BLASTX nr result
ID: Ophiopogon24_contig00005646
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00005646
(977 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK70128.1| uncharacterized protein A4U43_C05F30550 [Asparagu... 296 1e-92
ref|XP_020265363.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme... 296 3e-87
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub... 262 2e-75
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub... 254 1e-72
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial... 249 5e-71
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub... 246 8e-70
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub... 245 1e-69
ref|XP_020114580.1| DNA-directed RNA polymerase I subunit 1 [Ana... 240 8e-68
gb|ONL97761.1| DNA-directed RNA polymerase I subunit 1 [Zea mays] 214 1e-61
gb|PKA56545.1| DNA-directed RNA polymerase II subunit RPB1 [Apos... 220 7e-61
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza... 220 7e-61
gb|KQL11441.1| hypothetical protein SETIT_005673mg [Setaria ital... 218 6e-60
ref|XP_022681373.1| DNA-directed RNA polymerase I subunit 1 [Set... 218 6e-60
ref|XP_021303065.1| DNA-directed RNA polymerase I subunit 1 [Sor... 216 1e-59
gb|ONL97757.1| DNA-directed RNA polymerase I subunit 1 [Zea mays] 214 5e-59
gb|ACN85329.1| putative RNA polymerase A(I) large subunit, parti... 214 5e-59
gb|ONL97770.1| DNA-directed RNA polymerase I subunit 1 [Zea mays] 214 6e-59
gb|ONL97756.1| DNA-directed RNA polymerase I subunit 1, partial ... 214 9e-59
gb|ONL97760.1| DNA-directed RNA polymerase I subunit 1, partial ... 214 9e-59
ref|XP_008655376.1| DNA-directed RNA polymerase I subunit 1 isof... 214 9e-59
>gb|ONK70128.1| uncharacterized protein A4U43_C05F30550 [Asparagus officinalis]
Length = 595
Score = 296 bits (758), Expect = 1e-92
Identities = 136/221 (61%), Positives = 176/221 (79%), Gaps = 2/221 (0%)
Frame = +3
Query: 321 NQAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSC 500
++APS+ V +++FSFYSPE++RN+ VK+IT P+LLD KG+ VPDG YD +GP + DSC
Sbjct: 5 SEAPSEFVKSVKFSFYSPEDVRNLSVKRITSPELLDAKGLQVPDGFYDPALGPINEIDSC 64
Query: 501 KSCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEML 680
K+CGQL YKCPGHCGHIELVKPV+NPL FN+LK LL++ CFFCH+FRF +KV+ Y L
Sbjct: 65 KTCGQLAYKCPGHCGHIELVKPVFNPLQFNSLKSLLHITCFFCHRFRFSTEKVQHYVAKL 124
Query: 681 THIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATT-SCELATDSKDAKKNTWTS 857
THIA+GD+LAAK L++S+++D+ +AE D KEK+ T CE DSK+AK N+WTS
Sbjct: 125 THIAKGDILAAKDLDSSSVYDIIYAE------DSKEKNITIHPCESGRDSKNAKDNSWTS 178
Query: 858 LQYAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
LQY EAIS ++++MK+R KCANCGK+N KISSPTFGWL K
Sbjct: 179 LQYVEAISALNIIMKNRPKKCANCGKSNLKISSPTFGWLSK 219
>ref|XP_020265363.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 1
[Asparagus officinalis]
Length = 1630
Score = 296 bits (758), Expect = 3e-87
Identities = 136/221 (61%), Positives = 176/221 (79%), Gaps = 2/221 (0%)
Frame = +3
Query: 321 NQAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSC 500
