BLASTX nr result
ID: Ophiopogon24_contig00001023
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00001023
(1893 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium bar... 142 3e-37
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 129 1e-33
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 120 4e-31
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 120 4e-31
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis] 133 5e-31
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo... 115 1e-29
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo... 124 2e-28
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 106 2e-27
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 105 2e-26
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo... 105 2e-26
gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposo... 113 1e-25
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum] 122 2e-25
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 103 5e-25
gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposo... 114 6e-25
gb|KYP64461.1| Retrovirus-related Pol polyprotein from transposo... 106 7e-24
gb|PON41343.1| Zinc finger, CCHC-type [Parasponia andersonii] 100 7e-24
gb|OMO88735.1| Zinc finger, CCHC-type [Corchorus capsularis] 104 9e-24
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo... 112 2e-23
gb|KYP63829.1| Retrovirus-related Pol polyprotein from transposo... 105 3e-23
gb|PNX96445.1| copia LTR rider [Trifolium pratense] 101 4e-23
>gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium barbadense]
Length = 718
Score = 142 bits (358), Expect(2) = 3e-37
Identities = 77/206 (37%), Positives = 119/206 (57%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSLANR++LKQRLF RM EG + HI++F +++N+L +EV I+DEDQA+LLLCSLPS
Sbjct: 362 KSLANRLVLKQRLFTFRMNEGELLKDHISQFITLLNDLKNVEVHIDDEDQAMLLLCSLPS 421
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAKEKKGKQRSS 363
+YKSF++ +IY GK+ L +V+ HLL++DK+D + + D +++ KK ++R
Sbjct: 422 SYKSFKETLIY-GKDKLSFEDVKGHLLSRDKLDNEFDLNSKADRQASVLVASKKREKR-- 478
Query: 364 TNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGDEEVV 543
C +CK+ GHV+ ++ D GD+ ++
Sbjct: 479 -------CRYCKKLGHVK--------ADYYKLRNKRAAESNEEDVVGANLVDEGGDDFLL 523
Query: 544 CSVTDSLVSNDDDWIVDSGCSKHISP 621
S +D+ +WI+DSGCS H+ P
Sbjct: 524 VSTSDN-SKLTSEWILDSGCSFHMYP 548
Score = 43.9 bits (102), Expect(2) = 3e-37
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISL 776
N + +IG G V++R +DG++ TLSDV +VP+ R N+ISL
Sbjct: 568 NDSSSKIIGIGTVKIRIHDGTIKTLSDVRYVPDLRKNLISL 608
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 129 bits (324), Expect(2) = 1e-33
Identities = 72/213 (33%), Positives = 114/213 (53%), Gaps = 7/213 (3%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSLAN++ LK+RL+ +RM EG P+ SH+ EF SII +L+ IE+KI+DED+A+LL+ SLPS
Sbjct: 96 KSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPS 155
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAKEKKG----- 348
TYK F++ ++Y ++L +V+ +LL+K+K D + G+ S ++KG
Sbjct: 156 TYKHFKEIMLYSNNDTLSFEDVKSNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNK 215
Query: 349 --KQRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADL 522
+ +S K+C +CK+ GH +
Sbjct: 216 KSRSKSRGRKSNKTCRYCKKFGH--------DISDCFILKKKQERQEKGKNPAEAANVET 267
Query: 523 VGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
D +V+ SV+ S +WI+DSGC+ H+ P
Sbjct: 268 DSDGDVMISVSSDKRSK-TEWILDSGCTFHMCP 299
Score = 45.1 bits (105), Expect(2) = 1e-33
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
N +C + G G +Q++++DG++ TLS+V +P+ + N+ISLG
Sbjct: 319 NDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLG 360
