BLASTX nr result
ID: Ophiopogon24_contig00004480
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00004480
(566 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009412278.1| PREDICTED: 50S ribosomal protein 6, chloropl... 74 7e-14
ref|XP_022772446.1| 50S ribosomal protein 6, chloroplastic-like ... 74 9e-14
ref|XP_009392950.1| PREDICTED: 50S ribosomal protein 6, chloropl... 74 1e-13
ref|XP_020096988.1| 50S ribosomal protein 6, chloroplastic [Anan... 74 1e-13
ref|XP_004979460.1| 50S ribosomal protein 6, chloroplastic [Seta... 73 2e-13
ref|XP_022772445.1| 50S ribosomal protein 6, chloroplastic-like ... 74 2e-13
gb|PAN43036.1| hypothetical protein PAHAL_H02321 [Panicum hallii] 73 2e-13
ref|XP_020572250.1| 50S ribosomal protein 6, chloroplastic [Phal... 73 3e-13
gb|PHU20597.1| 50S ribosomal protein 6, chloroplastic [Capsicum ... 72 3e-13
ref|XP_016568958.1| PREDICTED: 50S ribosomal protein 6, chloropl... 71 9e-13
gb|OAY79761.1| 50S ribosomal protein 6, chloroplastic [Ananas co... 74 1e-12
ref|XP_020697348.1| 50S ribosomal protein 6, chloroplastic [Dend... 70 2e-12
ref|XP_010245611.1| PREDICTED: 50S ribosomal protein 6, chloropl... 70 3e-12
gb|PHT50919.1| 50S ribosomal protein 6, chloroplastic [Capsicum ... 70 3e-12
ref|XP_010936230.1| PREDICTED: 50S ribosomal protein 6, chloropl... 70 4e-12
dbj|GAV59874.1| hypothetical protein CFOL_v3_03405, partial [Cep... 69 5e-12
ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea ma... 69 7e-12
ref|XP_022940737.1| 50S ribosomal protein 6, chloroplastic-like ... 69 7e-12
gb|PKA50400.1| 50S ribosomal protein 6, chloroplastic [Apostasia... 69 7e-12
gb|ACG40770.1| plastid-specific ribosomal protein 6 precursor [Z... 69 7e-12
>ref|XP_009412278.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Musa
acuminata subsp. malaccensis]
Length = 100
Score = 73.9 bits (180), Expect = 7e-14
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1
Query: 407 KQKVPAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRRG 285
K P M VECSSRPQKKAT+HHMKTRPKKTQPWDV+R+G
Sbjct: 22 KSPSPGGMAVECSSRPQKKATSHHMKTRPKKTQPWDVRRKG 62
>ref|XP_022772446.1| 50S ribosomal protein 6, chloroplastic-like [Durio zibethinus]
Length = 124
Score = 74.3 bits (181), Expect = 9e-14
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = -1
Query: 467 ASSTIGMLRTVVPSVEPPSLKQKVPAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
+++ I L +PSV PS K K + VECSSRPQKKAT HHMKTRP+KTQPWD++R+
Sbjct: 8 SATKITFLPNSIPSV--PSFKTKSNGGLVVECSSRPQKKATKHHMKTRPRKTQPWDIRRK 65
>ref|XP_009392950.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Musa
acuminata subsp. malaccensis]
Length = 108
Score = 73.6 bits (179), Expect = 1e-13
Identities = 44/72 (61%), Positives = 46/72 (63%), Gaps = 10/72 (13%)
Frame = -1
Query: 470 MASSTIGMLRTVVP-----SVEPPSLKQKVPAV-----MTVECSSRPQKKATAHHMKTRP 321
MAS T GML VP S P + P M VECSSRPQKKATAHHMKTRP
Sbjct: 1 MASIT-GMLAYAVPMSCTSSSRPRASSPASPGGGGGGWMGVECSSRPQKKATAHHMKTRP 59
Query: 320 KKTQPWDVKRRG 285
KKTQPWDVKR+G
Sbjct: 60 KKTQPWDVKRKG 71
>ref|XP_020096988.1| 50S ribosomal protein 6, chloroplastic [Ananas comosus]
Length = 112
Score = 73.6 bits (179), Expect = 1e-13
