BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00002354
         (1667 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma fa...   493   e-167
gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus ...   484   e-166
ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,...   450   e-150
ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,...   447   e-149
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   432   e-143
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   429   e-142
gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]             425   e-140
gb|PON96872.1| RNA polymerase sigma factor [Trema orientalis]         425   e-140
ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,...   424   e-140
ref|XP_016649816.1| PREDICTED: RNA polymerase sigma factor sigE,...   423   e-140
ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplas...   421   e-139
ref|XP_007219010.1| RNA polymerase sigma factor sigE, chloroplas...   421   e-139
ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,...   421   e-138
gb|PON50098.1| RNA polymerase sigma factor [Parasponia andersonii]    421   e-138
ref|XP_018505629.1| PREDICTED: RNA polymerase sigma factor sigE,...   421   e-138
gb|OAY85601.1| RNA polymerase sigma factor sigE, chloroplastic/m...   419   e-138
ref|XP_010097858.1| RNA polymerase sigma factor sigE, chloroplas...   419   e-138
ref|XP_020099399.1| RNA polymerase sigma factor sigE, chloroplas...   412   e-138
gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica gran...   419   e-138
ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,...   419   e-138

>ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Asparagus officinalis]
          Length = 478

 Score =  493 bits (1268), Expect = e-167
 Identities = 263/324 (81%), Positives = 278/324 (85%), Gaps = 2/324 (0%)
 Frame = -2

Query: 967  RRLSLDKRVE--RKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMK 794
            +RL L+KRVE  RKRS +GEI GG  KK               YSVS TD+ SLDWR++K
Sbjct: 122  KRLGLEKRVEAMRKRSREGEIGGGSSKKEEEEEIDRLVRE---YSVS-TDLGSLDWRRVK 177

Query: 793  IPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKV 614
            IPPVL S+E  RLFKLMQPMKAI EVKENLH DLNKEPTEGELAAAVNMTV +LR+HI+V
Sbjct: 178  IPPVLGSAEHTRLFKLMQPMKAISEVKENLHKDLNKEPTEGELAAAVNMTVSELRKHIEV 237

Query: 613  GQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLS 434
            GQAARNKLI HNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFE KRGFRLS
Sbjct: 238  GQAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLS 297

Query: 433  TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGI 254
            TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLEL+ EL RLPTEEEII+RVGI
Sbjct: 298  TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELIIELNRLPTEEEIIARVGI 357

Query: 253  SPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXX 74
            SPERYHDVM+ASKSV+SLNSRHVVTQEEFINAITD+DGVGGDKRRQPA            
Sbjct: 358  SPERYHDVMRASKSVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDDVLDS 417

Query: 73   LKPKESLVIRQRYGLDGKGDRTLG 2
            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 418  LKPKESLVIRQRYGLDGKGDRTLG 441


>gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus officinalis]
          Length = 346

 Score =  484 bits (1245), Expect = e-166
 Identities = 256/312 (82%), Positives = 269/312 (86%)
 Frame = -2

Query: 937 RKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKIPPVLSSSEQAR 758
           RKRS +GEI GG  KK               YSVS TD+ SLDWR++KIPPVL S+E  R
Sbjct: 2   RKRSREGEIGGGSSKKEEEEEIDRLVRE---YSVS-TDLGSLDWRRVKIPPVLGSAEHTR 57

Query: 757 LFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQAARNKLIMHN 578
           LFKLMQPMKAI EVKENLH DLNKEPTEGELAAAVNMTV +LR+HI+VGQAARNKLI HN
Sbjct: 58  LFKLMQPMKAISEVKENLHKDLNKEPTEGELAAAVNMTVSELRKHIEVGQAARNKLIKHN 117

Query: 577 LRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTYGLFWIRHSII 398
           LRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFE KRGFRLSTYGLFWIRHSII
Sbjct: 118 LRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSII 177

Query: 397 RSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGISPERYHDVMKAS 218
           RSMTTSSFTRVSFGIESVRQEIQKAKLEL+ EL RLPTEEEII+RVGISPERYHDVM+AS
Sbjct: 178 RSMTTSSFTRVSFGIESVRQEIQKAKLELIIELNRLPTEEEIIARVGISPERYHDVMRAS 237

Query: 217 KSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQR 38
           KSV+SLNSRHVVTQEEFINAITD+DGVGGDKRRQPA            LKPKESLVIRQR
Sbjct: 238 KSVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQR 297

Query: 37  YGLDGKGDRTLG 2
           YGLDGKGDRTLG
Sbjct: 298 YGLDGKGDRTLG 309


>ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Elaeis guineensis]
 ref|XP_010913942.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Elaeis guineensis]
          Length = 498

