BLASTX nr result

ID: Ophiopogon23_contig00041579 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00041579
         (365 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270243.1| methylmalonyl-CoA epimerase, mitochondrial-l...    58   8e-08
gb|OAY69830.1| hypothetical protein ACMD2_26930 [Ananas comosus]       54   2e-06
ref|XP_020097247.1| uncharacterized protein LOC109716305 [Ananas...    54   3e-06

>ref|XP_020270243.1| methylmalonyl-CoA epimerase, mitochondrial-like [Asparagus
           officinalis]
 gb|ONK66599.1| uncharacterized protein A4U43_C06F10030 [Asparagus officinalis]
          Length = 192

 Score = 58.2 bits (139), Expect = 8e-08
 Identities = 34/62 (54%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = -1

Query: 365 CDNLPVIPLGVGEPVGICKRASLEXXXXXXXXXXXXXPMTVQQCHA-PVIHASEDSHNIS 189
           CDNLPVIPLGVGEPVG+CKR  L                   QCH+ P I  SEDSH IS
Sbjct: 135 CDNLPVIPLGVGEPVGLCKRVGL---IKQQQGQTQSQARKTVQCHSGPAIIVSEDSH-IS 190

Query: 188 CA 183
           CA
Sbjct: 191 CA 192


>gb|OAY69830.1| hypothetical protein ACMD2_26930 [Ananas comosus]
          Length = 166

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 32/61 (52%)
 Frame = -1

Query: 365 CDNLPVIPLGVGEPVGICKRASLEXXXXXXXXXXXXXPMTVQQCHAPVIHASEDSHNISC 186
           CDNLPVIPL VGEPV +CKR SL                + Q      +H SED HNI C
Sbjct: 110 CDNLPVIPLVVGEPVRLCKRVSL----MKQQQQQQQQQQSAQFLTPAAVHVSEDPHNIPC 165

Query: 185 A 183
           A
Sbjct: 166 A 166


>ref|XP_020097247.1| uncharacterized protein LOC109716305 [Ananas comosus]
          Length = 192

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 29/61 (47%), Positives = 32/61 (52%)
 Frame = -1

Query: 365 CDNLPVIPLGVGEPVGICKRASLEXXXXXXXXXXXXXPMTVQQCHAPVIHASEDSHNISC 186
           CDNLPVIPL VGEPV +CKR SL                + Q      +H SED HNI C
Sbjct: 136 CDNLPVIPLVVGEPVRLCKRVSL----MKQQQQQQQQQQSAQFLTPAAVHVSEDPHNIPC 191

Query: 185 A 183
           A
Sbjct: 192 A 192


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