BLASTX nr result

ID: Ophiopogon24_contig00001840 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00001840
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264187.1| LOW QUALITY PROTEIN: protein MODIFIER OF SNC...   101   4e-22
ref|XP_020268057.1| protein MODIFIER OF SNC1 1-like [Asparagus o...    99   5e-21
gb|ONK67638.1| uncharacterized protein A4U43_C05F2160 [Asparagus...    65   2e-09

>ref|XP_020264187.1| LOW QUALITY PROTEIN: protein MODIFIER OF SNC1 1-like, partial
            [Asparagus officinalis]
          Length = 1437

 Score =  101 bits (252), Expect = 4e-22
 Identities = 67/146 (45%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
 Frame = -3

Query: 439  SSDVQNNNQESGPGATSIADAISVEASSGTSACQTETIKHVDDSGAKKPAFSSDLSSNXX 260
            SSDVQN NQE+GPG     D IS EA  GTS C +E +K   DSG KKPA S  LSS+  
Sbjct: 828  SSDVQNGNQETGPG-----DKISTEAVCGTSDCHSEQMKRAVDSGGKKPAQS--LSSS-- 878

Query: 259  XXXXXXXXXXXXXXXXXSLHQRQDTNAPTKTTLVTTSDIQHNTSSKQKQVGYRKKHG-TQ 83
                             S+   Q+     +     TSDI HNT S+QKQ+GYRKK+    
Sbjct: 879  -------VQSSVVTEAQSVSLGQEIKTTGEIAPEATSDILHNTVSRQKQLGYRKKNNILH 931

Query: 82   ENSMGGKQTAAGSVGSPKDTGEIAVS 5
            EN  GGKQT + S+G+PKDT E+ V+
Sbjct: 932  ENIAGGKQTTSSSIGNPKDTIEVEVN 957


>ref|XP_020268057.1| protein MODIFIER OF SNC1 1-like [Asparagus officinalis]
          Length = 1430

 Score = 98.6 bits (244), Expect = 5e-21
 Identities = 64/147 (43%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
 Frame = -3

Query: 439  SSDVQNNNQESGPGATSIADAISVEASSGTSACQTETIKHVDDSGAKKPAFSSDLSSNXX 260
            SSDVQNN Q++GPG     D  S EA  GT+   +E +K   DSG KKPA +S  S    
Sbjct: 820  SSDVQNNIQDTGPG-----DKFSTEALCGTTDPHSEEMKQAVDSGGKKPAQTSSSSGQSS 874

Query: 259  XXXXXXXXXXXXXXXXXSLHQRQDTNAPTKTTLVTTSDIQHNTSSKQKQVGYRKKHG-TQ 83
                              +   Q+     +  L TTSDI HNT S+QKQVGYRKK+    
Sbjct: 875  VVTEARA-----------VSPGQEIKPTVEIALETTSDILHNTISRQKQVGYRKKNNILL 923

Query: 82   ENSMGGKQTAAGSVGSPKDTGEIAVSA 2
            ENS GGKQT + S+G+ KDT +I V+A
Sbjct: 924  ENSTGGKQTTSSSIGNHKDTVKIEVNA 950


>gb|ONK67638.1| uncharacterized protein A4U43_C05F2160 [Asparagus officinalis]
          Length = 578

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = -3

Query: 328 IKHVDDSGAKKPAFSSDLSSNXXXXXXXXXXXXXXXXXXXSLHQRQDTNAPTKTTLVTTS 149
           +K   DSG KKPA S  LSS+                        Q+     +     TS
Sbjct: 1   MKRAVDSGGKKPAQS--LSSSVQSSVVTEAQSVSLG---------QEIKTTGEIAPEATS 49

Query: 148 DIQHNTSSKQKQVGYRKKHG-TQENSMGGKQTAAGSVGSPKDTGEIAVS 5
           DI HNT S+QKQ+GYRKK+    EN  GGKQT + S+G+PKDT E+ V+
Sbjct: 50  DILHNTVSRQKQLGYRKKNNILHENIAGGKQTTSSSIGNPKDTIEVEVN 98


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