 Score =  450 bits (1157), Expect = e-150
 Identities = 239/322 (74%), Positives = 261/322 (81%)
 Frame = -2

Query: 967  RRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKIP 788
            RRLSL+KR+  +R  D E+     +               EYSVS TD+ SLDW+KMKIP
Sbjct: 141  RRLSLEKRIALRRRKDEEVEMVAARDERRDLDEDVGKLLREYSVS-TDLASLDWKKMKIP 199

Query: 787  PVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQ 608
            PVLSS+E   LF+LMQPMKAIFEVK NL+ DLN+EPT+ ELAAAVNMTVPQLRRHI+VG+
Sbjct: 200  PVLSSAEHNWLFELMQPMKAIFEVKHNLNKDLNREPTDAELAAAVNMTVPQLRRHIEVGR 259

Query: 607  AARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTY 428
            AARNKLI HNLRLVLFVINKYY EIASG KFQDLCQAGVKGLITAIDRFE KRGFRLSTY
Sbjct: 260  AARNKLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKGLITAIDRFEAKRGFRLSTY 319

Query: 427  GLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGISP 248
            GLFWIRHSIIRSMT SSFTRV FGIESVRQEIQKAKLEL  EL R+P +EEII RV ISP
Sbjct: 320  GLFWIRHSIIRSMTISSFTRVPFGIESVRQEIQKAKLELQFELGRVPKDEEIIDRVKISP 379

Query: 247  ERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXLK 68
            ERY+DVMKA+K ++SL++RH VTQEEFIN ITDIDGVGGDKRRQ A            LK
Sbjct: 380  ERYYDVMKAAKPIFSLHARHAVTQEEFINGITDIDGVGGDKRRQRALLRLALDDVLDSLK 439

Query: 67   PKESLVIRQRYGLDGKGDRTLG 2
            PKESLVIRQRYGLDGKGDRTLG
Sbjct: 440  PKESLVIRQRYGLDGKGDRTLG 461



 Score = 60.5 bits (145), Expect = 6e-06
 Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = -1

Query: 1313 ASFPMLRSKRHRSRPGSIVAFKTDRT-KCSAVAATTSHEPATIPLQQPPKEXXXXXXXXX 1137
            A F   RS   R RP   +AF+TDR  KCSA A ++    A  P Q+PPK          
Sbjct: 19   ARFSARRSPAFR-RPFFCLAFRTDRAAKCSAAAVSSE---AVKPPQKPPKRAQATSVDAA 74

Query: 1136 XXXXXXXXXKADAELDYNEVAAALENIYKLSPAADVADAE 1017
                      A  +LDYNEVAAALENIYKLSP A+V+D E
Sbjct: 75   PT--------ATQDLDYNEVAAALENIYKLSP-AEVSDVE 105


>ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Phoenix dactylifera]
          Length = 498

 Score =  447 bits (1151), Expect = e-149
 Identities = 236/322 (73%), Positives = 258/322 (80%)
 Frame = -2

Query: 967  RRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKIP 788
            RRLSL+KR+  +R  D E+     +               EYSVS TD+ SLDW+KMKIP
Sbjct: 141  RRLSLEKRIASRRRKDEEVEAAAARDERRDLDEDGEKLLREYSVS-TDLASLDWKKMKIP 199

Query: 787  PVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQ 608
            PVLSS+E  RLF+LMQPMKAIFEVK+NL  DLN+EPT+ ELA AVNMTVP+LRRHI+VGQ
Sbjct: 200  PVLSSAEHNRLFELMQPMKAIFEVKKNLDKDLNREPTDAELAVAVNMTVPRLRRHIEVGQ 259

Query: 607  AARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTY 428
            AARN LI HNLRLVLFVINKYY EIASG KFQDLCQAGVKGLITAIDRFE KRGFRLSTY
Sbjct: 260  AARNMLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKGLITAIDRFEPKRGFRLSTY 319

Query: 427  GLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGISP 248
            GLFWIRHSI RSMT SSFTRV FGIESVRQEIQKAKLEL  EL RLP +EEII RV ISP
Sbjct: 320  GLFWIRHSITRSMTVSSFTRVPFGIESVRQEIQKAKLELQFELGRLPKDEEIIDRVKISP 379

Query: 247  ERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXLK 68
            ERYHDVMKA+K ++SL++RH VTQEEFI+ ITD+DGVGGDK RQ A            LK
Sbjct: 380  ERYHDVMKAAKPIFSLHARHAVTQEEFIDGITDMDGVGGDKHRQRALLRLALDDVLDSLK 439

