 2552
            EDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 853  EDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 912

Query: 2553 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 2732
            DG P++GA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 913  DGLPYVGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 972

Query: 2733 VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 2912
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 973  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAA 1032

Query: 2913 LGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 3092
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWGSE VLNGRTGE ++S++F+GPT
Sbjct: 1033 LGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGSENVLNGRTGERVQSLVFMGPT 1092

Query: 3093 FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 3272
            FYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1093 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1152

Query: 3273 LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLLF 3449
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVRINVPYGAKLL+
Sbjct: 1153 LFLLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1212

Query: 3450 QELFSMGICLKFETEVC 3500
            QELFSMGICLKFET+VC
Sbjct: 1213 QELFSMGICLKFETQVC 1229


>ref|XP_002447199.1| DNA-directed RNA polymerases IV and V subunit 2 [Sorghum bicolor]
 gb|EES11527.1| hypothetical protein SORBI_3006G236000 [Sorghum bicolor]
 gb|KXG27149.2| hypothetical protein SORBI_3006G236000 [Sorghum bicolor]
          Length = 1239

 Score = 1696 bits (4392), Expect = 0.0
 Identities = 806/1157 (69%), Positives = 972/1157 (84%), Gaps = 2/1157 (0%)
 Frame = +3

Query: 36   SDPKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 215
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 86   SNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 145

Query: 216  YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 395
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+LKV
Sbjct: 146  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTYASRLKV 202

Query: 396  EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            EV +QV+  EKSDK+KTG + ++ KR    E   I IG +PVMVKS  C L +L++S+CL
Sbjct: 203  EVTIQVYSLEKSDKSKTGNEGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECL 262

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +D+GGYF+VKG EK FIAQEQRCL RLW++D+P W  S   EIK+RR+Y+KL+++++ + 
Sbjct: 263  FDAGGYFLVKGMEKVFIAQEQRCLKRLWVSDRPFWMISFMHEIKRRRIYIKLVESTRSED 322

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             +  K+IS+ FLYATMPVW++FFALG +SDKE F +ID+  CD  + N I ATI+++DE 
Sbjct: 323  FSGSKVISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDEL 382

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
             +GFR + K+R YV+ L+KS++FPP+ESFD+Y++++LFP I+G+R KA FLGY+VKCLL+
Sbjct: 383  CKGFRKSDKARQYVDELVKSSRFPPAESFDDYVARFLFPDINGNRNKAFFLGYMVKCLLM 442

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             ++GKRKCDNK+DFRNKRLDL GELL  ELRA +R  E+RMVKA+QRDL+ DR+LQ +ER
Sbjct: 443  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLLERRMVKAIQRDLNNDRELQDLER 502

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 503  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 562

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 563  KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRVGQPLIESFISCGMSKLN 622

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
             I    + +MDK+FLNG+W+G C DS SFV   R MRRS  ID QVEIK D++ +EVRVF
Sbjct: 623  DIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSMIDPQVEIKRDKHHKEVRVF 682

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            +DAGR+LRP                  SFQ L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 683  SDAGRILRPLLVVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 742

Query: 2016 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 2195
             E    +YTHC+ DPSF+MGLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 743  SEGAISSYTHCELDPSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 802

Query: 2196 DTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 2372
            DTL HQ+YYPQRPLFKTVIADCLGR DY + G KD  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 803  DTLSHQLYYPQRPLFKTVIADCLGRSDYTAFGRKDDYTRPEYFNGQNAIVAVNVHQGFNQ 862

Query: 2373 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 2552
            EDSLVMNRASLERGMFRTEH RSYK +V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 863  EDSLVMNRASLERGMFRTEHLRSYKTDVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 922

Query: 2553 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 2732
            DG P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 923  DGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 982

Query: 2733 VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 2912
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 983  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAA 1042

Query: 2913 LGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 3092
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWG+E VLNGRTGE M+S++F+GPT
Sbjct: 1043 LGKGIACKGTMRYATPFTTASVDVIAEQLHKAGYSRWGAENVLNGRTGERMQSLVFMGPT 1102

