BLASTX nr result
ID: Ophiopogon24_contig00005555
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00005555
(361 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019703523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 111 1e-29
ref|XP_020248841.1| U6 snRNA-associated Sm-like protein LSm6 [As... 111 1e-29
ref|XP_008777983.1| PREDICTED: U6 snRNA-associated Sm-like prote... 111 1e-29
ref|XP_010905506.1| PREDICTED: U6 snRNA-associated Sm-like prote... 111 1e-29
gb|OAY80706.1| Sm-like protein LSM36B [Ananas comosus] 111 1e-29
ref|XP_020687863.1| U6 snRNA-associated Sm-like protein LSm6 [De... 111 1e-29
ref|XP_020595748.1| U6 snRNA-associated Sm-like protein LSm6 [Ph... 111 1e-29
gb|KMZ68383.1| U6 snRNA-associated Sm-like protein LSm6 [Zostera... 111 1e-29
ref|XP_020106378.1| U6 snRNA-associated Sm-like protein LSm6 [An... 111 1e-29
ref|XP_020111576.1| U6 snRNA-associated Sm-like protein LSm6 [An... 111 2e-29
dbj|GAU17248.1| hypothetical protein TSUD_109630 [Trifolium subt... 110 3e-29
gb|KRH40502.1| hypothetical protein GLYMA_09G262700 [Glycine max] 110 3e-29
ref|NP_001131392.1| Small nuclear ribonucleoprotein F [Zea mays]... 110 3e-29
dbj|BAF08844.1| Os02g0510100, partial [Oryza sativa Japonica Gro... 110 4e-29
gb|PAN06161.1| hypothetical protein PAHAL_A01264 [Panicum hallii] 110 4e-29
ref|XP_021315527.1| U6 snRNA-associated Sm-like protein LSm6 [So... 110 4e-29
ref|XP_004952559.2| U6 snRNA-associated Sm-like protein LSm6 [Se... 110 4e-29
ref|WP_100748562.1| hypothetical protein [Klebsiella pneumoniae]... 110 4e-29
ref|XP_006647271.1| PREDICTED: U6 snRNA-associated Sm-like prote... 110 4e-29
ref|XP_004975416.1| U6 snRNA-associated Sm-like protein LSm6 [Se... 110 4e-29
>ref|XP_019703523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Elaeis
guineensis]
Length = 89
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 10 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 63
>ref|XP_020248841.1| U6 snRNA-associated Sm-like protein LSm6 [Asparagus officinalis]
gb|ONK56161.1| uncharacterized protein A4U43_C10F4770 [Asparagus officinalis]
Length = 92
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 13 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 66
>ref|XP_008777983.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Phoenix
dactylifera]
Length = 92
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 13 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 66
>ref|XP_010905506.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Elaeis
guineensis]
Length = 93
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 14 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 67
>gb|OAY80706.1| Sm-like protein LSM36B [Ananas comosus]
Length = 95
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 16 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 69
>ref|XP_020687863.1| U6 snRNA-associated Sm-like protein LSm6 [Dendrobium catenatum]
gb|PKU66349.1| putative small nuclear ribonucleoprotein F [Dendrobium catenatum]
Length = 97
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 18 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 71
>ref|XP_020595748.1| U6 snRNA-associated Sm-like protein LSm6 [Phalaenopsis equestris]
Length = 97
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 18 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 71
>gb|KMZ68383.1| U6 snRNA-associated Sm-like protein LSm6 [Zostera marina]
Length = 98
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 15 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 68
>ref|XP_020106378.1| U6 snRNA-associated Sm-like protein LSm6 [Ananas comosus]
ref|XP_020106379.1| U6 snRNA-associated Sm-like protein LSm6 [Ananas comosus]
ref|XP_020106381.1| U6 snRNA-associated Sm-like protein LSm6 [Ananas comosus]
ref|XP_020106382.1| U6 snRNA-associated Sm-like protein LSm6 [Ananas comosus]
gb|OAY73733.1| Sm-like protein LSM36B [Ananas comosus]
Length = 101
Score = 111 bits (278), Expect = 1e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 22 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 75
>ref|XP_020111576.1| U6 snRNA-associated Sm-like protein LSm6 [Ananas comosus]
gb|OAY68319.1| Sm-like protein LSM36B [Ananas comosus]
Length = 113
Score = 111 bits (278), Expect = 2e-29
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 23 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 76
>dbj|GAU17248.1| hypothetical protein TSUD_109630 [Trifolium subterraneum]
Length = 80
Score = 110 bits (274), Expect = 3e-29
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 202 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 64
>gb|KRH40502.1| hypothetical protein GLYMA_09G262700 [Glycine max]
Length = 80
Score = 110 bits (274), Expect = 3e-29
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 202 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 65
>ref|NP_001131392.1| Small nuclear ribonucleoprotein F [Zea mays]
gb|ACF79786.1| unknown [Zea mays]
gb|ACG24769.1| small nuclear ribonucleoprotein F [Zea mays]
gb|AQK43256.1| Sm-like protein LSM6A [Zea mays]
Length = 95
Score = 110 bits (275), Expect = 3e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 16 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 69
>dbj|BAF08844.1| Os02g0510100, partial [Oryza sativa Japonica Group]
dbj|BAS78853.1| Os02g0510100, partial [Oryza sativa Japonica Group]
Length = 96
Score = 110 bits (275), Expect = 4e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 17 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 70
>gb|PAN06161.1| hypothetical protein PAHAL_A01264 [Panicum hallii]
Length = 97
Score = 110 bits (275), Expect = 4e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 19 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 72
>ref|XP_021315527.1| U6 snRNA-associated Sm-like protein LSm6 [Sorghum bicolor]
gb|KXG30274.1| hypothetical protein SORBI_3004G155700 [Sorghum bicolor]
Length = 97
Score = 110 bits (275), Expect = 4e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 19 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 72
>ref|XP_004952559.2| U6 snRNA-associated Sm-like protein LSm6 [Setaria italica]
Length = 97
Score = 110 bits (275), Expect = 4e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 18 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 71
>ref|WP_100748562.1| hypothetical protein [Klebsiella pneumoniae]
gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indica Group]
Length = 97
Score = 110 bits (275), Expect = 4e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 18 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 71
>ref|XP_006647271.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Oryza
brachyantha]
Length = 97
Score = 110 bits (275), Expect = 4e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 18 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 71
>ref|XP_004975416.1| U6 snRNA-associated Sm-like protein LSm6 [Setaria italica]
gb|KQK96977.1| hypothetical protein SETIT_011444mg [Setaria italica]
Length = 97
Score = 110 bits (275), Expect = 4e-29
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +1
Query: 199 VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 360
VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
Sbjct: 18 VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN 71