++APS+ V +++FSFYSPE++RN+ VK+IT P+LLD KG+ VPDG YD +GP + DSC
Sbjct: 5 SEAPSEFVKSVKFSFYSPEDVRNLSVKRITSPELLDAKGLQVPDGFYDPALGPINEIDSC 64
Query: 501 KSCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEML 680
K+CGQL YKCPGHCGHIELVKPV+NPL FN+LK LL++ CFFCH+FRF +KV+ Y L
Sbjct: 65 KTCGQLAYKCPGHCGHIELVKPVFNPLQFNSLKSLLHITCFFCHRFRFSTEKVQHYVAKL 124
Query: 681 THIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATT-SCELATDSKDAKKNTWTS 857
THIA+GD+LAAK L++S+++D+ +AE D KEK+ T CE DSK+AK N+WTS
Sbjct: 125 THIAKGDILAAKDLDSSSVYDIIYAE------DSKEKNITIHPCESGRDSKNAKDNSWTS 178
Query: 858 LQYAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
LQY EAIS ++++MK+R KCANCGK+N KISSPTFGWL K
Sbjct: 179 LQYVEAISALNIIMKNRPKKCANCGKSNLKISSPTFGWLSK 219
>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Elaeis
guineensis]
Length = 1674
Score = 262 bits (670), Expect = 2e-75
Identities = 122/219 (55%), Positives = 162/219 (73%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
+A S++VD+++F FY+ EEIR I VKKITKPDLLD K PVPDGLYD MGP DTDSCK
Sbjct: 8 EAASEVVDSVRFRFYTAEEIRRISVKKITKPDLLDSKNAPVPDGLYDPAMGPINDTDSCK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQL ++CPGHCGHI+L KP+YNPLLF NL+ LL + CFFC +FR +KV++Y E L
Sbjct: 68 SCGQLSFRCPGHCGHIDLAKPLYNPLLFRNLQNLLQITCFFCRRFRLNEEKVQRYAEQLD 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
IA+GDV+ A+ LEA + + +F +G E E+ + +T+ L + ++ TWTSLQ
Sbjct: 128 LIAKGDVVGARTLEAHSWGEYYFPDGGETESAV----ISTNESLLKITNLKQQQTWTSLQ 183
Query: 864 YAEAISVISVMMKSRA-KCANCGKNNPKISSPTFGWLCK 977
Y+EAIS++S ++ ++ KCANCG+ NP I+SPTFGWL K
Sbjct: 184 YSEAISIMSKFLREKSKKCANCGRKNPTITSPTFGWLNK 222
>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Phoenix
dactylifera]
Length = 1665
Score = 254 bits (649), Expect = 1e-72
Identities = 118/219 (53%), Positives = 159/219 (72%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
+A S++VD+++FSFY+ EEIR I VKKITKPDLLD K VPDGLYD +GP DTDSCK
Sbjct: 8 EAASEVVDSVRFSFYTAEEIRKISVKKITKPDLLDSKNASVPDGLYDPALGPINDTDSCK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQL ++CPGHCGHI+L +P+YNPLLF NL+ LL + CFFC KFR +KV++Y E L
Sbjct: 68 SCGQLSFRCPGHCGHIDLARPLYNPLLFRNLQNLLQITCFFCRKFRLNEEKVQRYAEQLC 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
IA+GD++ AK LEA + + +F E + K + TS L+ + ++ TWTSLQ
Sbjct: 128 LIAKGDIVGAKTLEAHSWGEFYF----PNEEETKSAAIHTSESLSKITNLKQQQTWTSLQ 183
Query: 864 YAEAISVISVMMKSRA-KCANCGKNNPKISSPTFGWLCK 977
++EA+S++S ++ ++ KCANC + NP I+SPTFGWL K
Sbjct: 184 HSEALSILSKFLREKSKKCANCSRKNPTITSPTFGWLNK 222
>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
Length = 1669
Score = 249 bits (636), Expect = 5e-71
Identities = 119/219 (54%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
+A S++VD++ F FY+ EEIR I VKKITKP LLD K PVPDGLYD MGP DTDSCK
Sbjct: 8 EAASEVVDSVHFHFYTAEEIRKISVKKITKPGLLDSKNAPVPDGLYDPAMGPINDTDSCK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQL ++CPGHCGHI+L K +YNPLLF NL+ LL + CFFCH+FR +KV++Y + L
Sbjct: 68 SCGQLSFRCPGHCGHIDLAKQLYNPLLFRNLQNLLQITCFFCHRFRLNEEKVQRYAKQLD 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