Query: 3093 FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 3272
            FYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1103 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1162

Query: 3273 LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLLF 3449
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVRINVPYGAKLL+
Sbjct: 1163 LFMLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1222

Query: 3450 QELFSMGICLKFETEVC 3500
            QELFSMGICLKF+TEVC
Sbjct: 1223 QELFSMGICLKFDTEVC 1239


>ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Oryza brachyantha]
          Length = 1250

 Score = 1694 bits (4386), Expect = 0.0
 Identities = 814/1177 (69%), Positives = 966/1177 (82%), Gaps = 27/1177 (2%)
 Frame = +3

Query: 51   NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 230
            ++++ +LEKFCK AS++FF+E GLI HQINS+N FV  GLQELFDSLGEV+VEP YDPS 
Sbjct: 77   DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNDFVAYGLQELFDSLGEVTVEPSYDPSN 136

Query: 231  GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 410
             G G WRHA IK+GRV+L++P FW    D ++E LKL P+HARLQNMTYSSK+KVEV +Q
Sbjct: 137  RGPGGWRHAIIKFGRVKLEEPVFWAHGYDIDEESLKLKPRHARLQNMTYSSKMKVEVHIQ 196

Query: 411  VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 590
            V+  EKSDKAKTG D +  K+ +  E   I  G +PVMV S  CWL  L++SDC +DSGG
Sbjct: 197  VYSMEKSDKAKTGNDKFSYKKDIINETHYINFGRLPVMVMSNLCWLHKLKESDCQFDSGG 256

Query: 591  YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 770
            YF++KG EK FIAQEQ+CLTR+W+ ++P WT S  S I++RR+Y+KL+D++K +     K
Sbjct: 257  YFLIKGMEKVFIAQEQKCLTRIWVEERPCWTVSFLSAIRRRRIYIKLIDSTKNE---DRK 313

Query: 771  LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 950
            +IS+ FLYA MP+W+MFFALG TSDK+VF +ID+  CD  + N I ATI+++DE  EGFR
Sbjct: 314  IISISFLYANMPIWLMFFALGITSDKDVFDVIDMQDCDACVINTISATIKESDELCEGFR 373

Query: 951  AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 1130
             + ++R YV+ LIK +KFPP E FD+Y+++YLFP ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 374  KSDRARQYVDELIKDSKFPPGEPFDDYVARYLFPGISGNRNKALFLGYMVKCLLMAFTGK 433

Query: 1131 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 1310
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ DR+LQ ++RY DAS
Sbjct: 434  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSDRELQELDRYLDAS 493

Query: 1311 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 1490
            IITNGLNRAFSTG WCHP++K ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 494  IITNGLNRAFSTGSWCHPYKKNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 553

Query: 1491 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1670
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P++++ +SCGM KL +I   
Sbjct: 554  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAVVSSRVAQPVINRFISCGMNKLHEIPTE 613

Query: 1671 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1850
             + KMDK+FLNGDW+G C+D  SFV+  R MRRS  I  QVEIK D++QREVRVF+DAGR
Sbjct: 614  EVPKMDKIFLNGDWVGSCTDPASFVLRLRCMRRSGLIGPQVEIKWDKHQREVRVFSDAGR 673

Query: 1851 LLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQ---- 2018
            +LRP                  SFQSL+ + +IEFIGVEEEED  +AWGIR+L       
Sbjct: 674  ILRPLLVVENLNKIRRPKGGSYSFQSLMQQEIIEFIGVEEEEDTKSAWGIRHLFGSEGEK 733

Query: 2019 -------------------ENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQ 2141
                               E G   YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++
Sbjct: 734  AALVKTNRTEDAFTIRRDIEEGVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 793

Query: 2142 KHSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELF 2321
            KHS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTV+ADC+GR +Y+ G KD  +RPE F
Sbjct: 794  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVVADCIGRSEYTFGRKDDFARPEYF 853

Query: 2322 NGQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEM---SKRIKIK 2492
            NGQNAIVAVNVHQG+NQEDSLVMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+K
Sbjct: 854  NGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKSAPGGNKRLKMK 913

