BLASTX nr result

ID: Ophiopogon24_contig00000834 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00000834
         (896 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK79559.1| uncharacterized protein A4U43_C01F7610 [Asparagus...    62   4e-07
ref|XP_020276753.1| LOW QUALITY PROTEIN: heterogeneous nuclear r...    62   6e-07
ref|WP_071880893.1| hypothetical protein [Synechocystis sp. PCC ...    53   7e-06

>gb|ONK79559.1| uncharacterized protein A4U43_C01F7610 [Asparagus officinalis]
          Length = 330

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 60  NPSAPTGGYVSGPPGAPRSPWNNQAPT 140
           NPSAPTGGY+S PPGAPRSPWNNQAPT
Sbjct: 292 NPSAPTGGYMSAPPGAPRSPWNNQAPT 318


>ref|XP_020276753.1| LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein 1-like
           [Asparagus officinalis]
          Length = 466

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 60  NPSAPTGGYVSGPPGAPRSPWNNQAPT 140
           NPSAPTGGY+S PPGAPRSPWNNQAPT
Sbjct: 292 NPSAPTGGYMSAPPGAPRSPWNNQAPT 318


>ref|WP_071880893.1| hypothetical protein [Synechocystis sp. PCC 6714]
          Length = 61

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
 Frame = +2

Query: 5   WGLWRIQWRIW---WAFWSLWQS*CSYW---WLCEWSTWCSKEPLEQSSSHRIWIIR--- 157
           WG W ++WRIW   W  WS+W    S W   W+  W  W            R+W+IR   
Sbjct: 3   WGFWSVRWRIWSVRWRIWSIWWRIWSIWWRIWIIRWGVWI--------IWWRVWVIRWRI 54

Query: 158 LCWQC 172
            CW C
Sbjct: 55  WCWGC 59