BLASTX nr result

ID: Ophiopogon24_contig00004208 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00004208
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGN30962.1| chromoplast-specific carotenoid-associated protei...    69   5e-11
ref|XP_020265524.1| probable plastid-lipid-associated protein 2,...    68   2e-10

>gb|AGN30962.1| chromoplast-specific carotenoid-associated protein [Narcissus
           tazetta var. chinensis]
          Length = 316

 Score = 69.3 bits (168), Expect = 5e-11
 Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -2

Query: 221 MASSSSLNPFALKTLPT-PTIKPHRNLSFPATISTSSFPSKKFPTLSTELASSSFVPRAV 45
           MA SSS NP ALKTLP   T+K HRN S P      S P  K  TL+ +    SF+ RA 
Sbjct: 1   MACSSSFNPLALKTLPVHSTVKSHRNPSLPTPNLNFSSPLPKTLTLTIKTQQKSFLARAT 60

Query: 44  VDDDEWGKER 15
            DDDEWGKER
Sbjct: 61  TDDDEWGKER 70


>ref|XP_020265524.1| probable plastid-lipid-associated protein 2, chloroplastic
           [Asparagus officinalis]
 gb|ONK70264.1| uncharacterized protein A4U43_C05F31940 [Asparagus officinalis]
          Length = 324

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 43/76 (56%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
 Frame = -2

Query: 221 MASSSSLNPFALKTLP---TPT---IKPHRNLSFPATISTSSFPSKKFPTLSTELASSSF 60
           MA+SSS NPFALK+LP   TP+   +KP + L F    ST SFP  K  T    L SSS 
Sbjct: 1   MAASSSFNPFALKSLPKTQTPSSSSLKPQQRLLFSP--STLSFPPSKALTSKPSL-SSSL 57

Query: 59  VPRAVVDDDEWGKERE 12
           +PRA VDDDEWGKE E
Sbjct: 58  IPRAAVDDDEWGKEPE 73


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