BLASTX nr result
ID: Ophiopogon23_contig00040323
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00040323
(667 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZV32632.1| putative LRR receptor-like serine/threonine-prote... 125 1e-33
gb|PKA50578.1| Retrovirus-related Pol polyprotein from transposo... 128 1e-33
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 126 5e-33
gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposo... 126 5e-33
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo... 126 5e-33
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo... 126 5e-33
ref|WP_105280124.1| hypothetical protein [Escherichia coli] >gi|... 127 8e-33
ref|XP_019157474.1| PREDICTED: lignin-forming anionic peroxidase... 132 2e-32
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen... 125 2e-32
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 124 7e-32
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 125 3e-31
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 120 3e-31
gb|KYP62382.1| Retrovirus-related Pol polyprotein from transposo... 121 3e-31
ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038... 127 4e-31
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 120 4e-31
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 120 4e-31
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 117 6e-31
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo... 118 7e-31
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 129 8e-31
dbj|GAU51472.1| hypothetical protein TSUD_95870 [Trifolium subte... 120 1e-30
>gb|KZV32632.1| putative LRR receptor-like serine/threonine-protein kinase
[Dorcoceras hygrometricum]
Length = 213
Score = 125 bits (315), Expect(2) = 1e-33
Identities = 66/151 (43%), Positives = 102/151 (67%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT L L + + P IL+GY DA+ AGD++ +ST+G++ A VS +++LQ
Sbjct: 40 LKGTTKLCLCYGEANP----ILEGYTDADMAGDIDSRKSTSGFIYTFAGGAVSWQSRLQK 95
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
VALSTTEA+Y+ E KE LWLK ++ F I Q ++HCDSQS + L+K MYH +T
Sbjct: 96 CVALSTTEAKYIAVAEAGKEMLWLKRYLQEFGIKQRDYKVHCDSQSALDLSKNSMYHSRT 155
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ D++ H I + +++++++LVKI+TK+NP
Sbjct: 156 KHIDIRYHWIRE-VMDRQLLRLVKIHTKENP 185
Score = 46.2 bits (108), Expect(2) = 1e-33
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +3
Query: 108 IVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL 209
+VC R D+AY + VS F+SN GK+HW+AVK +L
Sbjct: 4 MVCTRPDIAYAVGMVSRFLSNPGKEHWEAVKWIL 37
>gb|PKA50578.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 188
Score = 128 bits (322), Expect = 1e-33
Identities = 67/150 (44%), Positives = 100/150 (66%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT+ GL+F+K ++L GY D++YAGDL+K RSTT ++ + + +S K LQ+
Sbjct: 19 LKGTSDCGLLFEK--NLNSDLLVGYVDSDYAGDLDKRRSTTEFIFTLGEGPISWKATLQN 76
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
IVALS E EY+T +E +K+ WLK LVK I Q + +HCDSQS I L K+ ++H +T
Sbjct: 77 IVALSIIEVEYITAVEAAKKVAWLKDLVKELSISQKIISLHCDSQSAIYLVKDPIFHART 136
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKN 663
KY D++ HK+ + + IKLVK++T+ N
Sbjct: 137 KYIDIRYHKLRE-LVSSDDIKLVKVSTQDN 165
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 126 bits (317), Expect(2) = 5e-33
Identities = 68/151 (45%), Positives = 97/151 (64%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT+ +GLVF + K N+ G+ D++Y GDL++ RS +GY+ + +S K LQ
Sbjct: 859 LKGTSNIGLVFDRNKATTNNVA-GFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQS 917
