BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00001028
         (719 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...   469   e-150
gb|ABB53385.1| RNA polymerase II largest subunit, partial [Aexto...   425   e-149
gb|PLY82164.1| hypothetical protein LSAT_1X12220 [Lactuca sativa]     457   e-149
gb|ABB53386.1| RNA polymerase II largest subunit, partial [Berbe...   423   e-148
gb|ABB53404.1| RNA polymerase II largest subunit, partial [Nelum...   423   e-148
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial...   462   e-148
gb|KVH98528.1| RNA polymerase II, heptapeptide repeat, eukaryoti...   451   e-148
gb|ABB53390.1| RNA polymerase II largest subunit, partial [Cissu...   422   e-148
gb|ABB53393.1| RNA polymerase II largest subunit, partial [Gunne...   422   e-148
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su...   463   e-148
gb|ABB53413.1| RNA polymerase II largest subunit, partial [Vitis...   421   e-148
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su...   462   e-147
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su...   462   e-147
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos...   461   e-147
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su...   461   e-147
gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indi...   456   e-147
gb|ABB53389.1| RNA polymerase II largest subunit, partial [Buxus...   419   e-147
gb|ABB53395.1| RNA polymerase II largest subunit, partial [Hibbe...   419   e-147
gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japo...   456   e-147
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   459   e-147

>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score =  469 bits (1206), Expect = e-150
 Identities = 230/239 (96%), Positives = 236/239 (98%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEF NVYRYEIDD+ W+PSY
Sbjct: 870  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFNNVYRYEIDDNQWDPSY 929

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTI EFRNVFDAEVQKLEADRFQLGT+IATTGDNTWPMPVNLKRLIWNAQK
Sbjct: 930  MLPEHVEDLKTIPEFRNVFDAEVQKLEADRFQLGTDIATTGDNTWPMPVNLKRLIWNAQK 989

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFKVDPRRPSDMHPMEIVEAVDKLQE+L+VVPGDDFLS+EAQKNATLLFNILLRSTFASK
Sbjct: 990  TFKVDPRRPSDMHPMEIVEAVDKLQEKLRVVPGDDFLSMEAQKNATLLFNILLRSTFASK 1049

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 1050 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 1108


>gb|ABB53385.1| RNA polymerase II largest subunit, partial [Aextoxicon punctatum]
          Length = 240

 Score =  425 bits (1092), Expect = e-149
 Identities = 209/220 (95%), Positives = 215/220 (97%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK +F+ V+RYEIDD++WNPSY
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRVFRYEIDDENWNPSY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD R PSDMHPMEIVEAVDKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 141 TFKVDLRXPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 240


>gb|PLY82164.1| hypothetical protein LSAT_1X12220 [Lactuca sativa]
          Length = 1319

 Score =  457 bits (1176), Expect = e-149
 Identities = 225/239 (94%), Positives = 233/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLK+KKKEF+ +++YEIDD++WNPSY
Sbjct: 394  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKIKKKEFDRLFKYEIDDENWNPSY 453

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTIREFRNVFDAEVQKLEADR QLGTEIATTGDNTWPMPVNLKRLIWNAQK
Sbjct: 454  MLPEHVEDLKTIREFRNVFDAEVQKLEADRVQLGTEIATTGDNTWPMPVNLKRLIWNAQK 513

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFKVD RRPSDMHPMEIVEAVDKLQERL+VVPGDD LSIEAQKNATL FNILLRSTFASK
Sbjct: 514  TFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDQLSIEAQKNATLFFNILLRSTFASK 573

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVL EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 574  RVLSEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 632


>gb|ABB53386.1| RNA polymerase II largest subunit, partial [Berberidopsis beckleri]
          Length = 240

 Score =  423 bits (1087), Expect = e-148
 Identities = 208/220 (94%), Positives = 213/220 (96%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK +F+  +RYEIDD+ WNP Y
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRYFRYEIDDESWNPGY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 141 TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 240


>gb|ABB53404.1| RNA polymerase II largest subunit, partial [Nelumbo nucifera]
          Length = 240

 Score =  423 bits (1087), Expect = e-148
 Identities = 207/220 (94%), Positives = 215/220 (97%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKM+K EF+ V+RYEIDD++WNPSY
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMRKSEFDKVFRYEIDDENWNPSY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKLEADR+QLGTEIATTGDN WPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNNWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 141 TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 240


>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
          Length = 1705

 Score =  462 bits (1189), Expect = e-148
 Identities = 224/239 (93%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+  ++YEIDDD+WNPSY
Sbjct: 870  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKFFKYEIDDDNWNPSY 929

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTIREFRNVFDAEVQKLEADR+QLGTEIATTGDNTWP+PVNLKRLIWNAQK
Sbjct: 930  MLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNTWPLPVNLKRLIWNAQK 989

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFK+D RRPSDMHPMEIVEA+DKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 990  TFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 1049

