BLASTX nr result

ID: Ophiopogon24_contig00000902 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00000902
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK71542.1| uncharacterized protein A4U43_C04F9710 [Asparagus...    58   5e-07
ref|XP_020260630.1| LOW QUALITY PROTEIN: DEAD-box ATP-dependent ...    58   6e-07

>gb|ONK71542.1| uncharacterized protein A4U43_C04F9710 [Asparagus officinalis]
          Length = 412

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 46/127 (36%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
 Frame = -2

Query: 345 MGRNFEESMARSGGADDIETPINXXXXXXXXXXXXXXXXKTEEE---GLAAQEETLTLDD 175
           MGRN E SMA    ADD+E P N                K  EE   G  A ++TLTLD 
Sbjct: 1   MGRNLEVSMAHRDEADDLEIPTNEKNHDKKSKKEKKKKRKNNEESVNGEPAADQTLTLDS 60

Query: 174 XXXXXXXXXXXE---------LQPAENSEXXXXXXXKDEDSNGEVRVLEEAGANGVDGAM 22
                      +         L+P+E+SE       K++D +G     EE G NGV+G  
Sbjct: 61  TANEESKSKKNKKKRESTESELEPSEDSEKKKKKKKKEKDLSGA----EEEGINGVEGVK 116

Query: 21  GVVVTGK 1
           GVVVTGK
Sbjct: 117 GVVVTGK 123


>ref|XP_020260630.1| LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 5
           [Asparagus officinalis]
          Length = 555

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 46/127 (36%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
 Frame = -2

Query: 345 MGRNFEESMARSGGADDIETPINXXXXXXXXXXXXXXXXKTEEE---GLAAQEETLTLDD 175
           MGRN E SMA    ADD+E P N                K  EE   G  A ++TLTLD 
Sbjct: 1   MGRNLEVSMAHRDEADDLEIPTNEKNHDKKSKKEKKKKRKNNEESVNGEPAADQTLTLDS 60

Query: 174 XXXXXXXXXXXE---------LQPAENSEXXXXXXXKDEDSNGEVRVLEEAGANGVDGAM 22
                      +         L+P+E+SE       K++D +G     EE G NGV+G  
Sbjct: 61  TANEESKSKKNKKKRESTESELEPSEDSEKKKKKKKKEKDLSGA----EEEGINGVEGVK 116

Query: 21  GVVVTGK 1
           GVVVTGK
Sbjct: 117 GVVVTGK 123


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