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -1
Query: 395 PAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRRG 285
P + VECSSRPQKKAT+HHMKTRPKKTQPWDVKR+G
Sbjct: 38 PGMAVVECSSRPQKKATSHHMKTRPKKTQPWDVKRKG 74
>ref|XP_004979460.1| 50S ribosomal protein 6, chloroplastic [Setaria italica]
Length = 117
Score = 73.2 bits (178), Expect = 2e-13
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = -1
Query: 431 PSVEPPSLKQKVPAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
P+V PSL A + VECSSRPQKK T HHMKTRPKKTQPWD+KRR
Sbjct: 25 PTVGFPSLLGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR 72
>ref|XP_022772445.1| 50S ribosomal protein 6, chloroplastic-like [Durio zibethinus]
Length = 161
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = -1
Query: 467 ASSTIGMLRTVVPSVEPPSLKQKVPAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
+++ I L +PSV PS K K + VECSSRPQKKAT HHMKTRP+KTQPWD++R+
Sbjct: 8 SATKITFLPNSIPSV--PSFKTKSNGGLVVECSSRPQKKATKHHMKTRPRKTQPWDIRRK 65
>gb|PAN43036.1| hypothetical protein PAHAL_H02321 [Panicum hallii]
Length = 119
Score = 73.2 bits (178), Expect = 2e-13
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = -1
Query: 431 PSVEPPSLKQKVPAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
PS P+L A + VECSSRPQKKAT HHMKTRPKKTQPWD+KRR
Sbjct: 25 PSFGFPTLPGGGRAALAVECSSRPQKKATKHHMKTRPKKTQPWDIKRR 72
>ref|XP_020572250.1| 50S ribosomal protein 6, chloroplastic [Phalaenopsis equestris]
Length = 119
Score = 72.8 bits (177), Expect = 3e-13
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = -1
Query: 386 MTVECSSRPQKKATAHHMKTRPKKTQPWDVKRRG 285
MTVECSSRP+KK TAHHMKTRPKKTQPWDVKR+G
Sbjct: 38 MTVECSSRPKKKGTAHHMKTRPKKTQPWDVKRKG 71
>gb|PHU20597.1| 50S ribosomal protein 6, chloroplastic [Capsicum chinense]
Length = 108
Score = 72.4 bits (176), Expect = 3e-13
Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
Frame = -1
Query: 467 ASSTIGMLRTVVPSVEPPSLKQ--------KVPAV--MTVECSSRPQKKATAHHMKTRPK 318
AS+ G+ V+P P S K+PA M +ECSSRPQKKATAHH KTRPK
Sbjct: 3 ASAIFGLKMPVLPRFSPISTTAFSGGATTTKLPAAAPMVIECSSRPQKKATAHHQKTRPK 62
Query: 317 KTQPWDVKRR 288
KTQPWD++R+
Sbjct: 63 KTQPWDIRRK 72
>ref|XP_016568958.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Capsicum annuum]
gb|PHT84446.1| 50S ribosomal protein 6, chloroplastic [Capsicum annuum]
Length = 108
Score = 71.2 bits (173), Expect = 9e-13
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = -1
Query: 446 LRTVVPSVEPPSLKQKVPAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
+ T SV + K A M +ECSSRPQKKATAHH KTRPKKTQPWD++R+
Sbjct: 20 ISTTAFSVGATTTKLPAAAPMVIECSSRPQKKATAHHQKTRPKKTQPWDIRRK 72
>gb|OAY79761.1| 50S ribosomal protein 6, chloroplastic [Ananas comosus]
Length = 227
Score = 73.6 bits (179), Expect = 1e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -1
Query: 395 PAVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRRG 285
P + VECSSRPQKKAT+HHMKTRPKKTQPWDVKR+G
Sbjct: 153 PGMAVVECSSRPQKKATSHHMKTRPKKTQPWDVKRKG 189
>ref|XP_020697348.1| 50S ribosomal protein 6, chloroplastic [Dendrobium catenatum]
gb|PKU78394.1| 50S ribosomal protein 6, chloroplastic [Dendrobium catenatum]
Length = 117
Score = 70.5 bits (171), Expect = 2e-12
