BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005544
         (773 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   431   e-137
ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   431   e-136
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   358   e-110
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   358   e-110
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   358   e-110
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   358   e-110
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   354   e-108
gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [...   321   e-105
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   338   e-103
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   338   e-103
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   338   e-103
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   338   e-103
gb|AQK94718.1| Protein RNA-directed DNA methylation 3, partial [...   313   e-102
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   331   e-100
gb|AQK87079.1| Protein RNA-directed DNA methylation 3 [Zea mays]      311   e-100
gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria ital...   317   e-100
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   330   e-100
gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]      313   9e-99
gb|AQK87074.1| Protein RNA-directed DNA methylation 3 [Zea mays]      321   2e-97
ref|XP_020395199.1| protein RNA-directed DNA methylation 3 [Zea ...   321   3e-97

>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  431 bits (1109), Expect = e-137
 Identities = 212/258 (82%), Positives = 236/258 (91%), Gaps = 1/258 (0%)
 Frame = -3

Query: 771 ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
           +SKGTWVRMK+GNYKGDLGQV+DYDD RK+ATIKLVPRIDLQAIAKK+GGGVSLKEA VP
Sbjct: 187 LSKGTWVRMKSGNYKGDLGQVVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKEAAVP 246

Query: 591 VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
            PRLISS ELE FRSHIEIRRDRH+GE FEILDGLMLKDGYLYKKVSIASIV+WGV+PSK
Sbjct: 247 SPRLISSHELEQFRSHIEIRRDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSK 306

Query: 411 DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
           DELLKFTEMSK EEEDVSWLSSVYN RKK+K S+ +D+KG+SE+GN FNLHDLVLFGRK 
Sbjct: 307 DELLKFTEMSKPEEEDVSWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKA 366

Query: 231 FGVIIDLGKDG-IKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKV 55
           FGVIID+GKDG +K+L+GD  GQEV+T+K E IKS+CVDKMFTASDRHRKTI IND +KV
Sbjct: 367 FGVIIDMGKDGTMKVLRGDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKV 426

Query: 54  SDGPLEGREGTVRHMYKG 1
            +GPLEGR+GT  HMYKG
Sbjct: 427 LEGPLEGRQGTACHMYKG 444


>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
           officinalis]
          Length = 1734

 Score =  431 bits (1109), Expect = e-136
 Identities = 212/258 (82%), Positives = 236/258 (91%), Gaps = 1/258 (0%)
 Frame = -3

Query: 771 ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
           +SKGTWVRMK+GNYKGDLGQV+DYDD RK+ATIKLVPRIDLQAIAKK+GGGVSLKEA VP
Sbjct: 206 LSKGTWVRMKSGNYKGDLGQVVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKEAAVP 265

Query: 591 VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
            PRLISS ELE FRSHIEIRRDRH+GE FEILDGLMLKDGYLYKKVSIASIV+WGV+PSK
Sbjct: 266 SPRLISSHELEQFRSHIEIRRDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSK 325

Query: 411 DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
           DELLKFTEMSK EEEDVSWLSSVYN RKK+K S+ +D+KG+SE+GN FNLHDLVLFGRK 
Sbjct: 326 DELLKFTEMSKPEEEDVSWLSSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKA 385

Query: 231 FGVIIDLGKDG-IKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKV 55
           FGVIID+GKDG +K+L+GD  GQEV+T+K E IKS+CVDKMFTASDRHRKTI IND +KV
Sbjct: 386 FGVIIDMGKDGTMKVLRGDKEGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKV 445

Query: 54  SDGPLEGREGTVRHMYKG 1
            +GPLEGR+GT  HMYKG
Sbjct: 446 LEGPLEGRQGTACHMYKG 463


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  358 bits (919), Expect = e-110
 Identities = 170/257 (66%), Positives = 210/257 (81%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+A VP
Sbjct: 244  VSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVP 303

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W VQPS 
Sbjct: 304  APRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSD 363

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLFG K 
Sbjct: 364  MELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKA 423

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+VKV 
Sbjct: 424  FGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVL 483

Query: 51   DGPLEGREGTVRHMYKG 1
            +GPL+ R+G VRHMYKG
Sbjct: 484  EGPLQDRQGIVRHMYKG 500


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  358 bits (919), Expect = e-110
 Identities = 170/257 (66%), Positives = 210/257 (81%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+A VP
Sbjct: 244  VSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVP 303

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W VQPS 
Sbjct: 304  APRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSD 363

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLFG K 
Sbjct: 364  MELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKA 423

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+VKV 
Sbjct: 424  FGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVL 483

