BLASTX nr result

ID: Ophiopogon24_contig00004252 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00004252
         (937 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK59954.1| uncharacterized protein A4U43_C08F12660 [Asparagu...    66   3e-08
ref|XP_020244606.1| LOW QUALITY PROTEIN: pentatricopeptide repea...    66   3e-08

>gb|ONK59954.1| uncharacterized protein A4U43_C08F12660 [Asparagus officinalis]
          Length = 770

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
 Frame = +1

Query: 655 IINVSGFVRNGLPEEELKLFNWTRAEGV*TV*LYY-----LCRAWAHLEHGKHLRALLIR 819
           ++ VSGFV NGLPEE LKLFNW R EG       Y      C     L+HG+ L A LI+
Sbjct: 381 MVMVSGFVHNGLPEEGLKLFNWMRFEGAKPCDYTYAGTISACAELGALKHGRQLHAQLIQ 440

Query: 820 HIQHGTLSIDK------VCKGWNSVMRNAIIVALGQLGHGNDPIK 936
           ++     +++       V    ++V  NA+I ALGQ GHG + I+
Sbjct: 441 NMYAKCGAVEDAHLVFLVMPNADAVSWNAMIAALGQHGHGTEAIQ 485


>ref|XP_020244606.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
           At1g25360-like [Asparagus officinalis]
          Length = 780

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
 Frame = +1

Query: 655 IINVSGFVRNGLPEEELKLFNWTRAEGV*TV*LYY-----LCRAWAHLEHGKHLRALLIR 819
           ++ VSGFV NGLPEE LKLFNW R EG       Y      C     L+HG+ L A LI+
Sbjct: 391 MVMVSGFVHNGLPEEGLKLFNWMRFEGAKPCDYTYAGTISACAELGALKHGRQLHAQLIQ 450

Query: 820 HIQHGTLSIDK------VCKGWNSVMRNAIIVALGQLGHGNDPIK 936
           ++     +++       V    ++V  NA+I ALGQ GHG + I+
Sbjct: 451 NMYAKCGAVEDAHLVFLVMPNADAVSWNAMIAALGQHGHGTEAIQ 495


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