BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005545
         (1090 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   500   e-160
gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   494   e-158
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   407   e-125
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   407   e-125
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   405   e-125
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   405   e-125
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   398   e-122
ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isofo...   370   e-114
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   371   e-113
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   371   e-113
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   370   e-113
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   370   e-113
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   370   e-113
ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phal...   347   e-104
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   345   e-103
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   333   1e-99
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat...   333   1e-99
gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria ital...   303   2e-93
ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Seta...   313   2e-92
gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]      302   2e-91

>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  500 bits (1288), Expect = e-160
 Identities = 268/364 (73%), Positives = 291/364 (79%), Gaps = 2/364 (0%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDRHSGE FEILDGLMLKDG+LYKKVSIASIV+WGV+PSKDELLKFTEMSK +EEDVSWL
Sbjct: 286  RDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWL 345

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXXXXK 732
            S+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV                K
Sbjct: 346  SSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDK 405

Query: 731  EGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTL 552
            EGQEV+T+K+E IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYKGTL
Sbjct: 406  EGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTL 465

Query: 551  FIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTF 372
            FIYDE+QE NSGIFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQEDSS TF
Sbjct: 466  FIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSSCTF 523

Query: 371  SRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSI 192
            SRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ LS 
Sbjct: 524  SRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQLLSD 583

Query: 191  PNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNN 15
            PN+KRD A               GGLSGNGEQT+  SSWDG SSSWQ LSTS   F  NN
Sbjct: 584  PNLKRDTAG--------------GGLSGNGEQTLGASSWDGGSSSWQDLSTSAFSFSANN 629

Query: 14   DQKT 3
            DQK+
Sbjct: 630  DQKS 633


>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  494 bits (1272), Expect = e-158
 Identities = 267/364 (73%), Positives = 290/364 (79%), Gaps = 2/364 (0%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDRHSGE FEILDGLMLKDG+LYKKVSIASIV+WGV+PSKDELLKFTEMSK +EEDVSWL
Sbjct: 267  RDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWL 326

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXXXXK 732
            S+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV                K
Sbjct: 327  SSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDK 386

Query: 731  EGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTL 552
            EGQEV+T+K+E IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYKGTL
Sbjct: 387  EGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTL 446

Query: 551  FIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTF 372
            FIYDE+QE NSGIFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQEDSS  F
Sbjct: 447  FIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSS--F 502

Query: 371  SRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSI 192
            SRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ LS 
Sbjct: 503  SRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQLLSD 562

Query: 191  PNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNN 15
            PN+KRD A               GGLSGNGEQT+  SSWDG SSSWQ LSTS   F  NN
Sbjct: 563  PNLKRDTAG--------------GGLSGNGEQTLGASSWDGGSSSWQDLSTSAFSFSANN 608

Query: 14   DQKT 3
            DQK+
Sbjct: 609  DQKS 612


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  407 bits (1045), Expect = e-125
 Identities = 219/368 (59%), Positives = 263/368 (71%), Gaps = 6/368 (1%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE F+ILDGLMLKDGFLYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+
Sbjct: 324  RDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWV 383

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV                E
Sbjct: 384  SSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGME 443

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKGTLF
Sbjct: 444  GPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLF 503

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFS 369
            IYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+ F+
Sbjct: 504  IYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSHGFN 556

Query: 368  RNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIP 189
             +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++LS+P
Sbjct: 557  WHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYLSVP 616

Query: 188  NIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQALSTSTLFG 24
            N+KRD +A   ++ FGTQE    GLS  G Q V    WD +       SWQA   S    
Sbjct: 617  NVKRDDSAATTSNTFGTQE----GLSIAG-QHVDNGQWDASVPSFGRGSWQAFPGSNSSD 671

Query: 23   -NNNDQKT 3
             +NND K+
Sbjct: 672  VDNNDHKS 679


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  407 bits (1045), Expect = e-125
 Identities = 219/368 (59%), Positives = 263/368 (71%), Gaps = 6/368 (1%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE F+ILDGLMLKDGFLYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+
Sbjct: 326  RDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWV 385