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
I ALSTTEAEY++ E KEALW++GLVK + QD + + CDSQS I L K YH +T
Sbjct: 918 IAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKT 977
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DVK+H I +V+ L K++T +NP
Sbjct: 978 KHIDVKHHFIRDIVTIGEVL-LQKVHTSENP 1007
Score = 43.1 bits (100), Expect(2) = 5e-33
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK 200
GS +VC R D+AY +S VS ++ N GK HW AVK
Sbjct: 817 GSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVK 853
>gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 865
Score = 126 bits (317), Expect(2) = 5e-33
Identities = 68/151 (45%), Positives = 97/151 (64%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT+ +GLVF + K N+ G+ D++Y GDL++ RS +GY+ + +S K LQ
Sbjct: 692 LKGTSNIGLVFDRNKATTNNVA-GFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQS 750
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
I ALSTTEAEY++ E KEALW++GLVK + QD + + CDSQS I L K YH +T
Sbjct: 751 IAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKT 810
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DVK+H I +V+ L K++T +NP
Sbjct: 811 KHIDVKHHFIRDIVTIGEVL-LQKVHTSENP 840
Score = 43.1 bits (100), Expect(2) = 5e-33
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK 200
GS +VC R D+AY +S VS ++ N GK HW AVK
Sbjct: 650 GSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVK 686
>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 126 bits (317), Expect(2) = 5e-33
Identities = 68/151 (45%), Positives = 97/151 (64%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT+ +GLVF + K N+ G+ D++Y GDL++ RS +GY+ + +S K LQ
Sbjct: 330 LKGTSNIGLVFDRNKATTNNVA-GFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQS 388
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
I ALSTTEAEY++ E KEALW++GLVK + QD + + CDSQS I L K YH +T
Sbjct: 389 IAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKT 448
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DVK+H I +V+ L K++T +NP
Sbjct: 449 KHIDVKHHFIRDIVTIGEVL-LQKVHTSENP 478
Score = 43.1 bits (100), Expect(2) = 5e-33
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK 200
GS +VC R D+AY +S VS ++ N GK HW AVK
Sbjct: 288 GSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVK 324
>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 126 bits (317), Expect(2) = 5e-33
Identities = 68/151 (45%), Positives = 97/151 (64%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT+ +GLVF + K N+ G+ D++Y GDL++ RS +GY+ + +S K LQ
Sbjct: 221 LKGTSNIGLVFDRNKATTNNVA-GFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQS 279
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
I ALSTTEAEY++ E KEALW++GLVK + QD + + CDSQS I L K YH +T
Sbjct: 280 IAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKT 339
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DVK+H I +V+ L K++T +NP
Sbjct: 340 KHIDVKHHFIRDIVTIGEVL-LQKVHTSENP 369
Score = 43.1 bits (100), Expect(2) = 5e-33
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK 200
GS +VC R D+AY +S VS ++ N GK HW AVK
Sbjct: 179 GSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVK 215
>ref|WP_105280124.1| hypothetical protein [Escherichia coli]
gb|PPY92730.1| hypothetical protein C5P31_25790 [Escherichia coli]
Length = 326
Score = 127 bits (319), Expect(2) = 8e-33
Identities = 72/150 (48%), Positives = 99/150 (66%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
+ T +GLVF++ + + GY D+++AGDL+K RSTTGYV AK VS K+ LQ
