BLASTX nr result

ID: Ophiopogon24_contig00005196 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005196
         (649 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75520.1| uncharacterized protein A4U43_C03F17750 [Asparagu...    70   3e-10
ref|XP_020257387.1| probable protein phosphatase 2C 71 [Asparagu...    61   2e-07

>gb|ONK75520.1| uncharacterized protein A4U43_C03F17750 [Asparagus officinalis]
          Length = 638

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 16/219 (7%)
 Frame = +1

Query: 31  DKEIGEKMEGAAESSDLGTESEVAAQDLGIWSG--DSDAVSEKTVDVISSSGNETVGLES 204
           D E GE+MEGA  S  L  E  V ++D  +  G   SDAVSEK + ++ S     + LES
Sbjct: 55  DGEFGERMEGAGGSEVLDREFGVESRDSDVEMGASGSDAVSEKEMGLVGSK----MCLES 110

Query: 205 EKLKEIEV-------SDGGAGLKTEDGELSVK---ATGLAVESDNVQSMSDSVEICEKEE 354
           E L  IEV       ++ G GL+ E    S++    TGL VES+      D   + E E 
Sbjct: 111 ENLDGIEVLGRNDALTEKGTGLEVESEIGSLERDQGTGLKVESETGLMERDQGCLLEVEP 170

Query: 355 SVDTEVLDSESELGDRRGCLEDE----SSALDAQRKLLVETLAGDQEEHAINXXXXXXXX 522
             D+   D E+E+   R C E E    S     + + + E++ GD++EH           
Sbjct: 171 ESDSLERDQETEMDSMRVCEEHEQVKTSQVCVDEEEEVEESMGGDRKEHITR--VETVDG 228

Query: 523 XXXXXXXXXXXXXXXXAEGGQEMRDIALQSDEVLEEKIS 639
                           AE GQE++   +  DE+ EE+ S
Sbjct: 229 SPENGEASIELESRGSAESGQEIQGKGMPWDEISEEEKS 267


>ref|XP_020257387.1| probable protein phosphatase 2C 71 [Asparagus officinalis]
          Length = 577

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
 Frame = +1

Query: 52  MEGAAESSDLGTESEVAAQDLGIWSG--DSDAVSEKTVDVISSSGNETVGLESEKLKEIE 225
           MEGA  S  L  E  V ++D  +  G   SDAVSEK + ++ S     + LESE L  IE
Sbjct: 1   MEGAGGSEVLDREFGVESRDSDVEMGASGSDAVSEKEMGLVGSK----MCLESENLDGIE 56

Query: 226 V-------SDGGAGLKTEDGELSVK---ATGLAVESDNVQSMSDSVEICEKEESVDTEVL 375
           V       ++ G GL+ E    S++    TGL VES+      D   + E E   D+   
Sbjct: 57  VLGRNDALTEKGTGLEVESEIGSLERDQGTGLKVESETGLMERDQGCLLEVEPESDSLER 116

Query: 376 DSESELGDRRGCLEDE----SSALDAQRKLLVETLAGDQEEHAINXXXXXXXXXXXXXXX 543
           D E+E+   R C E E    S     + + + E++ GD++EH                  
Sbjct: 117 DQETEMDSMRVCEEHEQVKTSQVCVDEEEEVEESMGGDRKEHITR--VETVDGSPENGEA 174

Query: 544 XXXXXXXXXAEGGQEMRDIALQSDEVLEEKIS 639
                    AE GQE++   +  DE+ EE+ S
Sbjct: 175 SIELESRGSAESGQEIQGKGMPWDEISEEEKS 206


Top