Query: 67   PKESLVIRQRYGLDGKGDRTLG 2
            PKESLVIRQRYGLDGKGDRTLG
Sbjct: 440  PKESLVIRQRYGLDGKGDRTLG 461


>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  432 bits (1112), Expect = e-143
 Identities = 228/323 (70%), Positives = 265/323 (82%), Gaps = 1/323 (0%)
 Frame = -2

Query: 967  RRLSLDKRVE-RKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKI 791
            +RLSLD+R+  R++  +G ++   +K+              EYSVS TD+ SLDW+KMKI
Sbjct: 156  KRLSLDRRIALRRKKEEGAVQLSGVKE-GSKEDGDVDKLVGEYSVS-TDLASLDWKKMKI 213

Query: 790  PPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVG 611
            PPVL SSE A LFKLMQPM A+F++KENLH DL +EPT+GELA + NM+V Q+RR I+VG
Sbjct: 214  PPVLPSSEHAWLFKLMQPMNALFQMKENLHRDLGREPTDGELADSTNMSVFQVRRCIEVG 273

Query: 610  QAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLST 431
            +AARN+LI HNLRLVLFVINKY+QE A+G KFQDLCQAGVKGLITAIDRFE KR FRLST
Sbjct: 274  RAARNRLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRRFRLST 333

Query: 430  YGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGIS 251
            YGLFWIRH+I+RSMT SSFTRVSFG+ESVR EIQ+AKLELM EL+RLPTEEEII +VGIS
Sbjct: 334  YGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELMFELERLPTEEEIIKKVGIS 393

Query: 250  PERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXL 71
            PERYH+V+KASK V+SL+SRH +TQEEFIN ITDI+GVGGDKRRQPA            L
Sbjct: 394  PERYHEVIKASKPVFSLHSRHAITQEEFINGITDIEGVGGDKRRQPALLRLALDDVLDSL 453

Query: 70   KPKESLVIRQRYGLDGKGDRTLG 2
            KPKESLVIRQRYGLDGKGDRTLG
Sbjct: 454  KPKESLVIRQRYGLDGKGDRTLG 476


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
          Length = 520

 Score =  429 bits (1104), Expect = e-142
 Identities = 222/324 (68%), Positives = 257/324 (79%), Gaps = 1/324 (0%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVS-STDVVSLDWRKMK 794
            A+RLSLDKRV  K + D ++    ++K                  S STD+VSLDW+KM+
Sbjct: 159  AKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMR 218

Query: 793  IPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKV 614
            IPPVLSSSE   LFKLMQPMK + EVKE L  DL +EP +GELA A NMTV Q++RH++V
Sbjct: 219  IPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEV 278

Query: 613  GQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLS 434
            G+AARNKLI HNLRLVLFVINKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE +R FRLS
Sbjct: 279  GRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLS 338

Query: 433  TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGI 254
            TYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE++ +L+R+PTE+EII +VGI
Sbjct: 339  TYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGI 398

Query: 253  SPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXX 74
            SPERYH+VM+ASK V+SLNSRH VTQEEFIN ITD+DGV GD RR+PA            
Sbjct: 399  SPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDS 458

Query: 73   LKPKESLVIRQRYGLDGKGDRTLG 2
            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 459  LKPKESLVIRQRYGLDGKGDRTLG 482


>gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]
          Length = 513

 Score =  425 bits (1093), Expect = e-140
 Identities = 225/333 (67%), Positives = 261/333 (78%), Gaps = 11/333 (3%)
 Frame = -2

Query: 967  RRLSLDKRVERKRSM-----------DGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDV 821
            +RL LD+R+  +R             DG+++GG                  EYSVS TD+
Sbjct: 154  KRLGLDERIAVRRKEKEEITLSQGKEDGKMKGG----------DDVERLVREYSVS-TDL 202

Query: 820  VSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTV 641
            VSLDW+KMKIP VL SSE   LFKLMQPMK + +VKENLH D N+EPT+GELAAA NM+V
Sbjct: 203  VSLDWKKMKIPSVLPSSEHTWLFKLMQPMKVLLQVKENLHKDFNREPTDGELAAATNMSV 262

Query: 640  PQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRF 461
             Q++RHI+VGQAARNKLI HNLRLVLFVINKY+Q+ A+G ++QDLCQAGVKGLITAIDRF
Sbjct: 263  IQVKRHIEVGQAARNKLIKHNLRLVLFVINKYFQDFANGPRYQDLCQAGVKGLITAIDRF 322