Sbjct: 168 IHNTVDVGLVFEQ---EDNQSVVGYCDSDFAGDLDKRRSTTGYVFTFAKAPVSWKSTLQS 224
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
VALSTTEAEYM E KEA+WL+GL+K + Q S+ I CDSQS I LAK +YH +T
Sbjct: 225 TVALSTTEAEYMAITEAVKEAIWLQGLLKELGVEQKSITIFCDSQSAIQLAKNQVYHART 284
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKN 663
K+ DV+ H + + +E+ I + KI+T +N
Sbjct: 285 KHIDVRYHFVRE-IIEEGGITVKKIHTTEN 313
Score = 41.6 bits (96), Expect(2) = 8e-33
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 81 NYSGSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL 209
N GS +VC R D++ + +S ++ N GK+HW+AVK +L
Sbjct: 123 NVVGSLMYAMVCTRPDISQAVGVISRYMHNPGKEHWQAVKWIL 165
>ref|XP_019157474.1| PREDICTED: lignin-forming anionic peroxidase-like [Ipomoea nil]
Length = 475
Score = 132 bits (331), Expect = 2e-32
Identities = 70/147 (47%), Positives = 98/147 (66%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT G+VF + ++L GY D++YAGD++ RSTTGYV + + ++ +Q
Sbjct: 19 LRGTMEHGIVFGS--QQNEHVLMGYVDSDYAGDMDNRRSTTGYVFTLGGGPICWRSSVQS 76
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
IVALSTTEAEYM E +KEALWL GL+K I QD VQ+HCD+QS I LAK +YH +T
Sbjct: 77 IVALSTTEAEYMAVTEAAKEALWLSGLIKELGIEQDGVQLHCDNQSAIFLAKNQVYHART 136
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINT 654
K+ DV+ HK+ + +++ L KI+T
Sbjct: 137 KHIDVRFHKVREFVASGEIL-LQKIHT 162
>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 502
Score = 125 bits (314), Expect(2) = 2e-32
Identities = 71/150 (47%), Positives = 98/150 (65%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT LG++F++ ++ + G+ DA+YAGDL+K RSTTGYV VS K+ LQ
Sbjct: 330 LKGTRQLGIMFER--KQEVACVAGFVDADYAGDLDKRRSTTGYVFTCGGGPVSWKSTLQA 387
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
+ ALSTTEAEYM E SKEA+WL GL F I Q+ V + CDSQS I LAK ++H +T
Sbjct: 388 VTALSTTEAEYMALTEASKEAIWLNGLASEFGIHQEGVVVKCDSQSAIHLAKNQVFHART 447
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKN 663
K+ DV+ H+I + +E I + K++T N
Sbjct: 448 KHIDVRYHRI-RDWVESGNIIVEKVHTNDN 476
Score = 42.0 bits (97), Expect(2) = 2e-32
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +3
Query: 108 IVCIRHDVAYVISTVSPFISNLGKQHWKAVK*V---LCSTRDCGI 233
++C R D+A +S VS ++SN GK HW+AVK + L TR GI
Sbjct: 294 MICTRPDLAQALSVVSKYMSNPGKPHWEAVKWILRYLKGTRQLGI 338
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 124 bits (312), Expect(2) = 7e-32
Identities = 69/147 (46%), Positives = 95/147 (64%)
Frame = +1
Query: 223 TAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQDIVA 402
T +GL+F K + GY D++YAGDL+K RSTTGYV +A +S K+ LQ VA
Sbjct: 851 TMDIGLLF-KQDTTLGKCVVGYVDSDYAGDLDKRRSTTGYVFTLAGGPISWKSTLQSTVA 909
Query: 403 LSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQTKYN 582
LSTTEAEYM E KEA+WL+G+VK ++Q+ ++CDSQS I LAK +YH +TK+
Sbjct: 910 LSTTEAEYMAVTEAVKEAIWLQGMVKTLGLVQEHFNVYCDSQSAIHLAKNQVYHARTKHI 969
Query: 583 DVKNHKIGK*SLEKKVIKLVKINTKKN 663
DV+ H + + +++ I L KI T N
Sbjct: 970 DVRFHFVRE-IIDEGKIHLQKIKTADN 995
Score = 41.2 bits (95), Expect(2) = 7e-32
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 81 NYSGSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL 209
N GS +VC R D++ +S VS ++ N GK HW+AVK +L
Sbjct: 803 NAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWIL 845
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 125 bits (314), Expect = 3e-31
Identities = 69/151 (45%), Positives = 99/151 (65%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L GT +GL+F+K ++ GY D+++AGDL+K RST+GYV + VS ++ LQ
Sbjct: 125 LYGTVDVGLLFKKNCGQQ---CVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQS 181