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 120 bits (301), Expect(2) = 4e-31
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSL NR+ LKQRL+ L+M+EG PV+ H+ +F SII +L+ I+ KI+DEDQA+++LCSLP
Sbjct: 598 KSLTNRLYLKQRLYALKMEEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPP 657
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGS--PNGDDSSALYAKEKKGKQR 357
+Y++F D ++Y G++ L + EV+ + L+ ++ K++TG N + + K K
Sbjct: 658 SYENFVDTMMY-GRDDLTLEEVK-NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGG 715
Query: 358 SSTNSEVKS-------CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVA 516
SS+ S +S C +CK+ GH++ A
Sbjct: 716 SSSKSHPRSQSKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVAD--------A 767
Query: 517 DLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHIS 618
D D E+V +V+DS WI+D+G + HIS
Sbjct: 768 DSSSDAEIVLAVSDSYAGG--RWILDTGATFHIS 799
Score = 45.4 bits (106), Expect(2) = 4e-31
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISL 776
N C V+G G V+++ +DG + TL+DV H+PE + N+ISL
Sbjct: 819 NDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISL 859
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 120 bits (301), Expect(2) = 4e-31
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSL NR+ LKQRL+ L+M+EG PV+ H+ +F SII +L+ I+ KI+DEDQA+++LCSLP
Sbjct: 619 KSLTNRLYLKQRLYALKMEEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPP 678
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGS--PNGDDSSALYAKEKKGKQR 357
+Y++F D ++Y G++ L + EV+ + L+ ++ K++TG N + + K K
Sbjct: 679 SYENFVDTMMY-GRDDLTLEEVK-NALSSSELRKKITGKVVENNEGEGLVARGRSKAKGG 736
Query: 358 SSTNSEVKS-------CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVA 516
SS+ S +S C +CK+ GH++ A
Sbjct: 737 SSSKSHPRSQSKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVAD--------A 788
Query: 517 DLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHIS 618
D D E+V +V+DS WI+D+G + HIS
Sbjct: 789 DSSSDAEIVLAVSDSYAGG--RWILDTGATFHIS 820
Score = 45.4 bits (106), Expect(2) = 4e-31
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISL 776
N C V+G G V+++ +DG + TL+DV H+PE + N+ISL
Sbjct: 840 NDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISL 880
>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
Length = 289
Score = 133 bits (334), Expect = 5e-31
Identities = 70/142 (49%), Positives = 97/142 (68%), Gaps = 6/142 (4%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSL NR++LKQRL+ L M EG P+ SHI EF S+I L KI+VKI DEDQALLLLCSL
Sbjct: 88 KSLTNRLLLKQRLYTLWMSEGTPIKSHIGEFNSVITYLSKIDVKINDEDQALLLLCSLLP 147
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAKEKKGKQRSS 363
+YK FRD +IY G++S+ I + +E+LLN +KI+K+LT S +GD + L+ + + ++R
Sbjct: 148 SYKHFRDTMIY-GRDSIGIKDAKENLLNTEKINKELTTSESGDKADGLFVR-GRSEERDF 205
Query: 364 TNSEVKS------CSFCKRTGH 411
+ KS C +CK+ H
Sbjct: 206 GGNMYKSKHRNLTCRYCKKKEH 227
>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 364
Score = 115 bits (289), Expect(2) = 1e-29
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 7/213 (3%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KS+ N+++LK+RLF L M+EG P+ H+ E S++ EL I+VKIEDED A++LL SLP
Sbjct: 106 KSICNKLLLKRRLFGLHMKEGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPP 165
Query: 184 TYKSFRDAIIYGGKESLKINEV------REHLLNKDKIDKQLTGSPNGDDSSALYAKEKK 345
+Y+SF +++ GKE + + EV RE L ++ GS +S K+KK
Sbjct: 166 SYESFVNSLSV-GKECITMEEVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKK 224
Query: 346 GKQRSSTNSEVKS-CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADL 522
K + TN K C++CK GH + +
Sbjct: 225 DKSKRKTNVNPKDICNYCKEPGHWKKDCPKKKGKPSAAVAK----------------EES 268
Query: 523 VGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
