BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00005016
         (594 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD44440.1| DNA-directed RNA polymerase II second largest ch...   123   8e-33
gb|PKI79504.1| hypothetical protein CRG98_000135, partial [Punic...   120   3e-32
gb|PIM97099.1| DNA-directed RNA polymerase [Handroanthus impetig...   122   3e-32
gb|ACG39426.1| hypothetical protein [Zea mays]                        121   5e-32
dbj|BAS85479.1| Os03g0646800, partial [Oryza sativa Japonica Group]   122   5e-32
dbj|BAS85480.1| Os03g0646800 [Oryza sativa Japonica Group]            122   1e-31
gb|PIM99429.1| DNA-directed RNA polymerase [Handroanthus impetig...   122   6e-30
gb|PNX90950.1| DNA-directed RNA polymerase ii subunit rpb2-like ...   117   1e-29
ref|XP_018684753.1| PREDICTED: DNA-directed RNA polymerase II su...   125   1e-29
ref|XP_020677799.1| DNA-directed RNA polymerase II subunit RPB2 ...   125   1e-29
gb|PKA65122.1| DNA-directed RNA polymerase II subunit RPB2 [Apos...   125   1e-29
gb|OVA14931.1| DNA-directed RNA polymerase [Macleaya cordata]         125   1e-29
ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II su...   125   1e-29
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...   125   1e-29
gb|KFK28757.1| hypothetical protein AALP_AA7G042700, partial [Ar...   123   1e-29
ref|XP_019420119.1| PREDICTED: DNA-directed RNA polymerase II su...   123   2e-29
ref|XP_020578945.1| DNA-directed RNA polymerase II subunit RPB2 ...   124   3e-29
emb|CDP14782.1| unnamed protein product [Coffea canephora]            124   3e-29
gb|AQS22733.1| NA-directed RNA polymerase II 135 kDa polypeptide...   124   4e-29
gb|KDO44200.1| hypothetical protein CISIN_1g000996mg [Citrus sin...   124   4e-29

>dbj|BAD44440.1| DNA-directed RNA polymerase II second largest chain [Arabidopsis
           thaliana]
          Length = 124

 Score =  123 bits (309), Expect = 8e-33
 Identities = 60/61 (98%), Positives = 60/61 (98%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 21  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 592 F 594
           F
Sbjct: 81  F 81


>gb|PKI79504.1| hypothetical protein CRG98_000135, partial [Punica granatum]
          Length = 82

 Score =  120 bits (302), Expect = 3e-32
 Identities = 58/61 (95%), Positives = 60/61 (98%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD+SA+IEIRPESQHNPG QSD
Sbjct: 20  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDQSAEIEIRPESQHNPGHQSD 79

Query: 592 F 594
           F
Sbjct: 80  F 80


>gb|PIM97099.1| DNA-directed RNA polymerase [Handroanthus impetiginosus]
          Length = 122

 Score =  122 bits (305), Expect = 3e-32
 Identities = 59/61 (96%), Positives = 60/61 (98%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPG QSD
Sbjct: 27  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAEIEIRPESQHNPGHQSD 86

Query: 592 F 594
           F
Sbjct: 87  F 87


>gb|ACG39426.1| hypothetical protein [Zea mays]
          Length = 126

 Score =  121 bits (304), Expect = 5e-32
 Identities = 58/61 (95%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQ+DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 59  ITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 118

Query: 592 F 594
           F
Sbjct: 119 F 119


>dbj|BAS85479.1| Os03g0646800, partial [Oryza sativa Japonica Group]
          Length = 162

 Score =  122 bits (307), Expect = 5e-32
 Identities = 59/61 (96%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 86  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 145

Query: 592 F 594
           F
Sbjct: 146 F 146


>dbj|BAS85480.1| Os03g0646800 [Oryza sativa Japonica Group]
          Length = 195

 Score =  122 bits (307), Expect = 1e-31
 Identities = 59/61 (96%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 54  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 113

Query: 592 F 594
           F
Sbjct: 114 F 114


>gb|PIM99429.1| DNA-directed RNA polymerase [Handroanthus impetiginosus]
          Length = 333