Query: 51   DGPLEGREGTVRHMYKG 1
            +GPL+ R+G VRHMYKG
Sbjct: 484  EGPLQDRQGIVRHMYKG 500


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  358 bits (919), Expect = e-110
 Identities = 170/257 (66%), Positives = 210/257 (81%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+A VP
Sbjct: 246  VSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVP 305

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W VQPS 
Sbjct: 306  APRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSD 365

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLFG K 
Sbjct: 366  MELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKA 425

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+VKV 
Sbjct: 426  FGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVL 485

Query: 51   DGPLEGREGTVRHMYKG 1
            +GPL+ R+G VRHMYKG
Sbjct: 486  EGPLQDRQGIVRHMYKG 502


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  358 bits (919), Expect = e-110
 Identities = 170/257 (66%), Positives = 210/257 (81%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            +S+G+WVRMK+G YKGDL QV+  DD +K+  +KL+PR+DLQAI+KK+GGG+SLK+A VP
Sbjct: 246  VSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGGISLKQAAVP 305

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS ELE FR HIE+RRDR TGE F+ILDGLMLKDG+LYK+VSI S++ W VQPS 
Sbjct: 306  APRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSVICWAVQPSD 365

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ +SK  +ED++W+SSVY  R KM+ SE AD K  +++GNGFNLHD VLFG K 
Sbjct: 366  MELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLHDFVLFGHKA 425

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+VKV 
Sbjct: 426  FGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTISINDTVKVL 485

Query: 51   DGPLEGREGTVRHMYKG 1
            +GPL+ R+G VRHMYKG
Sbjct: 486  EGPLQDRQGIVRHMYKG 502


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  354 bits (908), Expect = e-108
 Identities = 168/257 (65%), Positives = 210/257 (81%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            +S+G+WVRMK+G YKGDL QV+  DD +K+  +KLVPR+DLQAI+KK+GGGVSLK+A VP
Sbjct: 242  VSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLVPRVDLQAISKKFGGGVSLKQAAVP 301

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS ELE FR HIE+RRDR TGE FEILDGLMLKDG+LYK+VSI S++ WGVQPS 
Sbjct: 302  APRLISSHELEMFRPHIEVRRDRQTGEIFEILDGLMLKDGFLYKRVSIGSVICWGVQPSD 361

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ + K  +E ++W+SSVY+ R KM+ +E AD +  +++GNGFNLHD VLFG K 
Sbjct: 362  MELLKFSSVGKDGDEHLNWVSSVYHGRNKMRPTEAADQQVLAKKGNGFNLHDFVLFGHKA 421

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVII + KDG +ILKG   G EV+T+K +DIKS CVDKMFTASDR+ KTI IND+VKV 
Sbjct: 422  FGVIIAVEKDGFRILKGGVEGPEVVTVKIQDIKSACVDKMFTASDRYMKTISINDTVKVL 481

Query: 51   DGPLEGREGTVRHMYKG 1
            +GPL+ ++G V+HMYKG
Sbjct: 482  EGPLQDKQGIVKHMYKG 498


>gb|AQK87064.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 483

 Score =  321 bits (823), Expect = e-105
 Identities = 157/278 (56%), Positives = 208/278 (74%), Gaps = 21/278 (7%)
 Frame = -3

Query: 771 ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
           IS+GTW+RMKNGNYKGDL QV++ D  RK+  IK++PR+DL AI+KK+GG VSLKEA VP
Sbjct: 102 ISRGTWIRMKNGNYKGDLAQVVNMDSGRKKVMIKIIPRVDLHAISKKFGGAVSLKEAAVP 161

Query: 591 VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
            PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+QP++
Sbjct: 162 APRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTE 221

Query: 411 DELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKGAS-- 286
            ELLKF+    ++A  +D+ WLS +Y ++K              K+KSS+  D+KG++  
Sbjct: 222 TELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPAERDMKSSSSKIKSSKAPDLKGSTST 281

Query: 285 ---EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDK 115
              +  + FNLHDLVL+GRK FGVII + KDG +ILKG   G  V T++ +DIK  CVDK
Sbjct: 282 ENYDDNDEFNLHDLVLYGRKDFGVIIAVEKDGFRILKGGPEGSAV-TVRKQDIKKGCVDK 340

Query: 114 MFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKG 1
           MFTA D H+KTI IND+V V +GP +G++G V+H+Y G
Sbjct: 341 MFTAVDHHKKTISINDTVNVVEGPFQGKQGLVKHLYLG 378


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  338 bits (866), Expect = e-103
 Identities = 160/257 (62%), Positives = 206/257 (80%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK A VP
Sbjct: 241  ISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVP 300