Query: 460  ELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTE 281
            E +R  RLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQ+AKL+LM EL+R PTE
Sbjct: 323  EPQRKLRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLDLMFELEREPTE 382

Query: 280  EEIISRVGISPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXX 101
            EEII +VGISPERYH+VM+ASK V+SL++RH+ TQEEFIN ITD+DGVGGDKRRQPA   
Sbjct: 383  EEIIEKVGISPERYHEVMRASKPVFSLHARHLTTQEEFINGITDVDGVGGDKRRQPALLR 442

Query: 100  XXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLG 2
                     LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 443  LALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 475


>gb|PON96872.1| RNA polymerase sigma factor [Trema orientalis]
          Length = 539

 Score =  425 bits (1093), Expect = e-140
 Identities = 230/347 (66%), Positives = 264/347 (76%), Gaps = 24/347 (6%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDG----------------------EIRGGFI--KKHXXXXXXXX 863
            A+RLSLDKR+  KR+ +                       E R   +  KK         
Sbjct: 156  AKRLSLDKRIALKRNKEDKESVSIRKSKDSENEKNEKNEKEKRVVLVRKKKDSENENEKI 215

Query: 862  XXXXXEYSVSSTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKE 683
                 EYS +STD++SLDW+KMKIPPVL SSE   LFKLMQP K + +VK+NL NDL +E
Sbjct: 216  DKLVREYS-ASTDLISLDWKKMKIPPVLPSSEHTWLFKLMQPFKELRQVKDNLQNDLGRE 274

Query: 682  PTEGELAAAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLC 503
            PTEGELA A NM+V Q+++H++VG+AARNKLI HNLRLVLFV+NKY+Q+ A+G KFQDLC
Sbjct: 275  PTEGELAKATNMSVAQVKKHLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLC 334

Query: 502  QAGVKGLITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKA 323
            QAGVKGLITAIDRFE KR FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKA
Sbjct: 335  QAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKA 394

Query: 322  KLELMCELQRLPTEEEIISRVGISPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDID 143
            KLELM EL+RLPTE+EII +VGISPERYHDVM+ASK VYSL+S+H VTQEEFINAITDI+
Sbjct: 395  KLELMFELKRLPTEDEIIEKVGISPERYHDVMRASKPVYSLHSKHAVTQEEFINAITDIE 454

Query: 142  GVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLG 2
            GVGGD RR+PA            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 455  GVGGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 501


>ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 515

 Score =  424 bits (1090), Expect = e-140
 Identities = 218/323 (67%), Positives = 258/323 (79%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKI 791
            A+RL+LDKRVE K++   E+     K+                  +STD+VSLDW+KMKI
Sbjct: 155  AKRLNLDKRVELKKNKVDEVNACVRKRKESISENDNIENLVREYSASTDLVSLDWKKMKI 214

Query: 790  PPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVG 611
            PPVL S+E A LFKLMQP+KA+ +V ENL   L ++PTEGELA A NM++ Q++RH++VG
Sbjct: 215  PPVLPSTEHAWLFKLMQPLKALLQVNENLKQSLGRKPTEGELAEATNMSIAQVKRHLEVG 274

Query: 610  QAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLST 431
            +AARNKLI HNLRLVLFVINKY+Q+ A+G +FQDLCQAGVKGLITAIDRFE KR FRLST
Sbjct: 275  RAARNKLIKHNLRLVLFVINKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLST 334

Query: 430  YGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGIS 251
            YGLFWIRH+IIRSMT SSF RVSFG+ESVR EIQKAKLELM EL+RLPTEEEII +VGIS
Sbjct: 335  YGLFWIRHAIIRSMTLSSFQRVSFGLESVRAEIQKAKLELMFELKRLPTEEEIIEKVGIS 394

Query: 250  PERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXL 71
            PERY++VM+ASK+V+SL+SRH VTQEEFI+ ITD++GV GD RRQPA            L
Sbjct: 395  PERYNEVMRASKAVFSLHSRHAVTQEEFIDGITDVEGVEGDNRRQPALLRLALDDVLDSL 454

Query: 70   KPKESLVIRQRYGLDGKGDRTLG 2
            KPKESLVIRQRYGLDG+GDRTLG
Sbjct: 455  KPKESLVIRQRYGLDGRGDRTLG 477


>ref|XP_016649816.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Prunus mume]
          Length = 500

