BLASTX nr result

ID: Ophiopogon23_contig00041507 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00041507
         (717 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB64603.1| hypothetical protein L484_017935 [Morus notabilis]      92   1e-17
gb|PLY70338.1| hypothetical protein LSAT_4X65980 [Lactuca sativa]      81   4e-14
ref|XP_023904979.1| uncharacterized protein LOC112016710 [Quercu...    77   1e-12
gb|KVH20950.1| Photosystem I PsaA/PsaB [Cynara cardunculus var. ...    71   2e-10
emb|CBJ23357.1| hypothetical protein (mitochondrion) [Beta vulga...    64   2e-08
emb|CAA71808.1| hypothetical protein (mitochondrion) [Beta vulga...    64   2e-08
ref|YP_009049717.1| hypothetical protein (mitochondrion) [Capsic...    59   7e-07

>gb|EXB64603.1| hypothetical protein L484_017935 [Morus notabilis]
          Length = 486

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 59/123 (47%), Positives = 75/123 (60%), Gaps = 9/123 (7%)
 Frame = -3

Query: 694 WTRSFC---SVECLLVELSADIDYIYKDLTEDGLLLSISCSRLVFIQQRIVCGLYVLSPL 524
           W  +F    S++ L   LSADID+IYKDL ED L  S+S  RL  IQQ+ V GLYVLSPL
Sbjct: 43  WNEAFLNSWSIDAL--PLSADIDFIYKDLMED-LQFSMSRYRLAVIQQKRVSGLYVLSPL 99

Query: 523 EMKIIKKVDLTQYLSEKLSDLPDIQFWTCADPA*IEVIIPSNKE------DGLVLMGLSR 362
           ++K IKK DLT +L + L D PDI   T +DP  I V++P  ++      DG V   +S 
Sbjct: 100 QLKFIKKEDLTPFLYDTLPDCPDIMLGTGSDPDMIYVVMPEKEDVKPLVGDGSVYKLISS 159

Query: 361 MLF 353
            LF
Sbjct: 160 FLF 162


>gb|PLY70338.1| hypothetical protein LSAT_4X65980 [Lactuca sativa]
          Length = 407

 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 44/108 (40%), Positives = 65/108 (60%)
 Frame = -3

Query: 661 LVELSADIDYIYKDLTEDGLLLSISCSRLVFIQQRIVCGLYVLSPLEMKIIKKVDLTQYL 482
           +V+LS DID++Y DL +     ++S   L  +QQ ++ G Y LSPL ++ I + DL ++L
Sbjct: 111 MVQLSEDIDFLYNDL-KSTQKYNLSKKELCNLQQILLSGFYTLSPLRLRRISRDDLLEFL 169

Query: 481 SEKLSDLPDIQFWTCADPA*IEVIIPSNKEDGLVLMGLSRMLFRLSYG 338
              L D PD+ F+   D +   V+ PS KED LV M LS   +RL+YG
Sbjct: 170 FATLPDFPDLTFYPSRDSSHYIVVFPSKKEDVLVFMALSIHFYRLTYG 217


>ref|XP_023904979.1| uncharacterized protein LOC112016710 [Quercus suber]
 gb|POE44791.1| putative 39 kda protein in mitochondrial s-1 and s-2 dna [Quercus
           suber]
          Length = 342

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
 Frame = -3

Query: 664 LLVELSADIDYIYKDLTEDGLLLSISCSRLVFIQQRIVCGLYVLSPLEMKIIKKVDLTQY 485
           +L+ LSADI ++Y ++ E+     I  +    + QRIV G Y+LSPL+MK I K DL ++
Sbjct: 46  VLLALSADIHFVYTNMIEEHDC--IPSAEYDLLHQRIVTGRYILSPLQMKFIFKKDLNKF 103

Query: 484 LSEKLSDLPDIQFWTCA-DPA*IEVIIPSNKEDGLVLMGLSRMLFRLSYGCL 332
           L   L+D PDI       DP  + VI+P +K+D  V MG S ML+R +YG L
Sbjct: 104 LLNTLADYPDIMLGVSPYDPVSLCVIMP-DKKDIFVYMGFSIMLYRFTYGRL 154