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV                E
Sbjct: 386  SSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGME 445

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKGTLF
Sbjct: 446  GPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLF 505

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFS 369
            IYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+ F+
Sbjct: 506  IYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSHGFN 558

Query: 368  RNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIP 189
             +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++LS+P
Sbjct: 559  WHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYLSVP 618

Query: 188  NIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQALSTSTLFG 24
            N+KRD +A   ++ FGTQE    GLS  G Q V    WD +       SWQA   S    
Sbjct: 619  NVKRDDSAATTSNTFGTQE----GLSIAG-QHVDNGQWDASVPSFGRGSWQAFPGSNSSD 673

Query: 23   -NNNDQKT 3
             +NND K+
Sbjct: 674  VDNNDHKS 681


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  405 bits (1042), Expect = e-125
 Identities = 216/368 (58%), Positives = 261/368 (70%), Gaps = 6/368 (1%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE F+ILDGLMLKDGFLYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+
Sbjct: 324  RDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWV 383

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV                E
Sbjct: 384  SSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGME 443

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKGTLF
Sbjct: 444  GPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLF 503

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFS 369
            IYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+ F+
Sbjct: 504  IYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSHGFN 556

Query: 368  RNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIP 189
             +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++LS+P
Sbjct: 557  WHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYLSVP 616

Query: 188  NIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQALSTSTLFG 24
            N+KRD +A   ++ FGTQE  + G      Q V    WD +       SWQA   S    
Sbjct: 617  NVKRDDSAATTSNTFGTQEGLSIG------QHVDNGQWDASVPSFGRGSWQAFPGSNSSD 670

Query: 23   -NNNDQKT 3
             +NND K+
Sbjct: 671  VDNNDHKS 678


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  405 bits (1042), Expect = e-125
 Identities = 216/368 (58%), Positives = 261/368 (70%), Gaps = 6/368 (1%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE F+ILDGLMLKDGFLYK+VSI S++ W VQPS  ELLKF+ +SK  +ED++W+
Sbjct: 326  RDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSDMELLKFSNVSKVGDEDLTWV 385

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY  R KM+ SEAAD K  ++ GNGF LHD VLFG K FGV                E
Sbjct: 386  SSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGME 445

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ R+G+VRHMYKGTLF
Sbjct: 446  GPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDRQGIVRHMYKGTLF 505

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFS 369
            IYDEN+ ENSG FCAKS  CEN+   K       G KSS SF Q P+RS E++D S+ F+
Sbjct: 506  IYDENETENSGFFCAKSASCENLKELK-------GEKSSHSFFQPPMRSSEEQDRSHGFN 558

Query: 368  RNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIP 189
             +R S+ +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVKLDSLVKVITVE ++LS+P
Sbjct: 559  WHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKLDSLVKVITVEAEYLSVP 618

Query: 188  NIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA-----SSSWQALSTSTLFG 24
            N+KRD +A   ++ FGTQE  + G      Q V    WD +       SWQA   S    
Sbjct: 619  NVKRDDSAATTSNTFGTQEGLSIG------QHVDNGQWDASVPSFGRGSWQAFPGSNSSD 672

Query: 23   -NNNDQKT 3
             +NND K+
Sbjct: 673  VDNNDHKS 680


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  398 bits (1023), Expect = e-122
 Identities = 207/360 (57%), Positives = 261/360 (72%), Gaps = 1/360 (0%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE FEILDGLMLKDGFLYK+VSI S++ WGVQPS  ELLKF+ + K  +E ++W+
Sbjct: 322  RDRQTGEIFEILDGLMLKDGFLYKRVSIGSVICWGVQPSDMELLKFSSVGKDGDEHLNWV 381

