BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00004003
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243888.1| probable mediator of RNA polymerase II trans...    80   6e-15
gb|ONK78511.1| uncharacterized protein A4U43_C02F19550 [Asparagu...    57   5e-07
ref|XP_020254278.1| probable mediator of RNA polymerase II trans...    57   6e-07

>ref|XP_020243888.1| probable mediator of RNA polymerase II transcription subunit 26b
           [Asparagus officinalis]
 gb|ONK61485.1| uncharacterized protein A4U43_C08F30400 [Asparagus officinalis]
          Length = 486

 Score = 80.1 bits (196), Expect = 6e-15
 Identities = 43/114 (37%), Positives = 61/114 (53%)
 Frame = -1

Query: 381 LQKDSNLTRKSNGEVTRQDQQKDCNLVRKGNGELRSQEVPKARKPTDATHXXXXXXXXXX 202
           + +D N+T   + +  R+ ++K  NL +K N E+RSQE+P   KPT  T           
Sbjct: 269 MDEDGNITSNGDKKNGRKPREKSNNLTKKDNTEIRSQEIPGVPKPTYTTLKASKSKDIPS 328

Query: 201 XXXPERPSAKATACRNTEQRPKMQDNSGDLRRQEVAARAPKPINPPRMASKPQD 40
              P+R S K T C+N EQR +  ++S D+RRQE   R P P +     SKPQD
Sbjct: 329 PLIPKRSSPKDTTCKNIEQRQRTHEHSRDIRRQETGPRTPNPSDVVCKTSKPQD 382


>gb|ONK78511.1| uncharacterized protein A4U43_C02F19550 [Asparagus officinalis]
          Length = 468

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
 Frame = -1

Query: 381 LQKDSNLTRKSN-GEVTRQDQQKDCNLVRKGNGELRSQEVPKARKPTDATHXXXXXXXXX 205
           +  D N+T   N   V+R   +KD       N E+  QEVPKA KPTD TH         
Sbjct: 271 MDDDGNITSTGNKSNVSRPSVKKD-------NVEVTRQEVPKASKPTDTTHKAPKNKED- 322

Query: 204 XXXXPERPSAKATACRNTEQRPKMQDNSGDLRRQEVAARAPKPINPPRMASKPQD 40
                + P +++    NT++R K Q++S + R QE   R  KPI+     SKP +
Sbjct: 323 -----KHPVSES----NTQRRQKSQEHSREFRNQEAGFRVSKPIDASHKTSKPSE 368


>ref|XP_020254278.1| probable mediator of RNA polymerase II transcription subunit 26b
           [Asparagus officinalis]
          Length = 770

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
 Frame = -1

Query: 381 LQKDSNLTRKSN-GEVTRQDQQKDCNLVRKGNGELRSQEVPKARKPTDATHXXXXXXXXX 205
           +  D N+T   N   V+R   +KD       N E+  QEVPKA KPTD TH         
Sbjct: 271 MDDDGNITSTGNKSNVSRPSVKKD-------NVEVTRQEVPKASKPTDTTHKAPKNKED- 322

Query: 204 XXXXPERPSAKATACRNTEQRPKMQDNSGDLRRQEVAARAPKPINPPRMASKPQD 40
                + P +++    NT++R K Q++S + R QE   R  KPI+     SKP +
Sbjct: 323 -----KHPVSES----NTQRRQKSQEHSREFRNQEAGFRVSKPIDASHKTSKPSE 368



 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
 Frame = -1

Query: 381 LQKDSNLTRKSN-GEVTRQDQQKDCNLVRKGNGELRSQEVPKARKPTDATHXXXXXXXXX 205
           +  D N+T   N   V+R   +KD       N E+  QEVPKA KPTD TH         
Sbjct: 573 MDDDGNITSTGNKSNVSRPSVKKD-------NVEVTRQEVPKASKPTDTTHKAPKNKED- 624

Query: 204 XXXXPERPSAKATACRNTEQRPKMQDNSGDLRRQEVAARAPKPINPPRMASKPQD 40
                + P +++    NT++R K Q++S + R QE   R  KPI+     SKP +
Sbjct: 625 -----KHPVSES----NTQRRQKSQEHSREFRNQEAGFRVSKPIDASHKTSKPSE 670