BLASTX nr result
ID: Ophiopogon24_contig00000827
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00000827
(599 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020276753.1| LOW QUALITY PROTEIN: heterogeneous nuclear r... 77 8e-13
ref|XP_008785173.1| PREDICTED: heterogeneous nuclear ribonucleop... 67 2e-09
ref|XP_020112516.1| heterogeneous nuclear ribonucleoprotein 1-li... 66 4e-09
ref|XP_010920312.1| PREDICTED: heterogeneous nuclear ribonucleop... 65 6e-09
ref|XP_008802392.1| PREDICTED: heterogeneous nuclear ribonucleop... 65 8e-09
ref|XP_009405917.1| PREDICTED: heterogeneous nuclear ribonucleop... 64 1e-08
ref|XP_009420757.1| PREDICTED: heterogeneous nuclear ribonucleop... 59 1e-06
gb|PKA55058.1| Heterogeneous nuclear ribonucleoprotein 1 [Aposta... 58 2e-06
ref|XP_020692322.1| heterogeneous nuclear ribonucleoprotein 1-li... 58 2e-06
ref|XP_020578961.1| LOW QUALITY PROTEIN: heterogeneous nuclear r... 57 3e-06
dbj|GAV81395.1| RRM_1 domain-containing protein, partial [Cephal... 57 5e-06
>ref|XP_020276753.1| LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein 1-like
[Asparagus officinalis]
Length = 466
Score = 76.6 bits (187), Expect = 8e-13
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQGGYGAGQVSGPPGGPAGY 595
DANGN+GYSN+WRSDPSQGGYGAGQV G PGGPAGY
Sbjct: 412 DANGNSGYSNSWRSDPSQGGYGAGQVGGQPGGPAGY 447
>ref|XP_008785173.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Phoenix
dactylifera]
Length = 468
Score = 66.6 bits (161), Expect = 2e-09
Identities = 28/38 (73%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQG-GYGAGQVSGPPGGPAGYG 598
DA+G +GY N+WR+DPSQG GYG QV+GPPGGPAGYG
Sbjct: 417 DASGGSGYPNSWRADPSQGIGYGTSQVNGPPGGPAGYG 454
>ref|XP_020112516.1| heterogeneous nuclear ribonucleoprotein 1-like [Ananas comosus]
gb|OAY70364.1| Heterogeneous nuclear ribonucleoprotein 1 [Ananas comosus]
Length = 454
Score = 65.9 bits (159), Expect = 4e-09
Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQ-GGYGAGQVSGPPGGPAGYG 598
DANG++GYSNAWRSDPSQ YG+GQV+GP GGPA YG
Sbjct: 403 DANGSSGYSNAWRSDPSQAAAYGSGQVNGPAGGPANYG 440
>ref|XP_010920312.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Elaeis
guineensis]
Length = 463
Score = 65.5 bits (158), Expect = 6e-09
Identities = 27/38 (71%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQG-GYGAGQVSGPPGGPAGYG 598
DA+G +GY N+WR+DPSQG GYG+ QV+GPPGGP GYG
Sbjct: 412 DASGGSGYPNSWRADPSQGVGYGSSQVNGPPGGPTGYG 449
>ref|XP_008802392.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Phoenix
dactylifera]
Length = 459
Score = 65.1 bits (157), Expect = 8e-09
Identities = 27/38 (71%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQG-GYGAGQVSGPPGGPAGYG 598
DA+G +GY N+WR+DPSQG GYG QV+GPPGGP GYG
Sbjct: 408 DASGGSGYPNSWRTDPSQGVGYGTSQVTGPPGGPTGYG 445
>ref|XP_009405917.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Musa
acuminata subsp. malaccensis]
Length = 463
Score = 64.3 bits (155), Expect = 1e-08
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQGG-YGAGQVSGPPGGPAGYG 598
DAN +GY NAWRSDPSQGG YGA V+GPPGGP YG
Sbjct: 412 DANAGSGYPNAWRSDPSQGGPYGASHVNGPPGGPVSYG 449
>ref|XP_009420757.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Musa
acuminata subsp. malaccensis]
Length = 463
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/36 (72%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +2
Query: 494 NGNTGYSNAWRSDPSQGG-YGAGQVSGPPGGPAGYG 598
N N+GY NAWR DPSQ G YGA QV+G PGGPA YG
Sbjct: 414 NANSGYPNAWRPDPSQAGPYGASQVNGAPGGPASYG 449
>gb|PKA55058.1| Heterogeneous nuclear ribonucleoprotein 1 [Apostasia shenzhenica]
Length = 438
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQGG-YGAGQVSGPPGGPAGY 595
D + N GYS+AWRS+P QGG YG GQVSGPP G GY
Sbjct: 387 DGSNNMGYSSAWRSEPGQGGAYGVGQVSGPPSGTTGY 423
>ref|XP_020692322.1| heterogeneous nuclear ribonucleoprotein 1-like [Dendrobium
catenatum]
gb|PKU72539.1| Heterogeneous nuclear ribonucleoprotein 1 [Dendrobium catenatum]
Length = 443
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/38 (71%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQ-GGYGAGQVSGPPGGPAGYG 598
D +GN GYSNAWR++P+Q GGYGAGQVS PGG GYG
Sbjct: 393 DGSGNAGYSNAWRAEPTQGGGYGAGQVSA-PGGTIGYG 429
>ref|XP_020578961.1| LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein 1-like
[Phalaenopsis equestris]
Length = 511
Score = 57.4 bits (137), Expect = 3e-06
Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 3/39 (7%)
Frame = +2
Query: 488 DANGNTGYSNAWRSDPSQ-GGYGAGQV--SGPPGGPAGY 595
D +G+TGYSNAWRSDP+Q GGYGAGQ+ +G PGG GY
Sbjct: 380 DGSGSTGYSNAWRSDPAQGGGYGAGQLAGAGAPGGAIGY 418
>dbj|GAV81395.1| RRM_1 domain-containing protein, partial [Cephalotus follicularis]
Length = 544
Score = 57.0 bits (136), Expect = 5e-06
Identities = 26/38 (68%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 488 DANGNTGYSNA-WRSDPSQGGYGAGQVSGPPGGPAGYG 598
DANGN+GY NA WRSD SQG YG Q +GP GG GYG
Sbjct: 493 DANGNSGYGNAAWRSDTSQGNYGNPQANGPHGGQTGYG 530