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY+ R KM+ +EAAD +  ++ GNGF LHD VLFG K FGV                E
Sbjct: 382  SSVYHGRNKMRPTEAADQQVLAKKGNGFNLHDFVLFGHKAFGVIIAVEKDGFRILKGGVE 441

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G EV+T+K +DIKS CVDKMFTASDR+ KTI INDTVKVL+GPL+ ++G+V+HMYKGTLF
Sbjct: 442  GPEVVTVKIQDIKSACVDKMFTASDRYMKTISINDTVKVLEGPLQDKQGIVKHMYKGTLF 501

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFS 369
            IYDEN+ ENSG FCAKS  CEN+   K       G KSS SF+Q+P+ S E++D S+ F+
Sbjct: 502  IYDENETENSGFFCAKSASCENMKESK-------GEKSSHSFSQAPMGSYEEQDRSHGFN 554

Query: 368  RNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIP 189
              R +E +Q FSIGQTLRIRKGPLKGYLCRVV +YRSDVTVK+DSLVK+ITVE ++LS+P
Sbjct: 555  WRRQTERDQVFSIGQTLRIRKGPLKGYLCRVVGVYRSDVTVKVDSLVKIITVEAEYLSVP 614

Query: 188  NIKRDFAAEMPTDIFGTQERFT-GGLSGNGEQTVVTSSWDGASSSWQALSTSTLFGNNND 12
            N+KRD +A   ++ FGTQER + G  + NG+  V   S+     SWQA   S     +N+
Sbjct: 615  NVKRDDSAATTSNPFGTQERLSIGQHAENGQWDVGVPSF--GRDSWQAFPASNFSDVDNN 672


>ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isoform X5 [Ananas comosus]
          Length = 1429

 Score =  370 bits (951), Expect = e-114
 Identities = 199/374 (53%), Positives = 255/374 (68%), Gaps = 12/374 (3%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR SGE FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+ W+
Sbjct: 35   RDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWV 94

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV                E
Sbjct: 95   SSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTE 154

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G++F
Sbjct: 155  GSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIF 214

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSCEQEDSS 381
            IYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S E +DSS
Sbjct: 215  IYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISFENQDSS 274

Query: 380  YTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQF 201
                R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ +F
Sbjct: 275  SGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDAKF 334

Query: 200  LSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSSWQALS 42
            LS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  WQ  S
Sbjct: 335  LSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDGWQPFS 394

Query: 41   TSTL-FGNNNDQKT 3
             S L    N D KT
Sbjct: 395  ASKLSAAGNTDNKT 408


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  371 bits (952), Expect = e-113
 Identities = 199/373 (53%), Positives = 255/373 (68%), Gaps = 11/373 (2%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR SGE FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+ W+
Sbjct: 318  RDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWV 377

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV                E
Sbjct: 378  SSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTE 437

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G++F
Sbjct: 438  GSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIF 497

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRSCEQEDSSY 378
            IYDEN+ ENSG FCAKS+ CE I   ++S  SF    G+ S+S F++ P  S E +DSS 
Sbjct: 498  IYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTISFENQDSSS 557

Query: 377  TFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFL 198
               R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ +FL
Sbjct: 558  GAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDAKFL 617

Query: 197  SIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSSWQALST 39
            S+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  WQ  S 
Sbjct: 618  SVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDGWQPFSA 677

Query: 38   STL-FGNNNDQKT 3
            S L    N D KT
Sbjct: 678  SKLSAAGNTDNKT 690


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  371 bits (952), Expect = e-113
 Identities = 199/373 (53%), Positives = 255/373 (68%), Gaps = 11/373 (2%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR SGE FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+ W+
Sbjct: 321  RDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWV 380

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV                E
Sbjct: 381  SSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTE 440

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G++F
Sbjct: 441  GSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIF 500

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG-GNKSSSSFNQSPVRSCEQEDSSY 378
            IYDEN+ ENSG FCAKS+ CE I   ++S  SF    G+ S+S F++ P  S E +DSS 
Sbjct: 501  IYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLGDGSASLFSEPPTISFENQDSSS 560

