BLASTX nr result

ID: Ophiopogon24_contig00004049 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00004049
         (1066 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258104.1| protein TIME FOR COFFEE-like [Asparagus offi...    96   1e-17
ref|XP_020259019.1| LOW QUALITY PROTEIN: protein TIME FOR COFFEE...    62   1e-06

>ref|XP_020258104.1| protein TIME FOR COFFEE-like [Asparagus officinalis]
 gb|ONK76420.1| uncharacterized protein A4U43_C03F27630 [Asparagus officinalis]
          Length = 1452

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 85/249 (34%), Positives = 100/249 (40%), Gaps = 12/249 (4%)
 Frame = -3

Query: 1055 FDFSAIVQNPALMQNLTEGAKHGYQIPXXXXXXXXXXXXXXQHKKGHYEEGKSGGDSXXX 876
            FD SAIVQNPAL+Q L + AKHG+QIP              QHKKGH E+GKSGGDS   
Sbjct: 1004 FDISAIVQNPALIQTLPDLAKHGFQIP-----AAAAATTAAQHKKGHNEDGKSGGDS--- 1055

Query: 875  XXXXXXXXXXXXXAVGGKNAGSV--------GGQHSLSFSRXXXXXXXXXXXTIL--AEH 726
                            GKNA S         G QHSLSF+R           +IL    H
Sbjct: 1056 ------GTPIANAVTEGKNATSATVGDGKNGGQQHSLSFARPDSEPTVPNFTSILGSGNH 1109

Query: 725  RMLNGVRPMI--XXXXXXXXXXXXXXXXXXXXXXXXXXXQMIXXXXXXXXXXXXXXXXXX 552
             +LNG RP+I                             QMI                  
Sbjct: 1110 LILNGGRPLIPPPSSAPSSTSAPSASVPPSSQQQQQQQQQMIQFQKQQQQRMIQLQQQLH 1169

Query: 551  XXXXXXQMSRPSKSSAAHTGSSNVTPDRLPAGSATMAARFPQGGLTGFPPSLIKGSSGGS 372
                     + + S A  + ++N T       S +MAARFPQG LTGFPPS+        
Sbjct: 1170 QHQQLQIQQQQNSSRAVKSSTANTT-TTANVSSPSMAARFPQGSLTGFPPSV-------- 1220

Query: 371  AQSPQWKTS 345
              SPQWK S
Sbjct: 1221 -HSPQWKAS 1228


>ref|XP_020259019.1| LOW QUALITY PROTEIN: protein TIME FOR COFFEE-like [Asparagus
            officinalis]
          Length = 1378

 Score = 62.0 bits (149), Expect = 1e-06
 Identities = 45/117 (38%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
 Frame = -3

Query: 1055 FDFSAIVQNPALMQNLTEGAKHGYQIPXXXXXXXXXXXXXXQHKKGHYEEGKSGGDSXXX 876
            FD SAIVQNPAL+Q L + AKHG+Q                QHKKGH E+GK GGD    
Sbjct: 1003 FDISAIVQNPALIQTLPDLAKHGFQ----------TAAVTAQHKKGHNEDGKYGGDPGTP 1052

Query: 875  XXXXXXXXXXXXXAVGGKNAGSVGGQHSLSFSRXXXXXXXXXXXTIL--AEHRMLNG 711
                         +  G      G QHSLSF+R           +IL    H +LNG
Sbjct: 1053 IANAVADGKNSTASAAGDGKNG-GQQHSLSFARPNNEPTVPNFTSILGGGNHLILNG 1108


Top