IA+GD++ A+ LEA + F EG E K +T+ L + ++ TWTSLQ
Sbjct: 128 LIAKGDIVGARTLEARSWG---FPEGEE----TKSAVISTNESLLKITNLKQQQTWTSLQ 180
Query: 864 YAEAISVISVMMKSRA-KCANCGKNNPKISSPTFGWLCK 977
Y+EA+S++S ++ ++ KCANCG+ NP I+SPTFGWL K
Sbjct: 181 YSEALSIMSKFLREKSKKCANCGRKNPTITSPTFGWLNK 219
>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
acuminata subsp. malaccensis]
Length = 1640
Score = 246 bits (628), Expect = 8e-70
Identities = 121/219 (55%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
+A S +VD++ FSFY+ EE+R I VKKITKPDLLD K PVPDGLYD +GP DTDSCK
Sbjct: 5 EAASGVVDSVYFSFYTSEEVRKISVKKITKPDLLDAKNSPVPDGLYDPALGPLNDTDSCK 64
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQL CPGHCGHI+L +P+YNPLLF L+ LL + CFFCHKF+ +KVK+Y +L
Sbjct: 65 SCGQLSVCCPGHCGHIDLARPLYNPLLFKTLQGLLQITCFFCHKFKINEEKVKRYVALLD 124
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
I +GD+ A+ LEA++ ++FF E E S T S + AK TWTSLQ
Sbjct: 125 LIVKGDINGARSLEANSWSEIFFPEEGTAE------SVTPS-----NFDKAKHLTWTSLQ 173
Query: 864 YAEAISVISVMMKS-RAKCANCGKNNPKISSPTFGWLCK 977
+EA+SV+S M+ R KC NCGK NP I SP FGWL K
Sbjct: 174 QSEALSVLSKFMRERRKKCDNCGKKNPTIHSPIFGWLNK 212
>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
acuminata subsp. malaccensis]
Length = 1641
Score = 245 bits (626), Expect = 1e-69
Identities = 118/222 (53%), Positives = 151/222 (68%), Gaps = 1/222 (0%)
Frame = +3
Query: 315 ILNQAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTD 494
+++QA S +V + F+FY+ EEIR I VKKITKPDLLD K P+PDGLYD +GP D D
Sbjct: 1 MMDQAASGVVKYVHFNFYTSEEIRKISVKKITKPDLLDAKNSPIPDGLYDPALGPLNDND 60
Query: 495 SCKSCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTE 674
SCKSCGQL +CPGHCGHI+L KP+YNPLLF L+ LL + CFFCHKF+ +KVK+Y
Sbjct: 61 SCKSCGQLSVRCPGHCGHIDLAKPLYNPLLFKTLQGLLQITCFFCHKFKINEEKVKRYVA 120
Query: 675 MLTHIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWT 854
L I +GD+ A+ LEA+ ++FF E E S T++ D+ ++K TWT
Sbjct: 121 QLDLIVKGDINGARSLEANTWSEIFFPEEETAE------SITSN----FDNANSKHLTWT 170
Query: 855 SLQYAEAISVISVMMKS-RAKCANCGKNNPKISSPTFGWLCK 977
SLQ +EA+S+ S M+ R KC NCGK NP I+SP FGWL K
Sbjct: 171 SLQQSEALSIFSKFMRERRKKCDNCGKKNPTINSPIFGWLNK 212
>ref|XP_020114580.1| DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
ref|XP_020114581.1| DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
Length = 1633
Score = 240 bits (613), Expect = 8e-68
Identities = 112/219 (51%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
+A S+ V+++ FSFY+ EEIR I VK+ITKPDLLD K +PV DGLYD +GP DTDSCK
Sbjct: 8 EAASETVESVHFSFYNEEEIRKISVKRITKPDLLDTKNVPVSDGLYDPALGPINDTDSCK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
+CGQL +CPGHCGHI+L +P+YNPLLF +L+ LL + CF CH F+ ++KV++YT L
Sbjct: 68 TCGQLSVRCPGHCGHIDLARPIYNPLLFKSLQTLLQITCFSCHNFKLDHEKVRRYTSQLK 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
I GD++ A+ LEA++ + + +E E ++ C + S + K+ TWTSLQ
Sbjct: 128 LILEGDIIGARNLEAASWNQLNSSE--------NETVSSADCTGESFSSNPKQRTWTSLQ 179
Query: 864 YAEAISVISVMMK-SRAKCANCGKNNPKISSPTFGWLCK 977
Y EA+SV+S +M+ R KC NC NP I+SPTFGWL K