Query: 377  TFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFL 198
               R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ +FL
Sbjct: 561  GAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDAKFL 620

Query: 197  SIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSSWQALST 39
            S+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  WQ  S 
Sbjct: 621  SVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDGWQPFSA 680

Query: 38   STL-FGNNNDQKT 3
            S L    N D KT
Sbjct: 681  SKLSAAGNTDNKT 693


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  370 bits (951), Expect = e-113
 Identities = 199/374 (53%), Positives = 255/374 (68%), Gaps = 12/374 (3%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR SGE FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+ W+
Sbjct: 321  RDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWV 380

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV                E
Sbjct: 381  SSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTE 440

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G++F
Sbjct: 441  GSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIF 500

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSCEQEDSS 381
            IYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S E +DSS
Sbjct: 501  IYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISFENQDSS 560

Query: 380  YTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQF 201
                R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ +F
Sbjct: 561  SGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDAKF 620

Query: 200  LSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSSWQALS 42
            LS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  WQ  S
Sbjct: 621  LSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDGWQPFS 680

Query: 41   TSTL-FGNNNDQKT 3
             S L    N D KT
Sbjct: 681  ASKLSAAGNTDNKT 694


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  370 bits (951), Expect = e-113
 Identities = 199/374 (53%), Positives = 255/374 (68%), Gaps = 12/374 (3%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR SGE FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+ W+
Sbjct: 321  RDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWV 380

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV                E
Sbjct: 381  SSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTE 440

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G++F
Sbjct: 441  GSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIF 500

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSCEQEDSS 381
            IYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S E +DSS
Sbjct: 501  IYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISFENQDSS 560

Query: 380  YTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQF 201
                R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ +F
Sbjct: 561  SGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDAKF 620

Query: 200  LSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSSWQALS 42
            LS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  WQ  S
Sbjct: 621  LSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDGWQPFS 680

Query: 41   TSTL-FGNNNDQKT 3
             S L    N D KT
Sbjct: 681  ASKLSAAGNTDNKT 694


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  370 bits (951), Expect = e-113
 Identities = 199/374 (53%), Positives = 255/374 (68%), Gaps = 12/374 (3%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR SGE FE+LDG+MLKDG++YK VS  S+VFWGVQPS+ ELLKF+ ++K D ED+ W+
Sbjct: 321  RDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSESELLKFSNVNKDDSEDLDWV 380

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S+VY+ RKK++ ++ +D+   +   N + LHDLVLFG+K FGV                E
Sbjct: 381  SSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKDFGVIVTVEKDGVRILKGGTE 440

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKVL+G LEGR+G+V+H+Y+G++F
Sbjct: 441  GSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVLEGSLEGRQGIVKHLYRGSIF 500

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDS--SFRKG--GNKSSSSFNQSPVRSCEQEDSS 381
            IYDEN+ ENSG FCAKS+ CE I   ++S  SF     G+ S+S F++ P  S E +DSS
Sbjct: 501  IYDENETENSGFFCAKSESCEKIKKSRESVNSFDDNLQGDGSASLFSEPPTISFENQDSS 560

Query: 380  YTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQF 201
                R R  + +  FSIGQTLRI KGPLKGYLCRVVRI+RS+VTVKLDSLVK+ITV+ +F
Sbjct: 561  SGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRVVRIFRSEVTVKLDSLVKIITVDAKF 620

Query: 200  LSIPNIKRDFAAEMPTDIFGTQER-FTGGLSGNG-EQTVVTSSWDG-----ASSSWQALS 42
            LS+P  KRD +    +D+FGTQE    G  S +G E     SSWD       S  WQ  S
Sbjct: 621  LSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGTESQPGRSSWDSPLPSFGSDGWQPFS 680