 Score =  423 bits (1088), Expect = e-140
 Identities = 218/324 (67%), Positives = 256/324 (79%), Gaps = 1/324 (0%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVS-STDVVSLDWRKMK 794
            A+RLSLDKRV  K + D ++    ++K                  S STD+VSLDW+KMK
Sbjct: 139  AKRLSLDKRVTLKWNKDEKVIASIVRKRKSRKNENEKIEELVREYSASTDLVSLDWKKMK 198

Query: 793  IPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKV 614
            IPPVL+SSE A LFKLMQPMK + EVKENL  DL +EPT GELA A NM+V Q+++H++V
Sbjct: 199  IPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEV 258

Query: 613  GQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLS 434
            G+AAR+KLI HNLRLVLFV+NKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE KR FRLS
Sbjct: 259  GRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLS 318

Query: 433  TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGI 254
            TYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKL ++  L+R+PTE+EII +VGI
Sbjct: 319  TYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGI 378

Query: 253  SPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXX 74
            SPERYH+VM+ASK V+SL+SRH  TQEEFIN ITD+DGV GD R++PA            
Sbjct: 379  SPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDS 438

Query: 73   LKPKESLVIRQRYGLDGKGDRTLG 2
            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 439  LKPKESLVIRQRYGLDGKGDRTLG 462


>ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 ref|XP_024176964.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 ref|XP_024176971.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 ref|XP_024176977.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 gb|PRQ60343.1| putative RNA polymerase sigma-70 like domain-containing protein [Rosa
            chinensis]
          Length = 519

 Score =  421 bits (1083), Expect = e-139
 Identities = 217/324 (66%), Positives = 258/324 (79%), Gaps = 1/324 (0%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVS-STDVVSLDWRKMK 794
            A+RLSLDKRV  K + D ++    ++K                  S STD+VSLDW+KM+
Sbjct: 158  AKRLSLDKRVALKWNKDEKVAAPVVRKRKDRKSENQMIEELVREYSASTDLVSLDWKKMR 217

Query: 793  IPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKV 614
            IPPVL+SSE   LFKLMQPMKA+ +VKE L  DL +EP +GELA A + +V Q+++H++V
Sbjct: 218  IPPVLTSSEHTWLFKLMQPMKALLQVKETLQKDLGREPNKGELAEATSTSVVQVKKHLEV 277

Query: 613  GQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLS 434
            G+AARNKLI HNLRLVLFVINKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE +R FRLS
Sbjct: 278  GRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLS 337

Query: 433  TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGI 254
            TYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE++ +L+R+PTE+EII +VGI
Sbjct: 338  TYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGI 397

Query: 253  SPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXX 74
            SPERYH+VM+ASK V+SL+SRH VTQEEFINAITD+DGV GD RR+PA            
Sbjct: 398  SPERYHEVMRASKPVFSLHSRHSVTQEEFINAITDVDGVEGDNRRKPALLRLAIDDVLDS 457

Query: 73   LKPKESLVIRQRYGLDGKGDRTLG 2
            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 458  LKPKESLVIRQRYGLDGKGDRTLG 481


>ref|XP_007219010.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Prunus
            persica]
 gb|ONI25507.1| hypothetical protein PRUPE_2G307500 [Prunus persica]
          Length = 519

 Score =  421 bits (1083), Expect = e-139
 Identities = 217/324 (66%), Positives = 256/324 (79%), Gaps = 1/324 (0%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVS-STDVVSLDWRKMK 794
            A+RLSL+KRV  K + D ++    ++K                  S STD+VSLDW+KMK
Sbjct: 158  AKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMK 217

Query: 793  IPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKV 614
            IPPVL+SSE A LFKLMQPMK + EVKENL  DL +EPT GELA A NM+V Q+++H++V
Sbjct: 218  IPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEV 277

Query: 613  GQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLS 434
            G+AAR+KLI HNLRLVLFV+NKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE KR FRLS
Sbjct: 278  GRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLS 337

Query: 433  TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGI 254
            TYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKL ++  L+R+PTE+EII +VGI
Sbjct: 338  TYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGI 397

Query: 253  SPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXX 74
            SPERYH+VM+ASK V+SL+SRH  TQEEFIN ITD+DGV GD R++PA            
Sbjct: 398  SPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDS 457

Query: 73   LKPKESLVIRQRYGLDGKGDRTLG 2
            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 458  LKPKESLVIRQRYGLDGKGDRTLG 481


>ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Pyrus x
            bretschneideri]
          Length = 519

 Score =  421 bits (1081), Expect = e-138
 Identities = 217/323 (67%), Positives = 252/323 (78%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKI 791
            A+RL+LDKRV  K + D ++     K+                  +STD+VSLDW+KMKI
Sbjct: 159  AKRLNLDKRVALKWNKDEKVVSSVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKI 218

