BLASTX nr result

ID: Ophiopogon24_contig00000826 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00000826
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276753.1| LOW QUALITY PROTEIN: heterogeneous nuclear r...    78   1e-13
ref|XP_008785173.1| PREDICTED: heterogeneous nuclear ribonucleop...    68   4e-10
ref|XP_020112516.1| heterogeneous nuclear ribonucleoprotein 1-li...    67   8e-10
ref|XP_010920312.1| PREDICTED: heterogeneous nuclear ribonucleop...    67   1e-09
ref|XP_008802392.1| PREDICTED: heterogeneous nuclear ribonucleop...    66   1e-09
ref|XP_009405917.1| PREDICTED: heterogeneous nuclear ribonucleop...    65   3e-09
ref|XP_009420757.1| PREDICTED: heterogeneous nuclear ribonucleop...    60   2e-07
ref|XP_020692322.1| heterogeneous nuclear ribonucleoprotein 1-li...    58   9e-07
dbj|GAV81395.1| RRM_1 domain-containing protein, partial [Cephal...    58   9e-07
gb|PKA55058.1| Heterogeneous nuclear ribonucleoprotein 1 [Aposta...    58   1e-06
ref|XP_010934253.1| PREDICTED: heterogeneous nuclear ribonucleop...    56   4e-06
ref|XP_020578961.1| LOW QUALITY PROTEIN: heterogeneous nuclear r...    56   6e-06
gb|EOY06149.1| RNA-binding family protein isoform 2 [Theobroma c...    55   8e-06
ref|XP_010264924.1| PREDICTED: heterogeneous nuclear ribonucleop...    55   8e-06
gb|EOY06148.1| RNA-binding family protein isoform 1 [Theobroma c...    55   8e-06
ref|XP_021290573.1| heterogeneous nuclear ribonucleoprotein 1 [H...    55   8e-06
gb|ONK79559.1| uncharacterized protein A4U43_C01F7610 [Asparagus...    55   9e-06
ref|XP_011041573.1| PREDICTED: glycine-rich cell wall structural...    54   1e-05

>ref|XP_020276753.1| LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein 1-like
           [Asparagus officinalis]
          Length = 466

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQGGYGAGQVSGPPGGPAGY 500
           DANGNSGYSN+WRSDPSQGGYGAGQV G PGGPAGY
Sbjct: 412 DANGNSGYSNSWRSDPSQGGYGAGQVGGQPGGPAGY 447


>ref|XP_008785173.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Phoenix
           dactylifera]
          Length = 468

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQG-GYGAGQVSGPPGGPAGYG 503
           DA+G SGY N+WR+DPSQG GYG  QV+GPPGGPAGYG
Sbjct: 417 DASGGSGYPNSWRADPSQGIGYGTSQVNGPPGGPAGYG 454


>ref|XP_020112516.1| heterogeneous nuclear ribonucleoprotein 1-like [Ananas comosus]
 gb|OAY70364.1| Heterogeneous nuclear ribonucleoprotein 1 [Ananas comosus]
          Length = 454

 Score = 67.0 bits (162), Expect = 8e-10
 Identities = 30/38 (78%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQ-GGYGAGQVSGPPGGPAGYG 503
           DANG+SGYSNAWRSDPSQ   YG+GQV+GP GGPA YG
Sbjct: 403 DANGSSGYSNAWRSDPSQAAAYGSGQVNGPAGGPANYG 440


>ref|XP_010920312.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Elaeis
           guineensis]
          Length = 463

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 28/38 (73%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQG-GYGAGQVSGPPGGPAGYG 503
           DA+G SGY N+WR+DPSQG GYG+ QV+GPPGGP GYG
Sbjct: 412 DASGGSGYPNSWRADPSQGVGYGSSQVNGPPGGPTGYG 449


>ref|XP_008802392.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Phoenix
           dactylifera]
          Length = 459

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQG-GYGAGQVSGPPGGPAGYG 503
           DA+G SGY N+WR+DPSQG GYG  QV+GPPGGP GYG
Sbjct: 408 DASGGSGYPNSWRTDPSQGVGYGTSQVTGPPGGPTGYG 445


>ref|XP_009405917.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Musa
           acuminata subsp. malaccensis]
          Length = 463

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 29/38 (76%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQGG-YGAGQVSGPPGGPAGYG 503
           DAN  SGY NAWRSDPSQGG YGA  V+GPPGGP  YG
Sbjct: 412 DANAGSGYPNAWRSDPSQGGPYGASHVNGPPGGPVSYG 449


>ref|XP_009420757.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Musa
           acuminata subsp. malaccensis]
          Length = 463

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
 Frame = +3

Query: 399 NGNSGYSNAWRSDPSQGG-YGAGQVSGPPGGPAGYG 503
           N NSGY NAWR DPSQ G YGA QV+G PGGPA YG
Sbjct: 414 NANSGYPNAWRPDPSQAGPYGASQVNGAPGGPASYG 449