Query: 41   TSTL-FGNNNDQKT 3
             S L    N D KT
Sbjct: 681  ASKLSAAGNTDNKT 694


>ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phalaenopsis equestris]
          Length = 1960

 Score =  347 bits (890), Expect = e-104
 Identities = 190/387 (49%), Positives = 243/387 (62%), Gaps = 26/387 (6%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE FE+LDGLMLKDG+LYKKVSI S++ WGVQPS DEL KF +M     +DV WL
Sbjct: 326  RDRETGEIFEVLDGLMLKDGYLYKKVSICSLIHWGVQPSSDELTKFEDMGNDGVKDVGWL 385

Query: 908  STVYNVRKK------------------------MKSSEAADSKGASELGNGFILHDLVLF 801
            S++Y  + K                         K+ E ++ K   +  NGF + D VLF
Sbjct: 386  SSIYKTQIKNKLPETSHQKNGEKSKQKNGEKSNRKNGEKSNQKDEDKQRNGFEIDDFVLF 445

Query: 800  GRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDT 621
            G+K  G+                   EV++I    IK +CVDK+FTA+DR  KTI+I+D 
Sbjct: 446  GKKDCGIIIDKENDVFKVLKGDANSSEVVSINIGVIKKNCVDKVFTATDRGMKTIFIDDV 505

Query: 620  VKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN 441
            VKV +GPLEGREG+V+HMYKG  FIYDE Q EN+G FCAKS++C+ +   +D    K  +
Sbjct: 506  VKVSEGPLEGREGIVKHMYKGVFFIYDECQSENNGFFCAKSEICDLVKKSRDFGGGKLSS 565

Query: 440  KSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYR 261
             +  SF QSP+RS EQ+D+S +FSRN  S S   FS+GQTLRI KGPLKGYLCRV+RIYR
Sbjct: 566  NAGPSFAQSPIRSSEQDDNSQSFSRNHQSNSRGTFSVGQTLRICKGPLKGYLCRVIRIYR 625

Query: 260  SDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQ-ERFTGGLSGNGEQTVVT 84
            +DVTVKLDSL K++TV+E+ LS PN KRD A  M  D+FG+Q E+  GGL  +G    + 
Sbjct: 626  ADVTVKLDSLGKLLTVDEKLLSFPNSKRDDATTMQCDMFGSQEEQPIGGLLDSGGGFGMD 685

Query: 83   SSWDGASSSWQALSTSTL-FGNNNDQK 6
            +S  G   SW   S S   F  +ND K
Sbjct: 686  NSSFG-RESWNTPSCSGFSFSRDNDCK 711


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  345 bits (885), Expect = e-103
 Identities = 191/395 (48%), Positives = 245/395 (62%), Gaps = 34/395 (8%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE FE+LDGLMLKDG+LYKKVS+ S++ WGVQP+ DEL+KF E+ K + +DV WL
Sbjct: 325  RDRETGEIFEVLDGLMLKDGYLYKKVSMGSLIHWGVQPTSDELMKFEELDKDEVKDVDWL 384

Query: 908  STVYNVRKKMKSSEAADSKGASELG------------------------NGFILHDLVLF 801
            S++Y  R K K  E +  K   +                          NGF + DLVLF
Sbjct: 385  SSIYKARMKKKLPETSHQKNGEKYNQKDGEKSNPKVGEKSNQKDADKQINGFDIDDLVLF 444

Query: 800  GRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDT 621
            G+K  G+                 G EV++I    IK  CVDK+FTA+DR  KTI I+D 
Sbjct: 445  GKKSCGIIIDKENDTFKVLKGDVNGSEVVSINIRVIKKICVDKVFTATDRCMKTISIDDV 504

Query: 620  VKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGN 441
            VKV +GPLEGREG+VRHMYKG LFIYDE Q EN+G FCA S +C+ +   +D    K   
Sbjct: 505  VKVFEGPLEGREGIVRHMYKGVLFIYDECQSENNGFFCANSGICDLVKKSRDLGGGKLST 564