Query: 790  PPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVG 611
            PPVL+SSE A LFKLMQPMK + EV+E L  DL  EPT GELA A NM+V Q+++H +VG
Sbjct: 219  PPVLTSSEHAWLFKLMQPMKGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVG 278

Query: 610  QAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLST 431
            +AARNKLI HNLRLVLFVINKY+Q+ A+G KFQDLCQAGV+GLITAIDRFE KR FRLST
Sbjct: 279  RAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLST 338

Query: 430  YGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGIS 251
            YGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE+M  L+R+PT+EEII +VGIS
Sbjct: 339  YGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKVGIS 398

Query: 250  PERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXL 71
            PERYH+VM+ASK V SL+SRH  TQEE+IN ITD+DGV GD RR+PA            L
Sbjct: 399  PERYHEVMRASKPVSSLHSRHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSL 458

Query: 70   KPKESLVIRQRYGLDGKGDRTLG 2
            KPKESLVIRQRYGLDGKGDRTLG
Sbjct: 459  KPKESLVIRQRYGLDGKGDRTLG 481


>gb|PON50098.1| RNA polymerase sigma factor [Parasponia andersonii]
          Length = 536

 Score =  421 bits (1082), Expect = e-138
 Identities = 225/344 (65%), Positives = 264/344 (76%), Gaps = 21/344 (6%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDG-------------------EIRGGFI--KKHXXXXXXXXXXX 854
            A+RLSLDKR+  KR+ +                    E R   +  KK            
Sbjct: 156  AKRLSLDKRITLKRNKEDRESVSNRKSKDSENEKNEKEKRVVLVRKKKDSKNENEEIDKL 215

Query: 853  XXEYSVSSTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTE 674
              EYS +STD+VSLDW+KMKIPPVL SSE   LFKLMQP+K + +VKENL NDL +EPT+
Sbjct: 216  VREYS-ASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKELRQVKENLQNDLGREPTD 274

Query: 673  GELAAAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAG 494
            GE+A A NM+V Q+++H++VG+AARNKLI HNLRLVLFV+NKY+Q+ A+G KFQDLCQAG
Sbjct: 275  GEVAKATNMSVAQVKKHLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAG 334

Query: 493  VKGLITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLE 314
            V+GLITAIDRFE KR FRLSTYG+FWIRH++IRSMT SSFTRVSFG+ESVR EIQKAKLE
Sbjct: 335  VRGLITAIDRFEPKRRFRLSTYGVFWIRHAVIRSMTVSSFTRVSFGLESVRVEIQKAKLE 394

Query: 313  LMCELQRLPTEEEIISRVGISPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVG 134
            LM EL+RLPTE+EII +V ISPERYHDVM+ASK VYSL+S+H VTQEEFINAITD++GVG
Sbjct: 395  LMFELKRLPTEDEIIEKVSISPERYHDVMRASKPVYSLHSKHAVTQEEFINAITDVEGVG 454

Query: 133  GDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLG 2
            GD RR+PA            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 455  GDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 498


>ref|XP_018505629.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Pyrus x
            bretschneideri]
          Length = 544

 Score =  421 bits (1081), Expect = e-138
 Identities = 217/323 (67%), Positives = 252/323 (78%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKI 791
            A+RL+LDKRV  K + D ++     K+                  +STD+VSLDW+KMKI
Sbjct: 184  AKRLNLDKRVALKWNKDEKVVSSVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKI 243

Query: 790  PPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVG 611
            PPVL+SSE A LFKLMQPMK + EV+E L  DL  EPT GELA A NM+V Q+++H +VG
Sbjct: 244  PPVLTSSEHAWLFKLMQPMKGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVG 303

Query: 610  QAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLST 431
            +AARNKLI HNLRLVLFVINKY+Q+ A+G KFQDLCQAGV+GLITAIDRFE KR FRLST
Sbjct: 304  RAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLST 363

Query: 430  YGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGIS 251
            YGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE+M  L+R+PT+EEII +VGIS
Sbjct: 364  YGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKVGIS 423

Query: 250  PERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXL 71
            PERYH+VM+ASK V SL+SRH  TQEE+IN ITD+DGV GD RR+PA            L
Sbjct: 424  PERYHEVMRASKPVSSLHSRHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSL 483

Query: 70   KPKESLVIRQRYGLDGKGDRTLG 2
            KPKESLVIRQRYGLDGKGDRTLG
Sbjct: 484  KPKESLVIRQRYGLDGKGDRTLG 506


>gb|OAY85601.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial,
            partial [Ananas comosus]
          Length = 513

