BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00003596
         (2310 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253057.1| LOW QUALITY PROTEIN: ribosomal RNA processin...    70   1e-08
ref|XP_022938030.1| ribosomal RNA-processing protein 1 homolog i...    61   5e-06
ref|XP_022938029.1| ribosomal RNA-processing protein 1 homolog i...    61   5e-06
ref|XP_022938028.1| ribosomal RNA processing protein 1 homolog B...    61   6e-06
ref|XP_022938027.1| ribosomal RNA processing protein 1 homolog i...    61   9e-06

>ref|XP_020253057.1| LOW QUALITY PROTEIN: ribosomal RNA processing protein 1 homolog
           [Asparagus officinalis]
          Length = 557

 Score = 70.1 bits (170), Expect = 1e-08
 Identities = 48/104 (46%), Positives = 61/104 (58%)
 Frame = -1

Query: 528 FAPINLMWLDKFYLLIRKFIHRFFALLKKNDWDVDLLNRVLVKKIKANVFEKLAQRGAEC 349
           F PI    LD   LL+R F+    ++L+ +       NRVLV KIK NVF++LA  G + 
Sbjct: 178 FLPIRTETLD---LLLRPFV----SVLESSS------NRVLVNKIKVNVFDRLAHNGVKF 224

Query: 348 LSGEWGGEAEKFGKYALVLGCLEKFSSFNAVAISILFQGMRRVL 217
           L+GE   E EKFGKYALVLG  EKF  F + +     QG R+VL
Sbjct: 225 LNGEKNEEVEKFGKYALVLGFSEKF--FKSASDEGTVQGNRKVL 266



 Score = 64.3 bits (155), Expect = 7e-07
 Identities = 29/42 (69%), Positives = 36/42 (85%)
 Frame = -1

Query: 531 QFAPINLMWLDKFYLLIRKFIHRFFALLKKNDWDVDLLNRVL 406
           +++ I+L+ LDKFYLLIRKFIHR F LLKKNDWD DLL R++
Sbjct: 103 EWSGIDLLRLDKFYLLIRKFIHRMFGLLKKNDWDSDLLERLV 144


>ref|XP_022938030.1| ribosomal RNA-processing protein 1 homolog isoform X4 [Cucurbita
           moschata]
          Length = 357

 Score = 60.8 bits (146), Expect = 5e-06
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -1

Query: 531 QFAPINLMWLDKFYLLIRKFIHRFFALLKKNDWDVDLLNRVLVKKIKANVF 379
           ++A I+ + LDKFYLLIR+F+H+FFALLKKN WD++L  R LV+ ++  VF
Sbjct: 101 EWAGIDALRLDKFYLLIRRFMHQFFALLKKNSWDLELCRR-LVQVLEERVF 150


>ref|XP_022938029.1| ribosomal RNA-processing protein 1 homolog isoform X3 [Cucurbita
           moschata]
          Length = 364

 Score = 60.8 bits (146), Expect = 5e-06
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -1

Query: 531 QFAPINLMWLDKFYLLIRKFIHRFFALLKKNDWDVDLLNRVLVKKIKANVF 379
           ++A I+ + LDKFYLLIR+F+H+FFALLKKN WD++L  R LV+ ++  VF
Sbjct: 101 EWAGIDALRLDKFYLLIRRFMHQFFALLKKNSWDLELCRR-LVQVLEERVF 150


>ref|XP_022938028.1| ribosomal RNA processing protein 1 homolog B isoform X2 [Cucurbita
           moschata]
          Length = 387

 Score = 60.8 bits (146), Expect = 6e-06
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -1

Query: 531 QFAPINLMWLDKFYLLIRKFIHRFFALLKKNDWDVDLLNRVLVKKIKANVF 379
           ++A I+ + LDKFYLLIR+F+H+FFALLKKN WD++L  R LV+ ++  VF
Sbjct: 101 EWAGIDALRLDKFYLLIRRFMHQFFALLKKNSWDLELCRR-LVQVLEERVF 150


>ref|XP_022938027.1| ribosomal RNA processing protein 1 homolog isoform X1 [Cucurbita
           moschata]
          Length = 555

 Score = 60.8 bits (146), Expect = 9e-06
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -1

Query: 531 QFAPINLMWLDKFYLLIRKFIHRFFALLKKNDWDVDLLNRVLVKKIKANVF 379
           ++A I+ + LDKFYLLIR+F+H+FFALLKKN WD++L  R LV+ ++  VF
Sbjct: 101 EWAGIDALRLDKFYLLIRRFMHQFFALLKKNSWDLELCRR-LVQVLEERVF 150