Query: 440  KSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYR 261
            ++  SF QSP+R  EQ+D+S +FSRN+ S S   FS+GQTLRIRKGPLKGYLCRV+R+ R
Sbjct: 565  RAGPSFAQSPIRLSEQDDNSQSFSRNQQSNSLGTFSVGQTLRIRKGPLKGYLCRVIRMRR 624

Query: 260  SDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQE-RFTGGL--SGNG---- 102
            +D+TVKLDSL K++TV+E+ LS+PN KRD A  M  ++FG+QE + T GL  +G G    
Sbjct: 625  ADITVKLDSLGKLLTVDEKLLSLPNSKRDDATAMQCNMFGSQEDQSTDGLLDAGGGLGMD 684

Query: 101  --EQTVVTSSWDGASSSWQALSTSTL-FGNNNDQK 6
              E     SS+     SW   S S+  F   ND K
Sbjct: 685  NFEFNAGMSSF--GRDSWNTASCSSFSFPRENDSK 717


>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  333 bits (854), Expect = 1e-99
 Identities = 182/376 (48%), Positives = 248/376 (65%), Gaps = 14/376 (3%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE FE+LDG+MLKDG+L+KKVS  S++F GVQPS  ELL F++++    ED++W+
Sbjct: 320  RDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSGVQPSSSELLMFSDVTNNMVEDLNWV 379

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S++YN RKK   +E  D + +    N + LHDLVLFG+K +GV                E
Sbjct: 380  SSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVLFGQKHYGVIIAVEKDCFKILKGDIE 439

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G+ V+T+K +DIK+ CVDKMFTA D  + TI+IND VK+L GPL+GREGVV+HMYKGTLF
Sbjct: 440  GENVVTVKIQDIKNSCVDKMFTALDWKKTTIFINDIVKILAGPLQGREGVVKHMYKGTLF 499

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDSSFRKG--GNKSSSSFNQSPVRSCEQEDSSYT 375
            I+ E + +NSG F  KS  CE +   K+S   K   G ++++SF+QSP+R+ ++E++++ 
Sbjct: 500  IHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAGKGKEANTSFSQSPIRTFDRENNAHG 559

Query: 374  FSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLS 195
             +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV IYRSDVTVKLDSLVK+ITV+++ L+
Sbjct: 560  STRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVGIYRSDVTVKLDSLVKLITVKDKSLA 619

Query: 194  IPNIKRDFA------AEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDG-----ASSSWQA 48
            +P IK D A      A + +D FG          G        SSWD         SWQ 
Sbjct: 620  VPKIKGDNATGSSDQATISSDHFGLSTACPS--FGETSTPAEKSSWDSVMPSFGRDSWQP 677

Query: 47   LSTS-TLFGNNNDQKT 3
             S+S +    NN+ +T
Sbjct: 678  FSSSNSSVACNNENQT 693


>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1809

 Score =  333 bits (854), Expect = 1e-99
 Identities = 182/376 (48%), Positives = 248/376 (65%), Gaps = 14/376 (3%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEMSKADEEDVSWL 909
            RDR +GE FE+LDG+MLKDG+L+KKVS  S++F GVQPS  ELL F++++    ED++W+
Sbjct: 321  RDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSGVQPSSSELLMFSDVTNNMVEDLNWV 380

Query: 908  STVYNVRKKMKSSEAADSKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKE 729
            S++YN RKK   +E  D + +    N + LHDLVLFG+K +GV                E
Sbjct: 381  SSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVLFGQKHYGVIIAVEKDCFKILKGDIE 440

Query: 728  GQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLF 549
            G+ V+T+K +DIK+ CVDKMFTA D  + TI+IND VK+L GPL+GREGVV+HMYKGTLF
Sbjct: 441  GENVVTVKIQDIKNSCVDKMFTALDWKKTTIFINDIVKILAGPLQGREGVVKHMYKGTLF 500

