BLASTX nr result

ID: Ophiopogon24_contig00005634 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005634
         (773 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK59589.1| uncharacterized protein A4U43_C08F8020 [Asparagus...    74   3e-13
ref|XP_008806309.1| PREDICTED: pre-mRNA-splicing factor cwc22-li...    59   1e-06

>gb|ONK59589.1| uncharacterized protein A4U43_C08F8020 [Asparagus officinalis]
          Length = 106

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 37/63 (58%), Positives = 45/63 (71%)
 Frame = -1

Query: 773 DPKILPKFSDLKAVYAGPAYITXXXXXXXXXXXXXLRKASDETSESEIATRGLRCLLRLD 594
           DP ILPK SDL A+YAGPAYI+             L++ +DE S+SEIAT+GLRCLLRLD
Sbjct: 44  DPGILPKLSDLSAIYAGPAYISSPAPSSLPFPAFFLKRTADEASKSEIATKGLRCLLRLD 103

Query: 593 EIA 585
           +IA
Sbjct: 104 DIA 106


>ref|XP_008806309.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Phoenix
           dactylifera]
          Length = 210

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
 Frame = -1

Query: 773 DPKILPK---FSDLKAVYAGPAYITXXXXXXXXXXXXXLRKASDETSESEIATRGLRCLL 603
           DP+ILPK   F+DL +VYAGPA+I              L+K  DE  +S+ ATR LRCLL
Sbjct: 145 DPEILPKKMGFADLGSVYAGPAFIASPAPSSLPFPAFFLKKTGDEAIKSDEATRSLRCLL 204

Query: 602 RLDEI 588
           RLD++
Sbjct: 205 RLDDL 209


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