+ E+V S+ D ++D WI+DSGCS H+ P
Sbjct: 269 TSENELVLSIADQPQHSEDQWILDSGCSFHMCP 301
Score = 45.1 bits (105), Expect(2) = 1e-29
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
N A C IG G ++++ +DG TL++V HVPE + N+IS+G
Sbjct: 321 NDAPCKTIGIGTIKIKMHDGITRTLTEVRHVPELKKNLISVG 362
>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 262
Score = 124 bits (312), Expect = 2e-28
Identities = 59/143 (41%), Positives = 93/143 (65%), Gaps = 7/143 (4%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSLAN++ LK+RL+ +RM EG P+ SH+ EF SII +L+ IE+KI+DED+A+LL+ SLPS
Sbjct: 72 KSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPS 131
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAKEKKG----- 348
TYK F++ ++Y ++L +V+ +LL+K+K D + G+ S ++KG
Sbjct: 132 TYKHFKEIMLYSNNDTLSFEDVKSNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNK 191
Query: 349 --KQRSSTNSEVKSCSFCKRTGH 411
+ +S K+C +CK+ GH
Sbjct: 192 KSRSKSRRRKTNKTCRYCKKFGH 214
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 106 bits (264), Expect(2) = 2e-27
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSL N+++LKQRLF LRM EG + H+ + +++ EL I+VKIEDED AL+LL SLP
Sbjct: 92 KSLTNKLLLKQRLFGLRMAEGTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPM 151
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAKEKKGKQRSS 363
++++F + I GK+++ + EVR L +++ + + G+ S L+ +KG++
Sbjct: 152 SFENFVQSFIV-GKDTVSLEEVRSALHSRE-LRHKANGTSTDIQPSGLFTSSRKGRKNGG 209
Query: 364 TNSEVKS--------CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVAD 519
++ S C++CK GH + +
Sbjct: 210 KKNKPMSKGAKPDDVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAV------------AEE 257
Query: 520 LVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISPK 624
EE + V D + D W++DSG S HI P+
Sbjct: 258 DTNSEEDIALVADEHTHHSDVWVLDSGASYHICPR 292
Score = 47.0 bits (110), Expect(2) = 2e-27
Identities = 20/41 (48%), Positives = 31/41 (75%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISL 776
NS+ C V+G G++++R++DGS TL++V HVP N+ISL
Sbjct: 311 NSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISL 351
>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 609
Score = 105 bits (263), Expect(2) = 2e-26
Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 9/215 (4%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KS+ N+++LK+RLF L M+E P+ H+ E SI+ EL I+VKIEDED A++LL SLP
Sbjct: 30 KSICNKLLLKRRLFGLHMKEDTPLQDHLDELNSILMELRYIDVKIEDEDAAMILLASLPP 89
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYA---------K 336
+Y+SF +++ GKE + + EV+ L +++ K S G + + L A K
Sbjct: 90 SYESFVNSLTV-GKECITMEEVKSSLHSRELWFKASANS-EGVNGAGLLAFNSTKNGKKK 147
Query: 337 EKKGKQRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVA 516
+++GK+++ N C++CK GH +
Sbjct: 148 KEQGKKKTKVNPR-DICNYCKEPGHWKKDCPKKRNQKSVAVAAQ---------------E 191
Query: 517 DLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
D + E+V S+ D+ + + W++DSGCS H+ P
Sbjct: 192 DSSFENELVLSIVDNHQHSAEQWVLDSGCSYHMCP 226
Score = 44.7 bits (104), Expect(2) = 2e-26
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
N C IG G +Q++ +DG + TL++V HVP+ + N+IS+G
Sbjct: 246 NDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVG 287
>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 507
Score = 105 bits (263), Expect(2) = 2e-26
Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 9/215 (4%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KS+ N+++LK+RLF L M+E P+ H+ E SI+ EL I+VKIEDED A++LL SLP
Sbjct: 3 KSICNKLLLKRRLFGLHMKEDTPLQDHLDELNSILMELRYIDVKIEDEDAAMILLASLPP 62
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYA---------K 336
+Y+SF +++ GKE + + EV+ L +++ K S G + + L A K
Sbjct: 63 SYESFVNSLTV-GKECITMEEVKSSLHSRELWFKASANS-EGVNGAGLLAFNSTKNGKKK 120