Query: 548  IYDENQEENSGIFCAKSDLCENITPPKDSSFRKG--GNKSSSSFNQSPVRSCEQEDSSYT 375
            I+ E + +NSG F  KS  CE +   K+S   K   G ++++SF+QSP+R+ ++E++++ 
Sbjct: 501  IHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAGKGKEANTSFSQSPIRTFDRENNAHG 560

Query: 374  FSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLS 195
             +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV IYRSDVTVKLDSLVK+ITV+++ L+
Sbjct: 561  STRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVGIYRSDVTVKLDSLVKLITVKDKSLA 620

Query: 194  IPNIKRDFA------AEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDG-----ASSSWQA 48
            +P IK D A      A + +D FG          G        SSWD         SWQ 
Sbjct: 621  VPKIKGDNATGSSDQATISSDHFGLSTACPS--FGETSTPAEKSSWDSVMPSFGRDSWQP 678

Query: 47   LSTS-TLFGNNNDQKT 3
             S+S +    NN+ +T
Sbjct: 679  FSSSNSSVACNNENQT 694


>gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria italica]
          Length = 711

 Score =  303 bits (776), Expect = 2e-93
 Identities = 166/364 (45%), Positives = 231/364 (63%), Gaps = 19/364 (5%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTE--MSKADEEDVS 915
            RDR +GE FE+LDGLM KDGFLYK+V+++S+++WG+QP++ ELLKF+   +++A  +D+ 
Sbjct: 335  RDRQTGEVFEVLDGLMFKDGFLYKRVALSSLIYWGIQPTETELLKFSSSPINRASADDLD 394

Query: 914  WLSTVYNVRK--------------KMKSSEAADSKGASEL---GNGFILHDLVLFGRKGF 786
            W+S++Y  +K              K KSS+A+ +  ++E     + F LHDLVLFGRK F
Sbjct: 395  WVSSIYGPKKRNLPAERGIKSPSSKTKSSKASKASTSTENYDDNDEFNLHDLVLFGRKDF 454

Query: 785  GVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLK 606
            GV                EG  V T+K +DIK  CVDKMFTA DR +K I INDTV VL+
Sbjct: 455  GVIIAIEKDGLRILKGGPEGSAV-TVKKQDIKKGCVDKMFTAVDRQKKIISINDTVNVLE 513

Query: 605  GPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSS 426
            GP +G++GVV+H+Y GTLFIY+E++ EN G FCA+   CEN+   K+SS  +  +     
Sbjct: 514  GPFQGKQGVVKHLYMGTLFIYNESESENCGFFCAQCGSCENVKKRKESSTTENLDNPIPM 573

Query: 425  FNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTV 246
            F++ P    E  D+     R   S   Q FSIGQ LRIRKGPLKGYLCRVV+I+R+DVTV
Sbjct: 574  FSE-PYEQNEHRDT----ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVKIFRNDVTV 628

Query: 245  KLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDGA 66
            KLDSL+K++TV+ +FLS+P  + D ++  P   FG+Q+    G   +       +SWD  
Sbjct: 629  KLDSLLKIVTVQAEFLSVPANRGDNSSGAPAGNFGSQDTSFFGSEAD------KASWDNG 682

Query: 65   SSSW 54
              S+
Sbjct: 683  LPSF 686


>ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Setaria italica]
          Length = 1702

 Score =  313 bits (801), Expect = 2e-92
 Identities = 174/381 (45%), Positives = 239/381 (62%), Gaps = 24/381 (6%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTE--MSKADEEDVS 915
            RDR +GE FE+LDGLM KDGFLYK+V+++S+++WG+QP++ ELLKF+   +++A  +D+ 
Sbjct: 335  RDRQTGEVFEVLDGLMFKDGFLYKRVALSSLIYWGIQPTETELLKFSSSPINRASADDLD 394