 Score =  419 bits (1078), Expect = e-138
 Identities = 221/326 (67%), Positives = 259/326 (79%), Gaps = 3/326 (0%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSM-DGEIR--GGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRK 800
            A+RLSL+KRV  +R   +GE R  GG +++                + +S D+  LDWR+
Sbjct: 163  AKRLSLEKRVALRRGKGEGERREHGGDVEELVRD------------NSASMDLARLDWRR 210

Query: 799  MKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHI 620
            M+IPPVL S+E +RLF+LMQPMK I+E+KE+LH DL +EPT+ E+AAA+NM V +LR+H+
Sbjct: 211  MRIPPVLGSAEHSRLFELMQPMKVIYEMKESLHKDLLREPTDSEMAAAMNMRVSRLRQHV 270

Query: 619  KVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFR 440
            +VG+AARNKLI HNLRLVLFVINKY+ EIASG KFQDLCQAGVKGLITAIDRFE KRGFR
Sbjct: 271  EVGRAARNKLIKHNLRLVLFVINKYFPEIASGQKFQDLCQAGVKGLITAIDRFEQKRGFR 330

Query: 439  LSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRV 260
            LSTYGLFWIRHSIIRSMT SSFT+V FGIES+RQEIQKAKL+L  EL+R PTEEEII RV
Sbjct: 331  LSTYGLFWIRHSIIRSMTLSSFTKVPFGIESIRQEIQKAKLKLSFELERSPTEEEIIGRV 390

Query: 259  GISPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXX 80
            G+SPERY+D++KASK V SLNSRH VTQEEFI  ITDIDG+ GDKRR  A          
Sbjct: 391  GVSPERYNDIIKASKPVISLNSRHAVTQEEFIKGITDIDGISGDKRRHAALLRLALDDVL 450

Query: 79   XXLKPKESLVIRQRYGLDGKGDRTLG 2
              LKPKESLVIRQRYGLDGKG+RTLG
Sbjct: 451  DSLKPKESLVIRQRYGLDGKGNRTLG 476


>ref|XP_010097858.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Morus
            notabilis]
 gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  419 bits (1078), Expect = e-138
 Identities = 219/324 (67%), Positives = 252/324 (77%), Gaps = 1/324 (0%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVS-STDVVSLDWRKMK 794
            A+RLSL KRVE KR  +  +    ++K                  S STD+VSLDW+KMK
Sbjct: 156  AKRLSLHKRVELKRDKEENVAVVLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMK 215

Query: 793  IPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKV 614
            IPPVL SSE   LFKLMQP+K +F+V E+L   L +EPTE ELA A N++V Q++RH++ 
Sbjct: 216  IPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGREPTENELAEATNISVVQVKRHLEA 275

Query: 613  GQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLS 434
            G+AARNKLI HNLRLVLFV+NKY+Q+  +G KFQDLCQAGV+GLITAIDRFE KR FRLS
Sbjct: 276  GRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLS 335

Query: 433  TYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGI 254
            TYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAK+EL  EL+RLPTEEEII +VGI
Sbjct: 336  TYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKIELTFELKRLPTEEEIIEKVGI 395

Query: 253  SPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXX 74
            SPERYH+VM+ASK V SLNSRHV TQEEFINAITD+DGV GD RR+PA            
Sbjct: 396  SPERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDGVDGDDRRKPALLRLALDDVLDS 455

Query: 73   LKPKESLVIRQRYGLDGKGDRTLG 2
            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 456  LKPKESLVIRQRYGLDGKGDRTLG 479


>ref|XP_020099399.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           isoform X1 [Ananas comosus]
          Length = 313

 Score =  412 bits (1058), Expect = e-138
 Identities = 206/275 (74%), Positives = 235/275 (85%)
 Frame = -2

Query: 826 DVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNM 647
           D+  LDWR+M+IPPVL S+E +RLF+LMQPMK I+E+KE+LH DL +EPT+ E+AAA+NM
Sbjct: 2   DLACLDWRRMRIPPVLGSAEHSRLFELMQPMKVIYEMKESLHKDLLREPTDSEMAAAMNM 61

Query: 646 TVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAID 467
            V +LR+H++VG+AARNKLI HNLRLVLFVINKY+ EIASG KFQDLCQAGVKGLITAID
Sbjct: 62  RVSRLRQHVEVGRAARNKLIKHNLRLVLFVINKYFPEIASGQKFQDLCQAGVKGLITAID 121