Query: 337 EKKGKQRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVA 516
+++GK+++ N C++CK GH +
Sbjct: 121 KEQGKKKTKVNPR-DICNYCKEPGHWKKDCPKKRNQKSVAVAAQ---------------E 164
Query: 517 DLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
D + E+V S+ D+ + + W++DSGCS H+ P
Sbjct: 165 DSSFENELVLSIVDNHQHSAEQWVLDSGCSYHMCP 199
Score = 44.7 bits (104), Expect(2) = 2e-26
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
N C IG G +Q++ +DG + TL++V HVP+ + N+IS+G
Sbjct: 219 NDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVG 260
>gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 352
Score = 113 bits (283), Expect(2) = 1e-25
Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KS+ N+++LK+RLF L M+EG P+ H+ E S++ EL I+VKIEDED A++LL LP
Sbjct: 106 KSICNKLLLKRRLFGLHMKEGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLAYLPP 165
Query: 184 TYKSFRDAIIYGGKESLKINEV------REHLLNKDKIDKQLTGSPNGDDSSALYAKEKK 345
+Y+SF +++ GKE + + EV RE L ++ GS +S K+KK
Sbjct: 166 SYESFVNSLSV-GKECITMEEVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKK 224
Query: 346 GKQRSSTNSEVKS-CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADL 522
K + TN K C++CK GH + +
Sbjct: 225 DKSKRKTNVNPKDICNYCKEPGHWKKDCPKKKGKPSAAVAK----------------EES 268
Query: 523 VGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
+ E+V S+ D ++D WI+DSGCS H+ P
Sbjct: 269 TSENELVLSIADQPQHSEDQWILDSGCSFHMCP 301
Score = 33.9 bits (76), Expect(2) = 1e-25
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVP 749
N A C IG G ++++ +DG TL+ V HVP
Sbjct: 321 NDAPCKTIGIGTIKIKMHDGITRTLTKVRHVP 352
>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
Length = 707
Score = 122 bits (307), Expect = 2e-25
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSLAN++ LK+RLF LRM EG P+ SH+ EF SII +L+ ++V+I+DED+A+LL+ SLP
Sbjct: 94 KSLANKLRLKERLFTLRMSEGTPIQSHLGEFNSIIIDLENLDVEIDDEDKAVLLIVSLPP 153
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAKEKKG----K 351
+Y+ F++ ++YG +L ++V+ +LL+K+K D Q+ +G+ + G
Sbjct: 154 SYRHFKEIMLYGNNVTLSFDDVKSNLLSKEKFDTQIHSESSGEGLVVRGRNHEVGASGKN 213
Query: 352 QRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADLVGD 531
Q S K C +CK+ H + V
Sbjct: 214 QSKSKGKNSKYCRYCKKRNH----EISECYKLKNKQNREDKGKQPEKSAEASFVETESDG 269
Query: 532 EEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
E + S T+ N +W++DSGC+ H+SP
Sbjct: 270 ECFIASGTEQRSKN--EWVLDSGCTFHMSP 297
>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 593
Score = 103 bits (256), Expect(2) = 5e-25
Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 9/215 (4%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KS+ N+++LK+RLF L M+E P+ H+ E SI+ EL I VKIEDED A++LL SLP
Sbjct: 82 KSICNKLLLKRRLFGLHMKEDTPLQDHLDELNSILMELRDINVKIEDEDAAMILLASLPP 141
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYA---------K 336
+Y+SF +++ GKE + + EV+ L +++ + + + + G + + L A K
Sbjct: 142 SYESFVNSLSV-GKECITMEEVKSSLHSRE-LRFKASANSEGVNGAGLLAFNSTTNGKKK 199
Query: 337 EKKGKQRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVA 516
+++GK+++ N C++CK GH +
Sbjct: 200 KEQGKKKTKVNPR-DICNYCKEPGHWKKDCPKKRNQKSVVVAAQ---------------E 243
Query: 517 DLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
D + E+V S+ D+ + W++DSGCS H+ P
Sbjct: 244 DSSFENELVLSIVDNHQHFVEQWVLDSGCSYHMCP 278
Score = 42.4 bits (98), Expect(2) = 5e-25
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
N C I G +Q++ +DG + TL++V HVP+ + N+IS+G
Sbjct: 298 NDMACKTISIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVG 339
>gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 254
Score = 114 bits (286), Expect = 6e-25
Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KS+ N+++LK RLF L M+EG P+ H+ E S++ EL I+VKIEDED A++LL SLP
