BLASTX nr result

ID: Ophiopogon23_contig00041742 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00041742
         (491 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK58907.1| uncharacterized protein A4U43_C08F950 [Asparagus ...   122   2e-32
ref|XP_008776369.1| PREDICTED: uncharacterized protein LOC103696...   100   9e-24

>gb|ONK58907.1| uncharacterized protein A4U43_C08F950 [Asparagus officinalis]
          Length = 162

 Score =  122 bits (306), Expect = 2e-32
 Identities = 72/161 (44%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
 Frame = -2

Query: 490 AGPSPVRPLIMLGTLALFLYGSDLMKLLLLVTEREDATIALLFTFPIVLLLTVHFTSEXX 311
           +GPSPV PL+++ TL LFLYG DL+KL  LV+E+EDAT++ LF  P++LLL VHF SE  
Sbjct: 3   SGPSPVSPLLLIATLGLFLYGPDLVKLSSLVSEKEDATVSPLFVIPLILLLMVHFVSEFI 62

Query: 310 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKSSS---GKMVSNQA--QGSDDRGEGVGL 146
                                        L KS S    K V NQ   Q S+  GEG+G 
Sbjct: 63  VIPLGLLLVVFLLRNILIGPLILMLGIHFLIKSYSVKFSKYVHNQVQPQESEGDGEGIGF 122

Query: 145 GCFILVLLFFILYSLFYEGEGYGYGWVSLILALTFVAFINM 23
           G F+ +LLF ++Y+LF  GE  GYGWVSL+L  +FVAF  +
Sbjct: 123 GFFMFMLLFVVVYNLF--GESEGYGWVSLVLVFSFVAFFKL 161


>ref|XP_008776369.1| PREDICTED: uncharacterized protein LOC103696492 [Phoenix
           dactylifera]
          Length = 162

 Score =  100 bits (249), Expect = 9e-24
 Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
 Frame = -2

Query: 487 GPSPVRPLIMLGTLALFLYGSDLMKLLLLVTEREDATIALLFTFPI--VLLLTVHFTSEX 314
           GPSPV+PL+++G L +F+Y  +LM  L L++E +++T+AL    PI  +LLL V F +E 
Sbjct: 4   GPSPVKPLLLVGALGMFIYWEELMNGLELISEMQESTLALAAILPIMIILLLIVLFMTEM 63

Query: 313 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGK---SSSGKMVSNQAQGSDDRGEGVGLG 143
                                         LGK       +    Q +     GEG GLG
Sbjct: 64  IVIPLLLLLVIFVLQNVMIGLLTLLVVIHLLGKYYHPPEPRTRWEQPESCGGEGEGNGLG 123

Query: 142 CFILVLLFFILYSLFYEGEGYGYGWVSLILALTFVAFINMF 20
            F+L++LF IL+++FY+GE  GYGW+SLIL L F  F NMF
Sbjct: 124 LFLLMILFLILFTVFYDGE--GYGWISLILVLGFTLFFNMF 162


Top