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1
Query: 386 MTVECSSRPQKKATAHHMKTRPKKTQPWDVKRRG 285
M VECSSRP+KK TAHHMKTRPKKTQPWDVKR+G
Sbjct: 38 MMVECSSRPKKKGTAHHMKTRPKKTQPWDVKRKG 71
>ref|XP_010245611.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Nelumbo
nucifera]
Length = 97
Score = 69.7 bits (169), Expect = 3e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = -1
Query: 386 MTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
M +ECSSRP+KKATAHHMKTRPKKTQPWDV+RR
Sbjct: 33 MVIECSSRPKKKATAHHMKTRPKKTQPWDVRRR 65
>gb|PHT50919.1| 50S ribosomal protein 6, chloroplastic [Capsicum baccatum]
Length = 98
Score = 69.7 bits (169), Expect = 3e-12
Identities = 30/44 (68%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = -1
Query: 413 SLKQKVPAV--MTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
++ K+PA M +ECSSRPQKKATAHH KTRPKKTQPWD++R+
Sbjct: 19 AITTKLPAAAPMVIECSSRPQKKATAHHQKTRPKKTQPWDIRRK 62
>ref|XP_010936230.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Elaeis
guineensis]
Length = 110
Score = 69.7 bits (169), Expect = 4e-12
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = -1
Query: 386 MTVECSSRPQKKATAHHMKTRPKKTQPWDVKRRG 285
+ VECSSRP+KKATAHHMKTRPKKTQPWD++R+G
Sbjct: 37 LVVECSSRPKKKATAHHMKTRPKKTQPWDIRRKG 70
>dbj|GAV59874.1| hypothetical protein CFOL_v3_03405, partial [Cephalotus
follicularis]
Length = 110
Score = 69.3 bits (168), Expect = 5e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = -1
Query: 386 MTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
+ VECSSRPQKKATAHHMKTRP+KTQPWDVKR+
Sbjct: 37 LVVECSSRPQKKATAHHMKTRPRKTQPWDVKRK 69
>ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea mays]
gb|ACG29467.1| plastid-specific ribosomal protein 6 precursor [Zea mays]
gb|AQK58760.1| Plastid-specific ribosomal protein 6 [Zea mays]
Length = 121
Score = 69.3 bits (168), Expect = 7e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -1
Query: 392 AVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
A + VECSSRPQKK T HHMKTRPKKTQPWD+KRR
Sbjct: 41 AALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR 75
>ref|XP_022940737.1| 50S ribosomal protein 6, chloroplastic-like [Cucurbita moschata]
Length = 108
Score = 68.9 bits (167), Expect = 7e-12
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = -1
Query: 464 SSTIGMLRTVVPSVEPPSLKQKVPAV---MTVECSSRPQKKATAHHMKTRPKKTQPWDVK 294
S+ G +V P V+P + P + +ECSSRP KKATAHHMKTRP+K+QPWD+K
Sbjct: 4 STFFGCRISVPPLVKPSARNAAAPCSGGSLVIECSSRPNKKATAHHMKTRPRKSQPWDIK 63
Query: 293 RR 288
R+
Sbjct: 64 RK 65
>gb|PKA50400.1| 50S ribosomal protein 6, chloroplastic [Apostasia shenzhenica]
Length = 122
Score = 69.3 bits (168), Expect = 7e-12
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 386 MTVECSSRPQKKATAHHMKTRPKKTQPWDVKRRG 285
M ECSSRPQKK T HHMKTRPKKTQPWDVKR+G
Sbjct: 38 MAAECSSRPQKKGTVHHMKTRPKKTQPWDVKRKG 71
>gb|ACG40770.1| plastid-specific ribosomal protein 6 precursor [Zea mays]
Length = 123
Score = 69.3 bits (168), Expect = 7e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -1
Query: 392 AVMTVECSSRPQKKATAHHMKTRPKKTQPWDVKRR 288
A + VECSSRPQKK T HHMKTRPKKTQPWD+KRR
Sbjct: 43 AALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR 77