>gb|KVH20950.1| Photosystem I PsaA/PsaB [Cynara cardunculus var. scolymus]
          Length = 447

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/88 (43%), Positives = 56/88 (63%)
 Frame = -3

Query: 595 SISCSRLVFIQQRIVCGLYVLSPLEMKIIKKVDLTQYLSEKLSDLPDIQFWTCADPA*IE 416
           S+S   L  +QQ+I+ G YVLSPL+++ I K D+  Y+S   +++PD       DP+   
Sbjct: 162 SLSRYELTDLQQKILSGFYVLSPLDVQYISKEDIKLYISLMRTEIPDFMVLPSKDPSLFT 221

Query: 415 VIIPSNKEDGLVLMGLSRMLFRLSYGCL 332
            ++P  K+D LV MGLS ML+RLS+G L
Sbjct: 222 AVLP-EKKDVLVFMGLSIMLYRLSHGSL 248


>emb|CBJ23357.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 351

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 46/119 (38%), Positives = 62/119 (52%)
 Frame = -3

Query: 688 RSFCSVECLLVELSADIDYIYKDLTEDGLLLSISCSRLVFIQQRIVCGLYVLSPLEMKII 509
           R F +   L ++LS DI   Y  L  + LL S++  +L   QQ I  G Y L  LE    
Sbjct: 40  RDFSTCNSLQLQLSTDIYDTYHRLKSEDLLPSLTPFQLSMTQQEIENGHYRLGRLEYLSS 99

Query: 508 KKVDLTQYLSEKLSDLPDIQFWTCADPA*IEVIIPSNKEDGLVLMGLSRMLFRLSYGCL 332
              D+  +LS+ L D PD+  +T  +   + VI  S+ +D LVLMGLS  L RL YG L
Sbjct: 100 PSKDMMHFLSDILPDYPDV--YTYVNKTTVVVIKASDIKDSLVLMGLSVTLHRLIYGTL 156


>emb|CAA71808.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 351

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 46/119 (38%), Positives = 62/119 (52%)
 Frame = -3

Query: 688 RSFCSVECLLVELSADIDYIYKDLTEDGLLLSISCSRLVFIQQRIVCGLYVLSPLEMKII 509
           R F +   L ++LS DI   Y  L  + LL S++  +L   QQ I  G Y L  LE    
Sbjct: 40  RDFSTCNSLQLQLSTDIYDTYHRLKSEDLLPSLTPFQLSMTQQEIENGHYRLGRLEYLSS 99

Query: 508 KKVDLTQYLSEKLSDLPDIQFWTCADPA*IEVIIPSNKEDGLVLMGLSRMLFRLSYGCL 332
              D+  +LS+ L D PD+  +T  +   + VI  S+ +D LVLMGLS  L RL YG L
Sbjct: 100 PSKDMMHFLSDILPDYPDV--YTYVNKTTVVVIKASDIKDSLVLMGLSVTLHRLIYGTL 156


>ref|YP_009049717.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG89800.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG90075.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|PHT70248.1| hypothetical protein T459_25352 [Capsicum annuum]
          Length = 187

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 35/84 (41%), Positives = 46/84 (54%)
 Frame = -3

Query: 598 LSISCSRLVFIQQRIVCGLYVLSPLEMKIIKKVDLTQYLSEKLSDLPDIQFWTCADPA*I 419
           + +   RL  +Q  I+ G YVLSPLE+K +   DL  +L   + + P+           I
Sbjct: 1   MDMPLDRLFHMQNLIIRGGYVLSPLEIKRVMGRDLRDFLKGLIPERPEFMITGGGGEDII 60

Query: 418 EVIIPSNKEDGLVLMGLSRMLFRL 347
            VI+PS KED LVLMGLS  L RL
Sbjct: 61  HVIMPSRKEDALVLMGLSITLLRL 84


Top