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGVQPS+
Sbjct: 301  APRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSE 360

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLFG+K 
Sbjct: 361  SELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKD 420

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKV 
Sbjct: 421  FGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVL 480

Query: 51   DGPLEGREGTVRHMYKG 1
            +G LEGR+G V+H+Y+G
Sbjct: 481  EGSLEGRQGIVKHLYRG 497


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  338 bits (866), Expect = e-103
 Identities = 160/257 (62%), Positives = 206/257 (80%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK A VP
Sbjct: 241  ISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVP 300

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGVQPS+
Sbjct: 301  APRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSE 360

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLFG+K 
Sbjct: 361  SELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKD 420

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKV 
Sbjct: 421  FGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVL 480

Query: 51   DGPLEGREGTVRHMYKG 1
            +G LEGR+G V+H+Y+G
Sbjct: 481  EGSLEGRQGIVKHLYRG 497


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  338 bits (866), Expect = e-103
 Identities = 160/257 (62%), Positives = 206/257 (80%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK A VP
Sbjct: 241  ISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVP 300

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGVQPS+
Sbjct: 301  APRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSE 360

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLFG+K 
Sbjct: 361  SELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKD 420

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKV 
Sbjct: 421  FGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVL 480

Query: 51   DGPLEGREGTVRHMYKG 1
            +G LEGR+G V+H+Y+G
Sbjct: 481  EGSLEGRQGIVKHLYRG 497


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  338 bits (866), Expect = e-103
 Identities = 160/257 (62%), Positives = 206/257 (80%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK A VP
Sbjct: 241  ISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVP 300

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS EL+ FR  IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGVQPS+
Sbjct: 301  APRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSE 360

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLFG+K 
Sbjct: 361  SELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKD 420

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKV 
Sbjct: 421  FGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVL 480

Query: 51   DGPLEGREGTVRHMYKG 1
            +G LEGR+G V+H+Y+G
Sbjct: 481  EGSLEGRQGIVKHLYRG 497


>gb|AQK94718.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 483

 Score =  313 bits (803), Expect = e-102
 Identities = 153/278 (55%), Positives = 206/278 (74%), Gaps = 21/278 (7%)
 Frame = -3

Query: 771 ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
           IS+GTW+RMKNGNYKGDL QV+  DD RK+  IK+VPR+DL AI+KK+GG VSLK A VP
Sbjct: 102 ISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKGAAVP 161

Query: 591 VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
            PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+QP++
Sbjct: 162 APRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTE 221

Query: 411 DELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKGAS-- 286
            ELLKF+    ++A  +D+ WLS +Y ++K              K++SS+ +D+K ++  
Sbjct: 222 TELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKASTST 281

Query: 285 ---EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDK 115
              ++ + FNLHDLVL+GRK FGVI+ + KDG +ILKG   G  V  ++ +DIK  CVDK
Sbjct: 282 ENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKGCVDK 340

Query: 114 MFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKG 1
           MFTA D  +KTI IND+V V +GP +G++G V+H+Y G
Sbjct: 341 MFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLG 378


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  331 bits (849), Expect = e-100
 Identities = 170/281 (60%), Positives = 201/281 (71%), Gaps = 24/281 (8%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            I KG WVRMKNG YKGDL +V+  +DA+KR TIKLVPRIDLQAI+KK+GGG SLK A +P
Sbjct: 245  IVKGMWVRMKNGKYKGDLAEVVLVNDAKKRVTIKLVPRIDLQAISKKFGGGTSLKAAAIP 304

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS ELE FR HIE+RRDR TGE FE+LDGLMLKDGYLYKKVS+ S++ WGVQP+ 
Sbjct: 305  APRLISSHELEDFRPHIEVRRDRETGEIFEVLDGLMLKDGYLYKKVSMGSLIHWGVQPTS 364

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSET------------------------A 304
            DEL+KF E+ K E +DV WLSS+Y AR K K  ET                        +
Sbjct: 365  DELMKFEELDKDEVKDVDWLSSIYKARMKKKLPETSHQKNGEKYNQKDGEKSNPKVGEKS 424

Query: 303  DVKGASEQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRC 124
            + K A +Q NGF++ DLVLFG+K  G+IID   D  K+LKGD  G EV++I    IK  C
Sbjct: 425  NQKDADKQINGFDIDDLVLFGKKSCGIIIDKENDTFKVLKGDVNGSEVVSINIRVIKKIC 484

Query: 123  VDKMFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKG 1
            VDK+FTA+DR  KTI I+D VKV +GPLEGREG VRHMYKG
Sbjct: 485  VDKVFTATDRCMKTISIDDVVKVFEGPLEGREGIVRHMYKG 525


