BLASTX nr result

ID: Ophiopogon23_contig00041517 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00041517
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU19205.1| hypothetical protein TSUD_198880 [Trifolium subt...    57   1e-07

>dbj|GAU19205.1| hypothetical protein TSUD_198880 [Trifolium subterraneum]
          Length = 120

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
 Frame = -2

Query: 435 GRTTVSGLNFNPSFFI-LKKGSKACFLLPLLIDQGP 331
           GRTTVSGLNF+P FF+ + KGSKA FLLPLLIDQGP
Sbjct: 40  GRTTVSGLNFDPYFFLHIVKGSKARFLLPLLIDQGP 75


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