BLASTX nr result

ID: Ophiopogon24_contig00004255 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00004255
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263463.1| elongation factor G-1, chloroplastic, partia...    62   2e-08

>ref|XP_020263463.1| elongation factor G-1, chloroplastic, partial [Asparagus
           officinalis]
          Length = 744

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 40/58 (68%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = +2

Query: 251 LASNLRRGSEFFGGNLRLRSKSPSVPFP-REQNIHRR-SVKAMAAPEEAKRQIPLKDY 418
           L S+L + S+FFG N+RLRSKS +VPF  RE++ H + SVKAMAAPEEAKRQIPLKDY
Sbjct: 2   LPSSLVQSSDFFG-NVRLRSKS-AVPFVLRERSGHGQGSVKAMAAPEEAKRQIPLKDY 57


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