BLASTX nr result

ID: Ophiopogon24_contig00005574 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005574
         (475 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAK02254.1| phage-related protein [Bartonella tribocorum CIP...    59   4e-07

>emb|CAK02254.1| phage-related protein [Bartonella tribocorum CIP 105476]
          Length = 1136

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/80 (43%), Positives = 40/80 (50%)
 Frame = -3

Query: 284 PFA*SKPLRHSHPLSTTVTTSTKLRHPLSTTATSSTMIRHPLSTTVTTSTKIRHPLSTTV 105
           P A +     SHP STT  T+T    P STTA +ST    P STT  TST    P STT 
Sbjct: 352 PAAANTTTHASHPTSTTANTATHAPQPTSTTANTSTHASQPTSTTANTSTHASQPTSTTA 411

Query: 104 TTSTKIRKK*KAVSTQANIA 45
           TTST       A +T +  A
Sbjct: 412 TTSTHASHPTPAAATTSTHA 431



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/68 (47%), Positives = 35/68 (51%)
 Frame = -3

Query: 254 SHPLSTTVTTSTKLRHPLSTTATSSTMIRHPLSTTVTTSTKIRHPLSTTVTTSTKIRKK* 75
           S P STT TTST   HP    AT+ST   HP      T+T   HP STT TTST      
Sbjct: 404 SQPTSTTATTSTHASHPTPAAATTSTHASHPTPAAANTATHASHPTSTTATTSTHAS--- 460

Query: 74  KAVSTQAN 51
           +  ST AN
Sbjct: 461 QPTSTTAN 468



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/70 (42%), Positives = 34/70 (48%)
 Frame = -3

Query: 254 SHPLSTTVTTSTKLRHPLSTTATSSTMIRHPLSTTVTTSTKIRHPLSTTVTTSTKIRKK* 75
           SHP     TTST   HP    A ++T   HP STT TTST    P STT  TST   +  
Sbjct: 418 SHPTPAAATTSTHASHPTPAAANTATHASHPTSTTATTSTHASQPTSTTANTSTHASQPA 477

Query: 74  KAVSTQANIA 45
            A +  A  A
Sbjct: 478 PATANTATHA 487


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