Sbjct: 180 YTEALSVLSKLMREKRKKCNNCEAKNPTITSPTFGWLNK 218
>gb|ONL97761.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]
Length = 524
Score = 214 bits (545), Expect = 1e-61
Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
QA S+ VD+I FSFYS +EI+ I +KKITK + LD K +PVP GL D MGP D D CK
Sbjct: 8 QAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GD++ AK LE S + + + ++ E N TTS + ++ KD K TWTS+Q
Sbjct: 128 LLVKGDIVCAKNLEDS-VEEAYLSKEDENMN------KTTSGDNSSSVKD--KKTWTSIQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P ISSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVK 217
>gb|PKA56545.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
Length = 1660
Score = 220 bits (561), Expect = 7e-61
Identities = 112/220 (50%), Positives = 143/220 (65%), Gaps = 1/220 (0%)
Frame = +3
Query: 321 NQAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSC 500
++A S+ V+AI FSFY+ EE+R I VK+I+ P++LD K PVPDGLYD +GP KD+DSC
Sbjct: 8 DEAASESVEAIHFSFYTREEVRKISVKQISNPEILDAKDTPVPDGLYDPALGPMKDSDSC 67
Query: 501 KSCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEML 680
KSCGQ ++CPGH GHIEL +PVYNPLLF +LK LL + CF CHKFR G KV Y +L
Sbjct: 68 KSCGQKSFRCPGHYGHIELARPVYNPLLFGSLKSLLQITCFDCHKFRMGRQKVHNYVAVL 127
Query: 681 THIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSL 860
I +G+V AAK L +S+ + D+ S T D + +WTSL
Sbjct: 128 DLIIKGNVSAAKKLTSSSFSE-----------DVFGTSNTKHYVQPDLDVDYLRGSWTSL 176
Query: 861 QYAEAISV-ISVMMKSRAKCANCGKNNPKISSPTFGWLCK 977
Q AEA+SV + +M ++ KC NC K NPKI S TFGWL K
Sbjct: 177 QQAEAVSVLLEIMRENHRKCYNCKKVNPKIESRTFGWLEK 216
>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
Length = 1830
Score = 220 bits (561), Expect = 7e-61
Identities = 116/222 (52%), Positives = 144/222 (64%), Gaps = 1/222 (0%)
Frame = +3
Query: 315 ILNQAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTD 494
+L QA S+ VD+I FSFY+ +EIR I VK+ITK D LD K PVP GL D MGP DTD
Sbjct: 4 LLVQAASEEVDSIHFSFYNDDEIRRISVKQITKADRLDAKNCPVPGGLLDPAMGPTNDTD 63
Query: 495 SCKSCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTE 674
+CKSCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR +V +YT
Sbjct: 64 TCKSCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNRGQVDRYTN 123
Query: 675 MLTHIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWT 854
L + RGD+ AK LE S VF AE E E AT+ +LA + + TWT
Sbjct: 124 ELELLVRGDIALAKNLEDSG-GKVFLAEDDETE-------ATSGDKLA--CSEGENKTWT 173
Query: 855 SLQYAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
S+Q EA+S+ + ++K R KC +C K NPKIS P +GWL K
Sbjct: 174 SIQLKEALSIFAKLLKKRQKKCVHCDKKNPKISHPVYGWLIK 215
>gb|KQL11441.1| hypothetical protein SETIT_005673mg [Setaria italica]
Length = 1667
Score = 218 bits (554), Expect = 6e-60
Identities = 113/219 (51%), Positives = 139/219 (63%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
+A S+ VD+I FSFY +EI+ VKKITK + LD K +PVP GL D MGP DTD+CK
Sbjct: 8 EAASEEVDSIHFSFYGDDEIKRSSVKKITKSERLDAKNLPVPGGLLDPAMGPINDTDTCK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFTSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GDV AK LE S A SE + DI E TSC+ + KD K TWTS+Q