Query: 466 RFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLP 287
           RFE KRGFRLSTYGLFWIRHSIIRSMT SSFT+V FGIES+RQEIQKAKL+L  EL+R P
Sbjct: 122 RFEQKRGFRLSTYGLFWIRHSIIRSMTLSSFTKVPFGIESIRQEIQKAKLKLSFELERSP 181

Query: 286 TEEEIISRVGISPERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAX 107
           TEEEII RVG+SPERY+D++KASK V SLNSRH VTQEEFI  ITDIDG+ GDKRR  A 
Sbjct: 182 TEEEIIGRVGVSPERYNDIIKASKPVISLNSRHAVTQEEFIKGITDIDGISGDKRRHAAL 241

Query: 106 XXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLG 2
                      LKPKESLVIRQRYGLDGKG+RTLG
Sbjct: 242 LRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLG 276


>gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica granatum]
 gb|PKI72417.1| hypothetical protein CRG98_007163 [Punica granatum]
          Length = 514

 Score =  419 bits (1077), Expect = e-138
 Identities = 217/323 (67%), Positives = 252/323 (78%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKI 791
            A+RLSLD+R+  K + D +      KK                  +STD+VSLDW+KMKI
Sbjct: 154  AKRLSLDRRIALKNNKDEKPVASEQKKKDVKSEDEKIERLVRDYSASTDLVSLDWKKMKI 213

Query: 790  PPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVG 611
            PPVL S+E A LFKLMQPMKA+FEV+ENL   L ++P + ELA A  MTV Q+R+H++VG
Sbjct: 214  PPVLPSTEHAWLFKLMQPMKALFEVRENLRAGLGRQPADAELADATKMTVAQVRKHLEVG 273

Query: 610  QAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLST 431
            +AARNKLI HNLRLVLFVINKY+Q+ A+G +FQDLCQAGVKGLI AIDRFE  R  RLST
Sbjct: 274  RAARNKLIKHNLRLVLFVINKYFQDFANGSRFQDLCQAGVKGLIAAIDRFEPNRKLRLST 333

Query: 430  YGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGIS 251
            Y LFWIRH+IIRSMT SSFTRVSFG+ESVR EIQ+AKLEL+ EL R+PTE+EII RVG+S
Sbjct: 334  YSLFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQRAKLELLFELNRMPTEDEIIERVGMS 393

Query: 250  PERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXL 71
            PERYH+VM+ASK VYSL+SRH VTQEEFI+AITD+DGVGGD RRQPA            L
Sbjct: 394  PERYHEVMRASKPVYSLHSRHAVTQEEFISAITDVDGVGGDNRRQPALLRLALDDVLDSL 453

Query: 70   KPKESLVIRQRYGLDGKGDRTLG 2
            KPKESLVIRQRYGLDGKGDRTLG
Sbjct: 454  KPKESLVIRQRYGLDGKGDRTLG 476


>ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Pyrus x
            bretschneideri]
          Length = 519

 Score =  419 bits (1077), Expect = e-138
 Identities = 216/323 (66%), Positives = 252/323 (78%)
 Frame = -2

Query: 970  ARRLSLDKRVERKRSMDGEIRGGFIKKHXXXXXXXXXXXXXEYSVSSTDVVSLDWRKMKI 791
            A+RL+LDKRV  K + D ++     K+                  +STD+VSLDW+KMKI
Sbjct: 159  AKRLNLDKRVALKWNKDEKVVSSVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKI 218

Query: 790  PPVLSSSEQARLFKLMQPMKAIFEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVG 611
            PPVL+SSE A LFKLMQPMK + EV+E L  DL  EPT GELA A NM+V Q+++H +VG
Sbjct: 219  PPVLTSSEHAWLFKLMQPMKGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVG 278

Query: 610  QAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLST 431
            +AARNKLI HNLRLVLFVINKY+Q+ A+G KFQDLCQAGV+GLITAIDRFE KR FRLST
Sbjct: 279  RAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLST 338

Query: 430  YGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGIS 251
            YGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE++  L+R+PT+EEII +VGIS
Sbjct: 339  YGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKLEMIFSLKRMPTDEEIIEKVGIS 398

Query: 250  PERYHDVMKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXL 71
            PERYH+VM+ASK V SL+SRH  TQEE+IN ITD+DGV GD RR+PA            L
Sbjct: 399  PERYHEVMRASKPVSSLHSRHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSL 458

Query: 70   KPKESLVIRQRYGLDGKGDRTLG 2
            KPKESLVIRQRYGLDGKGDRTLG
Sbjct: 459  KPKESLVIRQRYGLDGKGDRTLG 481