Sbjct: 3 KSICNKLLLKMRLFGLHMKEGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPP 62
Query: 184 TYKSFRDAIIYGGKESLKINEV------REHLLNKDKIDKQLTGSPNGDDSSALYAKEKK 345
+Y+SF +++ GKE + + EV RE L ++ GS +S K+KK
Sbjct: 63 SYESFVNSLSV-GKECITMEEVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKK 121
Query: 346 GKQRSSTNSEVKS-CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADL 522
K + TN K C++CK GH + +
Sbjct: 122 HKSKRKTNVNPKDICNYCKEPGHWKKDCPKKKGKPSIAVAK----------------EES 165
Query: 523 VGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
+ E+V S+ D ++D WI+DSGCS H+ P
Sbjct: 166 TSENELVLSIADHPQHSEDQWILDSGCSFHMCP 198
>gb|KYP64461.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 597
Score = 106 bits (264), Expect(2) = 7e-24
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Frame = +1
Query: 1 KKSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLP 180
KKSL NR+ KQRL+ L+M E V H+ F II +L I VK++DED A++LLCSLP
Sbjct: 8 KKSLTNRLYQKQRLYTLQMSENMSVRDHLDNFNRIILDLQCIGVKVDDEDLAIILLCSLP 67
Query: 181 STYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAK-------- 336
+Y++F D ++Y G++S+ +N V++ L +K+ + +++ S N DD ++
Sbjct: 68 KSYENFIDTMLY-GRDSITLNNVKDSLQSKE-LKRRVVSSSNVDDVGLTVSRGRSMERGN 125
Query: 337 EKKGKQRSSTNSEVKS--CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTH 510
KG RS++ S+ K C CK GH+R +
Sbjct: 126 SSKGHTRSNSLSKSKKVRCYKCKEVGHIRKNCPQLKKDRNSNASVAVVRSSATVSGESSD 185
Query: 511 VADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHIS 618
D D +V +T S S D W++D+G S H++
Sbjct: 186 EGD---DGDV---LTVSTTSFADTWVMDTGASYHMT 215
Score = 35.4 bits (80), Expect(2) = 7e-24
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 672 VIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
V G GAVQ++ YDG + T D +VP R N+IS+G
Sbjct: 241 VKGNGAVQIKMYDGMVRTF-DAWYVPGLRKNLISIG 275
>gb|PON41343.1| Zinc finger, CCHC-type [Parasponia andersonii]
Length = 297
Score = 100 bits (250), Expect(2) = 7e-24
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSLANR+ +KQRL +M E ++ I +F II++L+ IE+K+EDED+AL+LL +LP
Sbjct: 3 KSLANRLHMKQRLHSFKMNEEKSISDQIDKFNKIIDDLENIEIKLEDEDKALILLNALPK 62
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPN-GDDSSALYAKEK------ 342
Y+ F+DA++YG ++++ ++EV+ + K+ K+ N G+ A EK
Sbjct: 63 AYEHFKDAMLYGREQTITLDEVQSAVKAKELPRKKEGKEENTGEGLMARGRSEKCDNKAP 122
Query: 343 KGKQRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVADL 522
+ + RS + +K C C + GH + VA
Sbjct: 123 RNESRSKSKGRLK-CFHCHKEGHFK----------RDCPDRKKKVHEKPKDPGEASVASD 171
Query: 523 VGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
D V VTD + +WI+DSGCS H+ P
Sbjct: 172 GYDSAEVLVVTDE--DSSKEWIMDSGCSFHMCP 202
Score = 40.8 bits (94), Expect(2) = 7e-24
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
N+ C V G G+V++R +DG L V +VPE + N+ISLG
Sbjct: 222 NNKPCKVAGIGSVRIRMFDGMERILQQVRYVPELKRNLISLG 263
>gb|OMO88735.1| Zinc finger, CCHC-type [Corchorus capsularis]
Length = 817
Score = 104 bits (259), Expect(2) = 9e-24
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 10/216 (4%)
Frame = +1
Query: 1 KKSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLP 180
KKSL NR+ KQ L+ +M E P+ H+ F II +L + VKIEDED AL+LLCSLP
Sbjct: 66 KKSLINRLYQKQGLYTFKMAENTPIKDHLDSFNRIILDLGGVRVKIEDEDLALILLCSLP 125
Query: 181 STYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAKEKKGKQRS 360
++++FRD ++Y G++++ +N+V++ LL+K+ +K S + D + L + K++S
Sbjct: 126 RSFQNFRDTMLY-GRDTIALNDVKDALLSKEMQNKV---SADVDGEAGLIVTRGRNKEKS 181
Query: 361 STNSEVKS----------CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTH 510
S + +S C +C GH+ +
Sbjct: 182 SGTARFRSHSKSRVSSLRCFYCNEKGHLHKECPERKKGNSSEKKESNVKATAAIVQEGSS 241