>gb|AQK87079.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 523

 Score =  311 bits (797), Expect = e-100
 Identities = 153/270 (56%), Positives = 202/270 (74%), Gaps = 21/270 (7%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+GTW+RMKNGNYKGDL QV++ D  RK+  IK++PR+DL AI+KK+GG VSLKEA VP
Sbjct: 252  ISRGTWIRMKNGNYKGDLAQVVNMDSGRKKVMIKIIPRVDLHAISKKFGGAVSLKEAAVP 311

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+QP++
Sbjct: 312  APRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTE 371

Query: 411  DELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKGAS-- 286
             ELLKF+    ++A  +D+ WLS +Y ++K              K+KSS+  D+KG++  
Sbjct: 372  TELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPAERDMKSSSSKIKSSKAPDLKGSTST 431

Query: 285  ---EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDK 115
               +  + FNLHDLVL+GRK FGVII + KDG +ILKG   G  V T++ +DIK  CVDK
Sbjct: 432  ENYDDNDEFNLHDLVLYGRKDFGVIIAVEKDGFRILKGGPEGSAV-TVRKQDIKKGCVDK 490

Query: 114  MFTASDRHRKTIYINDSVKVSDGPLEGREG 25
            MFTA D H+KTI IND+V V +GP +G++G
Sbjct: 491  MFTAVDHHKKTISINDTVNVVEGPFQGKQG 520


>gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria italica]
          Length = 711

 Score =  317 bits (811), Expect = e-100
 Identities = 156/276 (56%), Positives = 205/276 (74%), Gaps = 19/276 (6%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+GTWVRMKNGNYKGDL QV+  DD RKR  IK++PR+DL AI++KYGG +SLKEA VP
Sbjct: 255  ISRGTWVRMKNGNYKGDLAQVVSEDDGRKRVLIKIIPRVDLHAISRKYGGAISLKEAVVP 314

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISSQELE FR HIE++RDR TGE FE+LDGLM KDG+LYK+V+++S+++WG+QP++
Sbjct: 315  APRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLYKRVALSSLIYWGIQPTE 374

Query: 411  DELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKGASE- 283
             ELLKF+   +++A  +D+ W+SS+Y  +K              K KSS+ +    ++E 
Sbjct: 375  TELLKFSSSPINRASADDLDWVSSIYGPKKRNLPAERGIKSPSSKTKSSKASKASTSTEN 434

Query: 282  --QGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMF 109
                + FNLHDLVLFGRK FGVII + KDG++ILKG   G  V T+K +DIK  CVDKMF
Sbjct: 435  YDDNDEFNLHDLVLFGRKDFGVIIAIEKDGLRILKGGPEGSAV-TVKKQDIKKGCVDKMF 493

Query: 108  TASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKG 1
            TA DR +K I IND+V V +GP +G++G V+H+Y G
Sbjct: 494  TAVDRQKKIISINDTVNVLEGPFQGKQGVVKHLYMG 529


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  330 bits (846), Expect = e-100
 Identities = 159/257 (61%), Positives = 204/257 (79%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+G+WVRMK+G YKGDL QV++ DD RKR  IKL+PRIDLQAI+KK+GGG+SLK A VP
Sbjct: 241  ISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGGGLSLKHAAVP 300

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISS ELE     IE RRDR +GE FE+LDG+MLKDGY+YK VS  S+VFWGVQPS+
Sbjct: 301  APRLISSHELEPL---IETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGSVVFWGVQPSE 357

Query: 411  DELLKFTEMSKAEEEDVSWLSSVYNARKKMKSSETADVKGASEQGNGFNLHDLVLFGRKG 232
             ELLKF+ ++K + ED+ W+SSVY+ RKK++ ++ +D    + + N + LHDLVLFG+K 
Sbjct: 358  SELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKLHDLVLFGQKD 417

Query: 231  FGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDKMFTASDRHRKTIYINDSVKVS 52
            FGVI+ + KDG++ILKG T G  V+T++ +DIKS CVDKMFTA DRH KTI +ND VKV 
Sbjct: 418  FGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKTISVNDIVKVL 477

Query: 51   DGPLEGREGTVRHMYKG 1
            +G LEGR+G V+H+Y+G
Sbjct: 478  EGSLEGRQGIVKHLYRG 494


>gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 748

 Score =  313 bits (803), Expect = 9e-99
 Identities = 153/278 (55%), Positives = 206/278 (74%), Gaps = 21/278 (7%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+GTW+RMKNGNYKGDL QV+  DD RK+  IK+VPR+DL AI+KK+GG VSLK A VP
Sbjct: 251  ISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHAISKKFGGAVSLKGAAVP 310

