BLASTX nr result

ID: Ophiopogon24_contig00003623 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00003623
         (1058 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK71061.1| uncharacterized protein A4U43_C04F4300 [Asparagus...    70   3e-09
ref|XP_020260144.1| nucleolar complex protein 4 homolog isoform ...    70   3e-09
ref|XP_020260143.1| nucleolar complex protein 4 homolog isoform ...    70   3e-09
ref|XP_020260142.1| nucleolar complex protein 4 homolog isoform ...    70   3e-09

>gb|ONK71061.1| uncharacterized protein A4U43_C04F4300 [Asparagus officinalis]
          Length = 578

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
 Frame = +1

Query: 784  TLKTLGYHFLLTLGYQLLSSRAHINNLLTL--------PLKFSRRPYLASVLRLVPAIT- 936
            T +TL    + TLG QLLSSRAHINNL TL        PLKFS    ++     VP +  
Sbjct: 22   TSETLTLKEVKTLGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNE 81

Query: 937  --SKSMADPSEDKDPKAVYKVWLRS 1005
              SK++ADPS++KDP+ VYK WLR+
Sbjct: 82   IPSKTLADPSKEKDPELVYKAWLRA 106


>ref|XP_020260144.1| nucleolar complex protein 4 homolog isoform X3 [Asparagus
            officinalis]
          Length = 628

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
 Frame = +1

Query: 784  TLKTLGYHFLLTLGYQLLSSRAHINNLLTL--------PLKFSRRPYLASVLRLVPAIT- 936
            T +TL    + TLG QLLSSRAHINNL TL        PLKFS    ++     VP +  
Sbjct: 22   TSETLTLKEVKTLGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNE 81

Query: 937  --SKSMADPSEDKDPKAVYKVWLRS 1005
              SK++ADPS++KDP+ VYK WLR+
Sbjct: 82   IPSKTLADPSKEKDPELVYKAWLRA 106


>ref|XP_020260143.1| nucleolar complex protein 4 homolog isoform X2 [Asparagus
            officinalis]
          Length = 628

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
 Frame = +1

Query: 784  TLKTLGYHFLLTLGYQLLSSRAHINNLLTL--------PLKFSRRPYLASVLRLVPAIT- 936
            T +TL    + TLG QLLSSRAHINNL TL        PLKFS    ++     VP +  
Sbjct: 22   TSETLTLKEVKTLGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNE 81

Query: 937  --SKSMADPSEDKDPKAVYKVWLRS 1005
              SK++ADPS++KDP+ VYK WLR+
Sbjct: 82   IPSKTLADPSKEKDPELVYKAWLRA 106


>ref|XP_020260142.1| nucleolar complex protein 4 homolog isoform X1 [Asparagus
            officinalis]
          Length = 629

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
 Frame = +1

Query: 784  TLKTLGYHFLLTLGYQLLSSRAHINNLLTL--------PLKFSRRPYLASVLRLVPAIT- 936
            T +TL    + TLG QLLSSRAHINNL TL        PLKFS    ++     VP +  
Sbjct: 22   TSETLTLKEVKTLGSQLLSSRAHINNLPTLLSVLSPSSPLKFSLEALISLQSFFVPLVNE 81

Query: 937  --SKSMADPSEDKDPKAVYKVWLRS 1005
              SK++ADPS++KDP+ VYK WLR+
Sbjct: 82   IPSKTLADPSKEKDPELVYKAWLRA 106


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