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGC+AAQSIGEPATQMTLNTFHYAG
Sbjct: 1050 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSIGEPATQMTLNTFHYAG 1108


>gb|KVH98528.1| RNA polymerase II, heptapeptide repeat, eukaryotic [Cynara
           cardunculus var. scolymus]
          Length = 1114

 Score =  451 bits (1159), Expect = e-148
 Identities = 221/239 (92%), Positives = 232/239 (97%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLK+KK EF+ ++RYEIDD++WNPSY
Sbjct: 143 KYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKIKKGEFDRLFRYEIDDENWNPSY 202

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLP+HVEDLKTIREFRNVFDAEVQKLEADR QLGTEIATTGDN+WPMPVNLKRLIWNAQK
Sbjct: 203 MLPDHVEDLKTIREFRNVFDAEVQKLEADRVQLGTEIATTGDNSWPMPVNLKRLIWNAQK 262

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERL+VVPGDD LSIEAQKNATL FNILLRSTF+SK
Sbjct: 263 TFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDQLSIEAQKNATLFFNILLRSTFSSK 322

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
           RVL EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 323 RVLSEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 381


>gb|ABB53390.1| RNA polymerase II largest subunit, partial [Cissus tuberosa]
          Length = 240

 Score =  422 bits (1084), Expect = e-148
 Identities = 206/220 (93%), Positives = 215/220 (97%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+ V++YEIDD++WNPSY
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDRVFKYEIDDENWNPSY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKLEADR+QLGTEIATTGDN+WPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDD +S+EAQKNATL FNILLRSTFASK
Sbjct: 141 TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISVEAQKNATLFFNILLRSTFASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 240


>gb|ABB53393.1| RNA polymerase II largest subunit, partial [Gunnera chilensis]
          Length = 240

 Score =  422 bits (1084), Expect = e-148
 Identities = 207/220 (94%), Positives = 214/220 (97%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+ V++YEIDD++WNPSY
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFKYEIDDENWNPSY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDD +S+EAQKNATL FNILLRSTFASK
Sbjct: 141 TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSMEAQKNATLFFNILLRSTFASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVL EYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLNEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 240


>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
            guineensis]
          Length = 1842

 Score =  463 bits (1191), Expect = e-148
 Identities = 224/239 (93%), Positives = 235/239 (98%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK +F+ V++YEIDDD+WNPSY
Sbjct: 870  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRVFKYEIDDDNWNPSY 929

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTIREFRNVFDAEVQKLEADR+QLGTEIATTGDNTWP+PVNLKRLIWNAQK
Sbjct: 930  MLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNTWPLPVNLKRLIWNAQK 989

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFK+D RRPSDMHPMEIVEA+DKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 990  TFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 1049

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGC+AAQSIGEPATQMTLNTFHYAG
Sbjct: 1050 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSIGEPATQMTLNTFHYAG 1108


>gb|ABB53413.1| RNA polymerase II largest subunit, partial [Vitis piasezkii]
          Length = 240

 Score =  421 bits (1081), Expect = e-148
 Identities = 206/220 (93%), Positives = 215/220 (97%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMKK EF+ V++YEIDD++WNPSY
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDN+WPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDD +S+EAQKNATL FNILLRSTFASK
Sbjct: 141 TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTFASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 240


>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
            guineensis]
          Length = 1842

 Score =  462 bits (1188), Expect = e-147
 Identities = 224/239 (93%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+ ++RYEIDD++WNPSY
Sbjct: 870  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKIFRYEIDDNNWNPSY 929

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTIREF+NVFDAEVQKLEADR+QLGTEI TTGDNTWPMPVNLKRLIWNAQK
Sbjct: 930  MLPEHVEDLKTIREFKNVFDAEVQKLEADRYQLGTEIVTTGDNTWPMPVNLKRLIWNAQK 989

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFK+D RRPSDMHPMEIVEA+DKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 990  TFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 1049

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 1050 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 1108


>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
            nucifera]
          Length = 1848

 Score =  462 bits (1188), Expect = e-147
 Identities = 226/239 (94%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKM+K EF+ V+RYEIDD++WNPSY
Sbjct: 869  KYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMRKSEFDKVFRYEIDDENWNPSY 928

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTIREFRNVFDAEVQKLEADR+QLGTEIATTGDN WPMPVNLKRLIWNAQK
Sbjct: 929  MLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNNWPMPVNLKRLIWNAQK 988

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 989  TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 1048

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 1049 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 1107


>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
          Length = 1806

 Score =  461 bits (1186), Expect = e-147
 Identities = 226/239 (94%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EFE VYRYEIDDD+WNPSY
Sbjct: 870  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFEKVYRYEIDDDNWNPSY 929

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            +LPEHVEDLKTI+EF+NVFDAEVQKLEADR+QLGTEIATTGDN+W MPVNLKRLIWNAQK
Sbjct: 930  LLPEHVEDLKTIQEFKNVFDAEVQKLEADRYQLGTEIATTGDNSWAMPVNLKRLIWNAQK 989

