BLASTX nr result

ID: Ophiopogon23_contig00042492 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00042492
         (592 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officina...    83   5e-15
ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officina...    83   5e-15

>ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officinalis]
          Length = 1186

 Score = 83.2 bits (204), Expect = 5e-15
 Identities = 52/105 (49%), Positives = 63/105 (60%)
 Frame = -1

Query: 316  LNPFSISDDKNSEHSLSVAIPPSENERXXXXXXXXXXXLKRSQHHPSSLEKEIVNPTSYF 137
            L+PF +S + NSEH LSV +PP ENE             KR QH P SLE E   PTS F
Sbjct: 982  LSPF-LSLEDNSEHCLSVQVPPLENETFHLDQLPSKL--KRPQHCPPSLEMETEKPTSTF 1038

Query: 136  SVISTPENESHQPEYKIPVGIAVEDYALDSDNLTVRMLDSMKQNK 2
             + ST E+ESHQ E K P G   EDYAL+ D+LT++ML+  K  K
Sbjct: 1039 FLGSTSESESHQCEDKFP-GAIEEDYALNQDSLTIQMLNGEKPKK 1082


>ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officinalis]
 gb|ONK62638.1| uncharacterized protein A4U43_C07F6270 [Asparagus officinalis]
          Length = 1187

 Score = 83.2 bits (204), Expect = 5e-15
 Identities = 52/105 (49%), Positives = 63/105 (60%)
 Frame = -1

Query: 316  LNPFSISDDKNSEHSLSVAIPPSENERXXXXXXXXXXXLKRSQHHPSSLEKEIVNPTSYF 137
            L+PF +S + NSEH LSV +PP ENE             KR QH P SLE E   PTS F
Sbjct: 983  LSPF-LSLEDNSEHCLSVQVPPLENETFHLDQLPSKL--KRPQHCPPSLEMETEKPTSTF 1039

Query: 136  SVISTPENESHQPEYKIPVGIAVEDYALDSDNLTVRMLDSMKQNK 2
             + ST E+ESHQ E K P G   EDYAL+ D+LT++ML+  K  K
Sbjct: 1040 FLGSTSESESHQCEDKFP-GAIEEDYALNQDSLTIQMLNGEKPKK 1083


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