Sbjct: 128 LLVKGDVARAKNLEDSGKR----ASPSEEDEDITE---ATSCDKPSPEKD--KKTWTSVQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P SSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTFSSPIFGWLVK 217
>ref|XP_022681373.1| DNA-directed RNA polymerase I subunit 1 [Setaria italica]
Length = 1754
Score = 218 bits (554), Expect = 6e-60
Identities = 113/219 (51%), Positives = 139/219 (63%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
+A S+ VD+I FSFY +EI+ VKKITK + LD K +PVP GL D MGP DTD+CK
Sbjct: 8 EAASEEVDSIHFSFYGDDEIKRSSVKKITKSERLDAKNLPVPGGLLDPAMGPINDTDTCK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFTSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GDV AK LE S A SE + DI E TSC+ + KD K TWTS+Q
Sbjct: 128 LLVKGDVARAKNLEDSGKR----ASPSEEDEDITE---ATSCDKPSPEKD--KKTWTSVQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P SSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTFSSPIFGWLVK 217
>ref|XP_021303065.1| DNA-directed RNA polymerase I subunit 1 [Sorghum bicolor]
gb|KXG22455.1| hypothetical protein SORBI_3009G217200 [Sorghum bicolor]
Length = 1732
Score = 216 bits (551), Expect = 1e-59
Identities = 112/219 (51%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
QA S+ VD++ FSFYS +EI+ I +KKITK + LD K +PVP GL D MGP DTD+CK
Sbjct: 8 QAASEEVDSLHFSFYSDDEIKRISIKKITKLERLDAKNLPVPGGLLDPAMGPINDTDTCK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +L+ LL+V CF+CHKFR ++V +Y L
Sbjct: 68 SCGQNSVRCPGHFGHIELAKPLFNPLLFMSLRNLLHVTCFYCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GD++ AK LE S A SE + +I E TTS + ++ KD K TWTS+Q
Sbjct: 128 LLVKGDIVGAKNLEDSVKE----AYLSEEDENITE---TTSGDKSSSVKDNK--TWTSVQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P ISSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQTKCAKCDMKSPTISSPIFGWLVK 217
>gb|ONL97757.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]
Length = 1032
Score = 214 bits (545), Expect = 5e-59
Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
QA S+ VD+I FSFYS +EI+ I +KKITK + LD K +PVP GL D MGP D D CK
Sbjct: 8 QAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GD++ AK LE S + + + ++ E N TTS + ++ KD K TWTS+Q
Sbjct: 128 LLVKGDIVCAKNLEDS-VEEAYLSKEDENMN------KTTSGDNSSSVKD--KKTWTSIQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P ISSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVK 217
>gb|ACN85329.1| putative RNA polymerase A(I) large subunit, partial [Oryza
brachyantha]
Length = 1138
Score = 214 bits (546), Expect = 5e-59
Identities = 110/222 (49%), Positives = 145/222 (65%), Gaps = 1/222 (0%)
Frame = +3
Query: 315 ILNQAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTD 494
+L QA S+ V++I FSFY+ +EI+ I VK+ITKPD LD K PVP GL D MGP DTD
Sbjct: 4 LLVQAASEEVESIHFSFYNDDEIKRISVKQITKPDRLDAKNCPVPGGLLDPAMGPTSDTD 63
Query: 495 SCKSCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTE 674
+CKSCGQ +CPGH GHIEL KP++NPLLF +LK LL++ CF CHKFR ++V +YT+
Sbjct: 64 TCKSCGQHSVRCPGHFGHIELAKPLFNPLLFLSLKNLLHMTCFHCHKFRLNREQVDRYTD 123
Query: 675 MLTHIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWT 854
