BLASTX nr result

ID: Ophiopogon24_contig00003556 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00003556
         (595 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON83705.1| Ovate protein family, C-terminal [Trema orientalis]     41   1e-06
gb|KZN01811.1| hypothetical protein DCAR_010565 [Daucus carota s...    47   7e-06
gb|OVA19935.1| Ovate protein family [Macleaya cordata]                 44   7e-06

>gb|PON83705.1| Ovate protein family, C-terminal [Trema orientalis]
          Length = 101

 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +3

Query: 462 LPDSKRSIMEMIPEVGACNWEDMEEL 539
           + D + SIMEMI EVGAC+W D+EEL
Sbjct: 46  ISDMRESIMEMIREVGACDWNDIEEL 71



 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = +2

Query: 377 ISFSAGLPGNVRGALAQSICAVKCSSDPFTGLQE 478
           IS SA LP  V G  A S C VKCS+DP + ++E
Sbjct: 18  ISLSASLPDGVCGVFAGSTCVVKCSTDPISDMRE 51


>gb|KZN01811.1| hypothetical protein DCAR_010565 [Daucus carota subsp. sativus]
          Length = 104

 Score = 46.6 bits (109), Expect(2) = 7e-06
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 377 ISFSAGLPGNVRGALAQSICAVKCSSDPFTGLQE 478
           ISFSA LP +VRG  A SICAVK SSDPF+ ++E
Sbjct: 22  ISFSACLPTDVRGIYADSICAVKYSSDPFSDIRE 55



 Score = 31.2 bits (69), Expect(2) = 7e-06
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 468 DSKRSIMEMIPEVGACNWEDMEEL 539
           D + S++EMI  VG  NW ++EEL
Sbjct: 52  DIRESVLEMIETVGVRNWNELEEL 75


>gb|OVA19935.1| Ovate protein family [Macleaya cordata]
          Length = 99

 Score = 43.9 bits (102), Expect(2) = 7e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +2

Query: 377 ISFSAGLPGNVRGALAQSICAVKCSSDPFTGLQ 475
           +SFSA LP +VRG  A SICAVK S+DP+  L+
Sbjct: 22  LSFSASLPNDVRGVYADSICAVKYSNDPYKDLK 54



 Score = 33.9 bits (76), Expect(2) = 7e-06
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +3

Query: 468 DSKRSIMEMIPEVGACNWEDMEEL 539
           D K SI+EMI +VG  +WE+MEEL
Sbjct: 52  DLKLSILEMIRDVGVRSWEEMEEL 75


Top