 Score =  122 bits (305), Expect = 6e-30
 Identities = 59/61 (96%), Positives = 60/61 (98%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPG QSD
Sbjct: 27  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAEIEIRPESQHNPGHQSD 86

Query: 592 F 594
           F
Sbjct: 87  F 87


>gb|PNX90950.1| DNA-directed RNA polymerase ii subunit rpb2-like protein, partial
           [Trifolium pratense]
          Length = 164

 Score =  117 bits (292), Expect = 1e-29
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVIS+YF+ KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 28  ITQEDAWAVISSYFQTKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 87

Query: 592 F 594
           F
Sbjct: 88  F 88


>ref|XP_018684753.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
           acuminata subsp. malaccensis]
          Length = 1184

 Score =  125 bits (314), Expect = 1e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 16  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 75

Query: 592 F 594
           F
Sbjct: 76  F 76


>ref|XP_020677799.1| DNA-directed RNA polymerase II subunit RPB2 [Dendrobium catenatum]
 gb|PKU84997.1| DNA-directed RNA polymerase II subunit RPB2 [Dendrobium catenatum]
          Length = 1186

 Score =  125 bits (314), Expect = 1e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76

Query: 592 F 594
           F
Sbjct: 77  F 77


>gb|PKA65122.1| DNA-directed RNA polymerase II subunit RPB2 [Apostasia shenzhenica]
          Length = 1187

 Score =  125 bits (314), Expect = 1e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76

Query: 592 F 594
           F
Sbjct: 77  F 77


>gb|OVA14931.1| DNA-directed RNA polymerase [Macleaya cordata]
          Length = 1188

 Score =  125 bits (314), Expect = 1e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76

Query: 592 F 594
           F
Sbjct: 77  F 77


>ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
           nucifera]
          Length = 1189

 Score =  125 bits (314), Expect = 1e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 18  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 77

Query: 592 F 594
           F
Sbjct: 78  F 78


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
           vinifera]
 emb|CAN72948.1| hypothetical protein VITISV_033708 [Vitis vinifera]
 emb|CBI21848.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1193

 Score =  125 bits (314), Expect = 1e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 22  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81

Query: 592 F 594
           F
Sbjct: 82  F 82


>gb|KFK28757.1| hypothetical protein AALP_AA7G042700, partial [Arabis alpina]
          Length = 479

 Score =  123 bits (309), Expect = 1e-29
 Identities = 60/61 (98%), Positives = 60/61 (98%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 28  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 87

Query: 592 F 594
           F
Sbjct: 88  F 88


>ref|XP_019420119.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Lupinus angustifolius]
          Length = 547

 Score =  123 bits (309), Expect = 2e-29
 Identities = 60/61 (98%), Positives = 60/61 (98%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 28  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 87

Query: 592 F 594
           F
Sbjct: 88  F 88


>ref|XP_020578945.1| DNA-directed RNA polymerase II subunit RPB2 [Phalaenopsis
           equestris]
          Length = 1187

 Score =  124 bits (311), Expect = 3e-29
 Identities = 60/61 (98%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFE+KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17  ITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76

Query: 592 F 594
           F
Sbjct: 77  F 77


>emb|CDP14782.1| unnamed protein product [Coffea canephora]
          Length = 1201

 Score =  124 bits (311), Expect = 3e-29
 Identities = 60/61 (98%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFE+KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 30  ITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 89

Query: 592 F 594
           F
Sbjct: 90  F 90


>gb|AQS22733.1| NA-directed RNA polymerase II 135 kDa polypeptide, partial
           [Eleocharis dulcis]
          Length = 820

 Score =  124 bits (310), Expect = 4e-29
 Identities = 60/61 (98%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQS+
Sbjct: 26  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSE 85

Query: 592 F 594
           F
Sbjct: 86  F 86


>gb|KDO44200.1| hypothetical protein CISIN_1g000996mg [Citrus sinensis]
          Length = 1186

 Score =  124 bits (310), Expect = 4e-29
 Identities = 60/61 (98%), Positives = 61/61 (100%)
 Frame = +1

Query: 412 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 591
           ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG+QSD
Sbjct: 23  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82

Query: 592 F 594
           F
Sbjct: 83  F 83