L + +GD+ AK LE S G + + +K+ TS + +T S+ K TWT
Sbjct: 124 ELELLVKGDIAHAKNLEDS---------GGKVLLEEDDKTEATSGDKSTCSESENK-TWT 173
Query: 855 SLQYAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
S+Q E +S+ + MK R KC +C K NPKIS P +GWL K
Sbjct: 174 SIQLKEVLSIFANFMKKRQKKCTHCNKKNPKISHPIYGWLIK 215
>gb|ONL97770.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]
Length = 1065
Score = 214 bits (545), Expect = 6e-59
Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
QA S+ VD+I FSFYS +EI+ I +KKITK + LD K +PVP GL D MGP D D CK
Sbjct: 8 QAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GD++ AK LE S + + + ++ E N TTS + ++ KD K TWTS+Q
Sbjct: 128 LLVKGDIVCAKNLEDS-VEEAYLSKEDENMN------KTTSGDNSSSVKD--KKTWTSIQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P ISSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVK 217
>gb|ONL97756.1| DNA-directed RNA polymerase I subunit 1, partial [Zea mays]
Length = 1475
Score = 214 bits (545), Expect = 9e-59
Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
QA S+ VD+I FSFYS +EI+ I +KKITK + LD K +PVP GL D MGP D D CK
Sbjct: 8 QAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GD++ AK LE S + + + ++ E N TTS + ++ KD K TWTS+Q
Sbjct: 128 LLVKGDIVCAKNLEDS-VEEAYLSKEDENMN------KTTSGDNSSSVKD--KKTWTSIQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P ISSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVK 217
>gb|ONL97760.1| DNA-directed RNA polymerase I subunit 1, partial [Zea mays]
Length = 1508
Score = 214 bits (545), Expect = 9e-59
Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
QA S+ VD+I FSFYS +EI+ I +KKITK + LD K +PVP GL D MGP D D CK
Sbjct: 8 QAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GD++ AK LE S + + + ++ E N TTS + ++ KD K TWTS+Q
Sbjct: 128 LLVKGDIVCAKNLEDS-VEEAYLSKEDENMN------KTTSGDNSSSVKD--KKTWTSIQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P ISSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVK 217
>ref|XP_008655376.1| DNA-directed RNA polymerase I subunit 1 isoform X3 [Zea mays]
gb|ONL97764.1| DNA-directed RNA polymerase I subunit 1 [Zea mays]
Length = 1509
Score = 214 bits (545), Expect = 9e-59
Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Frame = +3
Query: 324 QAPSQIVDAIQFSFYSPEEIRNIRVKKITKPDLLDQKGMPVPDGLYDLTMGPFKDTDSCK 503
QA S+ VD+I FSFYS +EI+ I +KKITK + LD K +PVP GL D MGP D D CK
Sbjct: 8 QAASEEVDSIHFSFYSDDEIKRISIKKITKSERLDAKNLPVPGGLLDPAMGPINDIDICK 67
Query: 504 SCGQLEYKCPGHCGHIELVKPVYNPLLFNNLKCLLNVVCFFCHKFRFGNDKVKQYTEMLT 683
SCGQ +CPGH GHIEL KP++NPLLF +LK LL+V CF CHKFR ++V +Y L
Sbjct: 68 SCGQHSVRCPGHFGHIELAKPLFNPLLFMSLKNLLHVTCFHCHKFRLNKEQVDRYVNELE 127
Query: 684 HIARGDVLAAKGLEASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQ 863
+ +GD++ AK LE S + + + ++ E N TTS + ++ KD K TWTS+Q
Sbjct: 128 LLVKGDIVCAKNLEDS-VEEAYLSKEDENMN------KTTSGDNSSSVKD--KKTWTSIQ 178
Query: 864 YAEAISVISVMMKSR-AKCANCGKNNPKISSPTFGWLCK 977
E +S+ S +MK R KCA C +P ISSP FGWL K
Sbjct: 179 LKEVLSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVK 217