BLASTX nr result

ID: Ophiopogon24_contig00001847 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00001847
         (534 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK59094.1| uncharacterized protein A4U43_C08F2910 [Asparagus...    60   3e-07
ref|XP_020244638.1| dihydroorotate dehydrogenase (quinone), mito...    58   1e-06

>gb|ONK59094.1| uncharacterized protein A4U43_C08F2910 [Asparagus officinalis]
          Length = 470

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = +1

Query: 274 ASMMARVWRSSVRDILCRRLRFGAFGLRQSSSVPVPEVAAPKLPFSPK 417
           +SM ARVWRSS ++IL RRL+F A G+R SSS+P  +VAAPK+P S K
Sbjct: 12  SSMAARVWRSSFKEILGRRLKFSAAGIRLSSSIPGSDVAAPKIPPSLK 59


>ref|XP_020244638.1| dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
           [Asparagus officinalis]
 ref|XP_020244639.1| dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
           [Asparagus officinalis]
 ref|XP_020244640.1| dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
           [Asparagus officinalis]
 ref|XP_020244641.1| dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
           [Asparagus officinalis]
          Length = 457

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +1

Query: 280 MMARVWRSSVRDILCRRLRFGAFGLRQSSSVPVPEVAAPKLPFSPK 417
           M ARVWRSS ++IL RRL+F A G+R SSS+P  +VAAPK+P S K
Sbjct: 1   MAARVWRSSFKEILGRRLKFSAAGIRLSSSIPGSDVAAPKIPPSLK 46


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