>ref|XP_020692322.1| heterogeneous nuclear ribonucleoprotein 1-like [Dendrobium
           catenatum]
 gb|PKU72539.1| Heterogeneous nuclear ribonucleoprotein 1 [Dendrobium catenatum]
          Length = 443

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 27/38 (71%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQ-GGYGAGQVSGPPGGPAGYG 503
           D +GN+GYSNAWR++P+Q GGYGAGQVS  PGG  GYG
Sbjct: 393 DGSGNAGYSNAWRAEPTQGGGYGAGQVSA-PGGTIGYG 429


>dbj|GAV81395.1| RRM_1 domain-containing protein, partial [Cephalotus follicularis]
          Length = 544

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 27/38 (71%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNA-WRSDPSQGGYGAGQVSGPPGGPAGYG 503
           DANGNSGY NA WRSD SQG YG  Q +GP GG  GYG
Sbjct: 493 DANGNSGYGNAAWRSDTSQGNYGNPQANGPHGGQTGYG 530


>gb|PKA55058.1| Heterogeneous nuclear ribonucleoprotein 1 [Apostasia shenzhenica]
          Length = 438

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQGG-YGAGQVSGPPGGPAGY 500
           D + N GYS+AWRS+P QGG YG GQVSGPP G  GY
Sbjct: 387 DGSNNMGYSSAWRSEPGQGGAYGVGQVSGPPSGTTGY 423


>ref|XP_010934253.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Elaeis
           guineensis]
          Length = 459

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQG-GYGAGQVSGPPGGPAGYG 503
           DA+G SGY N+WR+DPSQG GYG GQV+GP G    YG
Sbjct: 412 DASGGSGYPNSWRTDPSQGMGYGTGQVNGPAGYGGAYG 449


>ref|XP_020578961.1| LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein 1-like
           [Phalaenopsis equestris]
          Length = 511

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 3/39 (7%)
 Frame = +3

Query: 393 DANGNSGYSNAWRSDPSQ-GGYGAGQV--SGPPGGPAGY 500
           D +G++GYSNAWRSDP+Q GGYGAGQ+  +G PGG  GY
Sbjct: 380 DGSGSTGYSNAWRSDPAQGGGYGAGQLAGAGAPGGAIGY 418


>gb|EOY06149.1| RNA-binding family protein isoform 2 [Theobroma cacao]
 gb|EOY06150.1| RNA-binding family protein isoform 2 [Theobroma cacao]
          Length = 463

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = +3

Query: 393 DANGNSGYSNA-WRSDPSQGG--YGAGQVSGPPGGPAGYG 503
           DANGNSGY NA WRSD SQG   YG  Q +GP GG AGYG
Sbjct: 410 DANGNSGYGNASWRSDSSQGSGNYGGTQANGPHGGQAGYG 449


>ref|XP_010264924.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Nelumbo
           nucifera]
          Length = 467

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/39 (69%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
 Frame = +3

Query: 393 DANGNSGYSNA-WRSDPSQGG-YGAGQVSGPPGGPAGYG 503
           DANGN GY NA WRSD SQ G YGA Q +GPP G  GYG
Sbjct: 415 DANGNPGYPNAAWRSDASQAGSYGAAQANGPPSGQVGYG 453


>gb|EOY06148.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 533

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = +3

Query: 393 DANGNSGYSNA-WRSDPSQGG--YGAGQVSGPPGGPAGYG 503
           DANGNSGY NA WRSD SQG   YG  Q +GP GG AGYG
Sbjct: 410 DANGNSGYGNASWRSDSSQGSGNYGGTQANGPHGGQAGYG 449


>ref|XP_021290573.1| heterogeneous nuclear ribonucleoprotein 1 [Herrania umbratica]
          Length = 552

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/40 (70%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = +3

Query: 393 DANGNSGYSNA-WRSDPSQGG--YGAGQVSGPPGGPAGYG 503
           DANGNSGY NA WRSD SQG   YG  Q +GP GG AGYG
Sbjct: 411 DANGNSGYGNASWRSDSSQGSGSYGGTQANGPHGGQAGYG 450


>gb|ONK79559.1| uncharacterized protein A4U43_C01F7610 [Asparagus officinalis]
          Length = 330

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +3

Query: 87  APTGGYVSGPPGAPRSPWNNQAPT 158
           APTGGY+S PPGAPRSPWNNQAPT
Sbjct: 295 APTGGYMSAPPGAPRSPWNNQAPT 318


>ref|XP_011041573.1| PREDICTED: glycine-rich cell wall structural protein 1.0-like
           [Populus euphratica]
          Length = 191

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = +3

Query: 393 DANGNSGYSNA-WRSDPSQ--GGYGAGQVSGPPGGPAGYG 503
           DANGNSGY NA WRS+ SQ  G YGA Q +GP GG  GYG
Sbjct: 138 DANGNSGYGNAAWRSEQSQASGNYGAPQANGPHGGQVGYG 177


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