BLASTX nr result

ID: Ophiopogon24_contig00004239 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00004239
         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064104.1| orf110b gene product (mitochondrion) [Beta vulg...    74   2e-14
gb|KJB09734.1| hypothetical protein B456_001G161000, partial [Go...    75   7e-14
ref|YP_173477.1| hypothetical protein NitaMp140 [Nicotiana tabac...    70   4e-13
gb|OIW15497.1| hypothetical protein TanjilG_32901 [Lupinus angus...    59   2e-08

>ref|NP_064104.1| orf110b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
 ref|YP_004222346.1| hypothetical protein BevumaM_p112 (mitochondrion) [Beta vulgaris
           subsp. maritima]
 ref|YP_004842151.1| hypothetical protein BemaM_p107 (mitochondrion) [Beta macrocarpa]
 dbj|BAA99498.1| orf110b (mitochondrion) [Beta vulgaris subsp. vulgaris]
 emb|CBJ14076.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBJ17566.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBJ20714.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
 emb|CBX24956.1| hypothetical protein (mitochondrion) [Beta macrocarpa]
 emb|CBL51962.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 110

 Score = 73.6 bits (179), Expect = 2e-14
 Identities = 36/49 (73%), Positives = 39/49 (79%)
 Frame = +1

Query: 1   PLRSGFEPLTQGFSVLCSNLLSYLNHFPKVSFLHL*APHQQWKSLLKNR 147
           PLRSGFEPLTQGFSVLCSN LSYLNHFPKV FLH  AP+  + S  K +
Sbjct: 45  PLRSGFEPLTQGFSVLCSNQLSYLNHFPKVCFLHRIAPYTFFLSQNKEK 93


>gb|KJB09734.1| hypothetical protein B456_001G161000, partial [Gossypium raimondii]
          Length = 244

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = +1

Query: 1   PLRSGFEPLTQGFSVLCSNLLSYLNHFPKVSFLHL*APH 117
           PLRSGFEPLTQGFSVLCSN LSYLNHFPKVSFLH  AP+
Sbjct: 101 PLRSGFEPLTQGFSVLCSNQLSYLNHFPKVSFLHRIAPY 139



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +3

Query: 252 TDVVLFCLPRDSIKKRFFLSRNLARPFHFRAGGNGIRT 365
           T++VLFC P DS K RFFLSRN A P  FRAGGNGIRT
Sbjct: 180 TEIVLFCPPGDSTK-RFFLSRNFACPLDFRAGGNGIRT 216


>ref|YP_173477.1| hypothetical protein NitaMp140 [Nicotiana tabacum]
 dbj|BAD83543.1| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 116

 Score = 70.5 bits (171), Expect = 4e-13
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +1

Query: 4   LRSGFEPLTQGFSVLCSNLLSYLNHFPKVSFLHL*APH 117
           LRSGFEPLTQGFSVLCSN LSYLNHFPKV FLH  AP+
Sbjct: 76  LRSGFEPLTQGFSVLCSNQLSYLNHFPKVCFLHRIAPY 113


>gb|OIW15497.1| hypothetical protein TanjilG_32901 [Lupinus angustifolius]
          Length = 153

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = -3

Query: 364 VRIPFPPARKWNGRAKLRERKNLF-LMESLGRQNSTT 257
           VRIPFP A+KWNGRAKLR+RKNL  L++SLG QNSTT
Sbjct: 117 VRIPFPSAQKWNGRAKLRDRKNLLVLVQSLGGQNSTT 153


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