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+QP++
Sbjct: 311  APRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTE 370

Query: 411  DELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKGAS-- 286
             ELLKF+    ++A  +D+ WLS +Y ++K              K++SS+ +D+K ++  
Sbjct: 371  TELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSSSKIRSSKASDLKASTST 430

Query: 285  ---EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDK 115
               ++ + FNLHDLVL+GRK FGVI+ + KDG +ILKG   G  V  ++ +DIK  CVDK
Sbjct: 431  ENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGSAV-KVRKQDIKKGCVDK 489

Query: 114  MFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKG 1
            MFTA D  +KTI IND+V V +GP +G++G V+H+Y G
Sbjct: 490  MFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLG 527


>gb|AQK87074.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 1450

 Score =  321 bits (823), Expect = 2e-97
 Identities = 157/278 (56%), Positives = 208/278 (74%), Gaps = 21/278 (7%)
 Frame = -3

Query: 771 ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
           IS+GTW+RMKNGNYKGDL QV++ D  RK+  IK++PR+DL AI+KK+GG VSLKEA VP
Sbjct: 102 ISRGTWIRMKNGNYKGDLAQVVNMDSGRKKVMIKIIPRVDLHAISKKFGGAVSLKEAAVP 161

Query: 591 VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
            PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+QP++
Sbjct: 162 APRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTE 221

Query: 411 DELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKGAS-- 286
            ELLKF+    ++A  +D+ WLS +Y ++K              K+KSS+  D+KG++  
Sbjct: 222 TELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPAERDMKSSSSKIKSSKAPDLKGSTST 281

Query: 285 ---EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDK 115
              +  + FNLHDLVL+GRK FGVII + KDG +ILKG   G  V T++ +DIK  CVDK
Sbjct: 282 ENYDDNDEFNLHDLVLYGRKDFGVIIAVEKDGFRILKGGPEGSAV-TVRKQDIKKGCVDK 340

Query: 114 MFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKG 1
           MFTA D H+KTI IND+V V +GP +G++G V+H+Y G
Sbjct: 341 MFTAVDHHKKTISINDTVNVVEGPFQGKQGLVKHLYLG 378


>ref|XP_020395199.1| protein RNA-directed DNA methylation 3 [Zea mays]
 gb|AQK87066.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 1600

 Score =  321 bits (823), Expect = 3e-97
 Identities = 157/278 (56%), Positives = 208/278 (74%), Gaps = 21/278 (7%)
 Frame = -3

Query: 771  ISKGTWVRMKNGNYKGDLGQVMDYDDARKRATIKLVPRIDLQAIAKKYGGGVSLKEAGVP 592
            IS+GTW+RMKNGNYKGDL QV++ D  RK+  IK++PR+DL AI+KK+GG VSLKEA VP
Sbjct: 252  ISRGTWIRMKNGNYKGDLAQVVNMDSGRKKVMIKIIPRVDLHAISKKFGGAVSLKEAAVP 311

Query: 591  VPRLISSQELEHFRSHIEIRRDRHTGEYFEILDGLMLKDGYLYKKVSIASIVFWGVQPSK 412
             PRLISSQELE FR HIEI+RDR TGE FE+LDGLM KDG+LYKKV+++S+++WG+QP++
Sbjct: 312  APRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVALSSLIYWGIQPTE 371

Query: 411  DELLKFTE--MSKAEEEDVSWLSSVYNARK--------------KMKSSETADVKGAS-- 286
             ELLKF+    ++A  +D+ WLS +Y ++K              K+KSS+  D+KG++  
Sbjct: 372  TELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPAERDMKSSSSKIKSSKAPDLKGSTST 431

Query: 285  ---EQGNGFNLHDLVLFGRKGFGVIIDLGKDGIKILKGDTAGQEVMTIKFEDIKSRCVDK 115
               +  + FNLHDLVL+GRK FGVII + KDG +ILKG   G  V T++ +DIK  CVDK
Sbjct: 432  ENYDDNDEFNLHDLVLYGRKDFGVIIAVEKDGFRILKGGPEGSAV-TVRKQDIKKGCVDK 490

Query: 114  MFTASDRHRKTIYINDSVKVSDGPLEGREGTVRHMYKG 1
            MFTA D H+KTI IND+V V +GP +G++G V+H+Y G
Sbjct: 491  MFTAVDHHKKTISINDTVNVVEGPFQGKQGLVKHLYLG 528