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 990  TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 1049

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RV+KEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 1050 RVMKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 1108


>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
            dactylifera]
          Length = 1842

 Score =  461 bits (1187), Expect = e-147
 Identities = 224/239 (93%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+  ++YEIDDD+WNPSY
Sbjct: 870  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKGFKYEIDDDNWNPSY 929

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTIREFRNVFDAEVQKLEADR+QLGTEIATTGDNTWP+PVNLKRLIWNAQK
Sbjct: 930  MLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNTWPLPVNLKRLIWNAQK 989

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFK+D RRPSDMHPMEIVEA+DKLQERLKVVPGDDFLS+EAQKNATL FNILLRSTFASK
Sbjct: 990  TFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTFASK 1049

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGC+AAQSIGEPATQMTLNTFHYAG
Sbjct: 1050 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCIAAQSIGEPATQMTLNTFHYAG 1108


>gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indica Group]
          Length = 1449

 Score =  456 bits (1172), Expect = e-147
 Identities = 221/239 (92%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+NV+RYE+DD++W P+Y
Sbjct: 839  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNY 898

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHV+DLKTIREFRNVF+AEVQKLEADRFQLG+EIATTGDNTWPMPVNLKRLIWNAQK
Sbjct: 899  MLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGSEIATTGDNTWPMPVNLKRLIWNAQK 958

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFK+D RRPSDMHPMEIVEA+DKLQERLKVVPGDD +SIEAQKNATL FNILLRSTFASK
Sbjct: 959  TFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASK 1018

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLT+EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 1019 RVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 1077


>gb|ABB53389.1| RNA polymerase II largest subunit, partial [Buxus sempervirens]
          Length = 240

 Score =  419 bits (1078), Expect = e-147
 Identities = 206/220 (93%), Positives = 213/220 (96%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMDAVWIE QKLDSLKMKK +F+ V+RYEIDD++W+PSY
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDAVWIEDQKLDSLKMKKADFDKVFRYEIDDENWSPSY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKL+ADRFQLGTEIATTGDN WPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLQADRFQLGTEIATTGDNNWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDDFLS EAQKNATL FNILLRSTFASK
Sbjct: 141 TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSTEAQKNATLFFNILLRSTFASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 240


>gb|ABB53395.1| RNA polymerase II largest subunit, partial [Hibbertia aspera]
          Length = 240

 Score =  419 bits (1076), Expect = e-147
 Identities = 205/220 (93%), Positives = 214/220 (97%)
 Frame = -1

Query: 719 KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
           KYDGTVRNSLGDVIQFLYGEDGMD+VWIESQKLDSLKMKK EF+ V++YEIDD++WNPSY
Sbjct: 21  KYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSY 80

Query: 539 MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
           MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQL TEIATTGDN+WPMPVNLKRLIWNAQK
Sbjct: 81  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLATEIATTGDNSWPMPVNLKRLIWNAQK 140

Query: 359 TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
           TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDDFLS+EAQKNATL FNILLRST ASK
Sbjct: 141 TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKNATLFFNILLRSTLASK 200

Query: 179 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAA 60
           RVLKEYRLTREAF+WVIGEIESRFLQSLVAPGEMIGCVAA
Sbjct: 201 RVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAA 240


>gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japonica Group]
          Length = 1526

 Score =  456 bits (1172), Expect = e-147
 Identities = 221/239 (92%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK EF+NV+RYE+DD++W P+Y
Sbjct: 540  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNY 599

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHV+DLKTIREFRNVF+AEVQKLEADRFQLG+EIATTGDNTWPMPVNLKRLIWNAQK
Sbjct: 600  MLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGSEIATTGDNTWPMPVNLKRLIWNAQK 659

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFK+D RRPSDMHPMEIVEA+DKLQERLKVVPGDD +SIEAQKNATL FNILLRSTFASK
Sbjct: 660  TFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASK 719

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLT+EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 720  RVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 778


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
          Length = 1848

 Score =  459 bits (1182), Expect = e-147
 Identities = 225/239 (94%), Positives = 234/239 (97%)
 Frame = -1

Query: 719  KYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDDDHWNPSY 540
            KYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QKLDSLKMKK EF+ V++YEIDD++WNPSY
Sbjct: 869  KYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSY 928

Query: 539  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQK 360
            MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDN+WPMPVNLKRLIWNAQK
Sbjct: 929  MLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWNAQK 988

Query: 359  TFKVDPRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSIEAQKNATLLFNILLRSTFASK 180
            TFKVD RRPSDMHPMEIVEAVDKLQERLKVVPGDD +S+EAQKNATL FNILLRSTFASK
Sbjct: 989  TFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTFASK 1048

Query: 179  RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 3
            RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG
Sbjct: 1049 RVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAG 1107