Query: 914  WLSTVYNVRK--------------KMKSSEAADSKGASEL---GNGFILHDLVLFGRKGF 786
            W+S++Y  +K              K KSS+A+ +  ++E     + F LHDLVLFGRK F
Sbjct: 395  WVSSIYGPKKRNLPAERGIKSPSSKTKSSKASKASTSTENYDDNDEFNLHDLVLFGRKDF 454

Query: 785  GVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLK 606
            GV                EG  V T+K +DIK  CVDKMFTA DR +K I INDTV VL+
Sbjct: 455  GVIIAIEKDGLRILKGGPEGSAV-TVKKQDIKKGCVDKMFTAVDRQKKIISINDTVNVLE 513

Query: 605  GPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSS 426
            GP +G++GVV+H+Y GTLFIY+E++ EN G FCA+   CEN+   K+SS  +  +     
Sbjct: 514  GPFQGKQGVVKHLYMGTLFIYNESESENCGFFCAQCGSCENVKKRKESSTTENLDNPIPM 573

Query: 425  FNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTV 246
            F++ P    E  D+     R   S   Q FSIGQ LRIRKGPLKGYLCRVV+I+R+DVTV
Sbjct: 574  FSE-PYEQNEHRDT----ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVKIFRNDVTV 628

Query: 245  KLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQERFTGGLSGNGEQTVVTSSWDG- 69
            KLDSL+K++TV+ +FLS+P  + D ++  P   FG+Q+    G   +       +SWD  
Sbjct: 629  KLDSLLKIVTVQAEFLSVPANRGDNSSGAPAGNFGSQDTSFFGSEAD------KASWDNG 682

Query: 68   ----ASSSWQALSTSTLFGNN 18
                 S SWQ  S+STL   N
Sbjct: 683  LPSFGSDSWQPFSSSTLPAQN 703


>gb|AQK94717.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 925

 Score =  302 bits (774), Expect = 2e-91
 Identities = 175/384 (45%), Positives = 234/384 (60%), Gaps = 27/384 (7%)
 Frame = -3

Query: 1088 RDRHSGEYFEILDGLMLKDGFLYKKVSIASIVFWGVQPSKDELLKFTEM--SKADEEDVS 915
            RDR +GE FE+LDGLM KDGFLYKKV+++S+++WG+QP++ ELLKF+    ++A  +D+ 
Sbjct: 182  RDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLD 241

Query: 914  WLSTVYNVRK--------------KMKSSEAADSKGASELGN-----GFILHDLVLFGRK 792
            WLS +Y  +K              K++SS+A+D K ++   N      F LHDLVL+GRK
Sbjct: 242  WLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRK 301

Query: 791  GFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKV 612
             FGV                EG  V  ++ +DIK  CVDKMFTA D  +KTI INDTV V
Sbjct: 302  DFGVIVAVEKDGFRILKGGPEGSAVK-VRKQDIKKGCVDKMFTAVDHQKKTISINDTVNV 360

Query: 611  LKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSS 432
            ++GP +G++GVV+H+Y G LFIY+E++ EN G FCA+S  CE I     SS  +  + ++
Sbjct: 361  VEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTT 420

Query: 431  SSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDV 252
              F   P  + EQ     T  R   S   Q FSIGQ LRIRKGPLKGYLCRVVRI+R+DV
Sbjct: 421  PMF---PEPAYEQNGHRDT-ERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDV 476

Query: 251  TVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPTDIFGTQE-RFTGGLSGNGEQTVVTSSW 75
            TVKLDSL+K++TV+   LS+P  + D  +  P   FG+Q+  F G  +G        +SW
Sbjct: 477  TVKLDSLLKIVTVQADLLSVPANRGDNLSGAPASKFGSQDTSFFGSEAGK-------TSW 529

Query: 74   DG-----ASSSWQALSTSTLFGNN 18
            D       S SWQ  S+STL   N
Sbjct: 530  DNGLPSFGSDSWQPFSSSTLSVQN 553