BLASTX nr result

ID: Ophiopogon23_contig00042020 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00042020
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA55427.1| hypothetical protein AXF42_Ash006629 [Apostasia s...    55   5e-06

>gb|PKA55427.1| hypothetical protein AXF42_Ash006629 [Apostasia shenzhenica]
          Length = 593

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 38/104 (36%), Positives = 45/104 (43%)
 Frame = +3

Query: 12  PSSSAGGGEKPKQPPAKMVSVPAREKGVAVEASGVKXXXXXXXXXXXXXXXXXXXXXXXX 191
           P  S   G+KP Q PAKMVSVPA EK VAVE +G                          
Sbjct: 205 PVCSIATGDKPGQQPAKMVSVPATEKAVAVEIAGGIGLGPKRISPAGGLRNASPRCRSPA 264

Query: 192 XTSRVSNENAXXXXXXXXXXXXXXXXXXXCRRSPMTEIDDNSTR 323
            T+R+SNENA                    RR+PM EID+NS +
Sbjct: 265 NTTRISNENA--QPPSLSRNNSRKAEQSPLRRNPMAEIDENSLK 306


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