Query: 511 VADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHIS 618
+ + DE +T S + + W++ +G S H++
Sbjct: 242 LVESSDDEVGTNVLTVSTAGSANKWVLYTGASYHMT 277
Score = 37.0 bits (84), Expect(2) = 9e-24
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +3
Query: 669 SVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
SV G G+VQ++++DG++ T D VPE R N+ISLG
Sbjct: 302 SVKGSGSVQIKTHDGTIRTF-DAWLVPELRKNLISLG 337
>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 112 bits (281), Expect = 2e-23
Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 8/214 (3%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSL N++ LK+RL L+M+EG+ + H++ FT + +L ++V+I++EDQA++LLCSLPS
Sbjct: 94 KSLTNKLYLKKRLHQLKMEEGSSIKEHVSLFTKAVLDLKSVDVRIDEEDQAVMLLCSLPS 153
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAK--------E 339
++++ D +++ G+++L + EV+ L +++ K G D AL A+ +
Sbjct: 154 SFENLVDTMLF-GRDTLTLEEVKATLNSRELKKKITENKGEGGDPEALMARGRLEKRDSK 212
Query: 340 KKGKQRSSTNSEVKSCSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVAD 519
K K+RS +E K+C +CK+ GH R VAD
Sbjct: 213 SKNKRRSKYKNE-KACYYCKKEGHFRKECPERKKKNNGKYNDESDIAV---------VAD 262
Query: 520 LVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
EV ++ S + ++WI+DSGCS H++P
Sbjct: 263 GYESAEV---LSISTKKHSEEWILDSGCSFHMTP 293
>gb|KYP63829.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 409
Score = 105 bits (262), Expect(2) = 3e-23
Identities = 69/216 (31%), Positives = 112/216 (51%), Gaps = 10/216 (4%)
Frame = +1
Query: 1 KKSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLP 180
+KSL NR+ KQRL+ L+M E V H+ F II +L I VK++DED A++LLCSLP
Sbjct: 11 QKSLTNRLYQKQRLYTLQMSENMSVRDHLDNFNRIILDLQSIGVKVDDEDLAIILLCSLP 70
Query: 181 STYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDD--------SSALYAK 336
+Y++F D ++YG ++S+ +N V+++L +K+ + +++ S N DD SS
Sbjct: 71 KSYENFIDTMLYG-RDSITLNNVKDNLQSKE-LKRRVVSSSNMDDVGLSVSRGSSMERGN 128
Query: 337 EKKGKQRSSTNSEVKS--CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTH 510
KG RS++ S+ K C CK GH+R +
Sbjct: 129 SSKGHTRSNSLSKSKKVRCYKCKEVGHIRKNSPQLKKDRNSNASEAVVRSSATVSGESSD 188
Query: 511 VADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHIS 618
GD+ V +V+ + +N W++D+G S H++
Sbjct: 189 E----GDDGDVLTVSTTGFANT--WVMDTGASYHMT 218
Score = 33.9 bits (76), Expect(2) = 3e-23
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 672 VIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
VI G VQ++ YDG + T D +VP R N+IS+G
Sbjct: 244 VIDSGVVQIKMYDGMVRTF-DAWYVPGLRKNLISIG 278
>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
Length = 1318
Score = 101 bits (251), Expect(2) = 4e-23
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Frame = +1
Query: 4 KSLANRIILKQRLFLLRMQEGAPVNSHIAEFTSIINELDKIEVKIEDEDQALLLLCSLPS 183
KSL NR+ LKQ L+ +M E + + F +I +L+ I+VKI+DEDQALLLLC+LP
Sbjct: 95 KSLVNRLYLKQALYSFKMVEDKVLAEQLDMFNKLILDLENIDVKIDDEDQALLLLCALPR 154
Query: 184 TYKSFRDAIIYGGKESLKINEVREHLLNKDKIDKQLTGSPNGDDSSALYAK--------E 339
++ F++ ++Y G+ESL EV+ L +KD +++ + A+ K +
Sbjct: 155 SHAHFKETLLY-GRESLTFEEVQSALYSKDLNERKEHKPSTVGEGLAVKGKFLRKNGKFD 213
Query: 340 KKGKQRSSTNSEVKS---CSFCKRTGHVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTH 510
KKGK +S + S+ S C CK+ GH R
Sbjct: 214 KKGKSQSKSYSDEVSGIRCYHCKKEGHTRKVCPERLKDHGGNGNAAIVQD---------- 263
Query: 511 VADLVGDEEVVCSVTDSLVSNDDDWIVDSGCSKHISP 621
D + +V S +DS +WI+DSGC+ H++P
Sbjct: 264 --DFESSDVLVVSSSDS----RKEWIMDSGCTWHMTP 294
Score = 37.7 bits (86), Expect(2) = 4e-23
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +3
Query: 654 NSARCSVIGKGAVQLRSYDGSMTTLSDVCHVPESRYNIISLG 779
N+ C + G G+V+ + +D S+ L++V +VP+ + N++SLG
Sbjct: 314 NNKACKIAGVGSVRFKLHDESIRLLTEVRYVPDLKRNLLSLG 355