BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00001136
         (380 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277024.1| pentatricopeptide repeat-containing protein ...    66   4e-10
ref|XP_020277016.1| pentatricopeptide repeat-containing protein ...    66   4e-10
ref|XP_020079889.1| pentatricopeptide repeat-containing protein ...    63   5e-09
ref|XP_020079888.1| pentatricopeptide repeat-containing protein ...    63   5e-09
gb|OAY67414.1| Pentatricopeptide repeat-containing protein, chlo...    62   2e-08
ref|XP_018675412.1| PREDICTED: pentatricopeptide repeat-containi...    60   5e-08

>ref|XP_020277024.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic isoform X2 [Asparagus officinalis]
 gb|ONK79603.1| uncharacterized protein A4U43_C01F8050 [Asparagus officinalis]
          Length = 463

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   HRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNLYKEMPQ 123
           HR EAMELARELV KDVF E S++RL++TFPMLNLYK  PQ
Sbjct: 412 HRPEAMELARELVSKDVFTEDSVKRLDRTFPMLNLYKGTPQ 452


>ref|XP_020277016.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic isoform X1 [Asparagus officinalis]
          Length = 586

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   HRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNLYKEMPQ 123
           HR EAMELARELV KDVF E S++RL++TFPMLNLYK  PQ
Sbjct: 535 HRPEAMELARELVSKDVFTEDSVKRLDRTFPMLNLYKGTPQ 575


>ref|XP_020079889.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like isoform X2 [Ananas comosus]
          Length = 603

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   HRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNLYKEMPQ 123
           HR EAM LAREL  K+V  E S++RLN+TFPMLNLYKE+PQ
Sbjct: 561 HRGEAMGLARELAAKNVLSEDSLKRLNRTFPMLNLYKEIPQ 601


>ref|XP_020079888.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like isoform X1 [Ananas comosus]
          Length = 604

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   HRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNLYKEMPQ 123
           HR EAM LAREL  K+V  E S++RLN+TFPMLNLYKE+PQ
Sbjct: 562 HRGEAMGLARELAAKNVLSEDSLKRLNRTFPMLNLYKEIPQ 602


>gb|OAY67414.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
           comosus]
          Length = 487

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   HRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNLYKEMPQ 123
           HR EAM LAREL  K V  E S++RLN+TFPMLNLYKE+PQ
Sbjct: 445 HRGEAMGLARELAAKIVLSEDSLKRLNRTFPMLNLYKEIPQ 485


>ref|XP_018675412.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
 ref|XP_018675413.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 607

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 26/44 (59%), Positives = 38/44 (86%)
 Frame = +1

Query: 1   HRAEAMELARELVGKDVFMEGSIRRLNKTFPMLNLYKEMPQPDD 132
           H+AEAMELA++L  ++VF E S++RLN+ FP+L+L+KE+PQP D
Sbjct: 564 HKAEAMELAKDLAMRNVFSEDSLKRLNQNFPILDLFKEIPQPVD 607