Query: 2493 DKVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQ 2672
            DK++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ
Sbjct: 914  DKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ 973

Query: 2673 KVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDI 2852
            +V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGV+GFLESQENFPFT  G+VPDI
Sbjct: 974  RVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVIGFLESQENFPFTCQGIVPDI 1033

Query: 2853 VINPHAFPTRQTPGQLLEAALGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSE 3032
            VINPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E
Sbjct: 1034 VINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAE 1093

Query: 3033 RVLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 3212
             VLNGRTGE M S+IF+GP FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF
Sbjct: 1094 SVLNGRTGERMHSLIFMGPNFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1153

Query: 3213 GEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGF 3389
            GEMERDCLLAHGAAANLHERLF LSDFSQMHIC+TC R ANVI R +  G  +RGPYCGF
Sbjct: 1154 GEMERDCLLAHGAAANLHERLFMLSDFSQMHICQTCERVANVIMRPVPGGKKIRGPYCGF 1213

Query: 3390 CKSAENIVRINVPYGAKLLFQELFSMGICLKFETEVC 3500
            C+S+ENI RINVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1214 CRSSENIARINVPYGAKLLYQELFSMGICLRFETEVC 1250


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score = 1693 bits (4384), Expect = 0.0
 Identities = 808/1157 (69%), Positives = 971/1157 (83%), Gaps = 2/1157 (0%)
 Frame = +3

Query: 36   SDPKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 215
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 76   SNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 135

Query: 216  YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 395
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+L V
Sbjct: 136  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTYASRLIV 192

Query: 396  EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 575
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L +S+CL
Sbjct: 193  EVTIQVYSLEKSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNESECL 252

Query: 576  YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 755
            +D+GGYF+VKG EK FIAQEQRCL RLW++D+P WT S  SEIK+RR+Y+KL+++++ + 
Sbjct: 253  FDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVESTRSED 312

Query: 756  LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 935
             +  K+I++ FLYATMPVW++FFALG +SDKEVF MID+  CD  + N I ATI+++D+ 
Sbjct: 313  FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIKESDKL 372

Query: 936  YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 1115
             E FR + K+R YV+ L+KS++FPP+ESFD+YI+++LFP ISG+R KA FLGY+VKCLL+
Sbjct: 373  CEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLM 432

Query: 1116 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 1295
             ++GKRKCDNK+DFRNKRLDL GELL  ELRA +R AEKRMVKA+QRDL+ DR+LQ +ER
Sbjct: 433  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLER 492

Query: 1296 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 1475
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 493  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 552

Query: 1476 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1655
            KAGDARYPNPSYW KLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 553  KAGDARYPNPSYWEKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCGMSKLN 612

Query: 1656 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1835
             I    + +MDK+FLNG+W+G C +S SFV   R MRRS  ID QVEIK D++  EVRVF
Sbjct: 613  DIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVF 672

Query: 1836 TDAGRLLRPXXXXXXXXXXXXXXXXXSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 2015
            TDAGR+LRP                  SF  L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 673  TDAGRILRPLLVVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 732

Query: 2016 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 2195
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 733  SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 792

Query: 2196 DTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 2372
            DTL HQ+YYPQRPLFKTVIADCLGR DY S G K+  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 793  DTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQ 852

Query: 2373 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 2552
            EDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 853  EDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 912

Query: 2553 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 2732
            DG P++GA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 913  DGLPYVGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 972

Query: 2733 VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 2912
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 973  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAA 1032

Query: 2913 LGKGIACGGKVTYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 3092
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWGSE VLNGRTGE ++S++F+GPT
Sbjct: 1033 LGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGSENVLNGRTGERVQSLVFMGPT 1092

Query: 3093 FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 3272
            FYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1093 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1152

Query: 3273 LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRINVPYGAKLLF 3449
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVRINVPYGAKLL+
Sbjct: 1153 LFLLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1212

Query: 3450 QELFSMGICLKFETEVC 3500
            QELFSMGICLKFET+VC
Sbjct: 1213 QELFSMGICLKFETQVC 1229