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
+ALSTTEAEY+ E KEA+WLKGL+ +IQ+++ + CD+QS I LAK YH +T
Sbjct: 182 TIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHART 241
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DVK H + + +E + L KI+TK NP
Sbjct: 242 KHIDVKYHYVRE-IIEGGDVLLKKIDTKDNP 271
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 120 bits (302), Expect(2) = 3e-31
Identities = 60/130 (46%), Positives = 85/130 (65%)
Frame = +1
Query: 277 LQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQDIVALSTTEAEYMTTIETSKEA 456
L GY D++YA DL++ RS TGYV + VS + LQ +VALSTTEAEYM E KE
Sbjct: 1181 LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKEL 1240
Query: 457 LWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQTKYNDVKNHKIGK*SLEKKVIK 636
+WLKGL ++ + +HCDSQS I L K+ M+H++TK+ D+K H + + +E+ +K
Sbjct: 1241 IWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFV-RDVIEEGKLK 1299
Query: 637 LVKINTKKNP 666
+ KI+T NP
Sbjct: 1300 VCKISTHDNP 1309
Score = 42.7 bits (99), Expect(2) = 3e-31
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK 200
GS +VC R D++Y +S VS ++SN GK+HW+AV+
Sbjct: 1122 GSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQ 1158
>gb|KYP62382.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 316
Score = 121 bits (303), Expect(2) = 3e-31
Identities = 68/151 (45%), Positives = 94/151 (62%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GTA +GL+++ L GY+DA+YA DL+K RS TGY + +VS K LQ
Sbjct: 147 LKGTADVGLIYESSSDCP---LAGYSDADYAADLDKRRSLTGYAYTLGSCLVSWKATLQP 203
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
VALSTTEAEYM E +KE +WL+GL+ I Q+ I+CDS S I L K+ ++H +T
Sbjct: 204 SVALSTTEAEYMALTEAAKEGIWLRGLISDLGINQEHADIYCDSLSAICLTKDQVHHDRT 263
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DV+ H I ++ IK+ KI+T NP
Sbjct: 264 KHIDVRYHFI----RSERRIKVHKISTLHNP 290
Score = 42.4 bits (98), Expect(2) = 3e-31
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*V---LCSTRDCGI 233
GS +VC R D+AY +S VS F++ K+HWKA K + L T D G+
Sbjct: 105 GSLMYAMVCTRPDLAYAVSMVSRFLNQPHKEHWKATKRIFRYLKGTADVGL 155
>ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038071 [Elaeis guineensis]
Length = 397
Score = 127 bits (319), Expect = 4e-31
Identities = 72/150 (48%), Positives = 99/150 (66%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
++GT+ LGL+F + I+ G+ D++YA DL++ RS TGYV ++ VS K LQ
Sbjct: 226 IKGTSKLGLIFTA---QSNCIVTGFCDSDYACDLDRRRSLTGYVFTLSGCAVSWKATLQS 282
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
I ALSTTEAEYM E KEA+WLKGLV+ + QD + IHCDSQS + LA++ MYH++T
Sbjct: 283 IFALSTTEAEYMALTEAEKEAIWLKGLVQDLDLEQDCLDIHCDSQSALHLARDQMYHERT 342
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKN 663
K DV+ H I + +EK ++L KI T N
Sbjct: 343 KQVDVRYHFI-RDLVEKGDVRLQKIYTAYN 371
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 120 bits (302), Expect(2) = 4e-31
Identities = 68/151 (45%), Positives = 95/151 (62%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+G+A L LV+ + + + GY D++YAGDL+K RS TGYV + +S K LQ
Sbjct: 1649 LRGSADLCLVYDQ--SDCTSSVTGYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQS 1706
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
VALSTTEAEYM E KEALW+KGLV + QD + CDSQS I L K M+H++T
Sbjct: 1707 TVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMFHERT 1766
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DV+ H + + + ++ + K+ T+KNP
Sbjct: 1767 KHIDVRYHFVREHVTQGDIV-ISKVATEKNP 1796
Score = 42.4 bits (98), Expect(2) = 4e-31
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL 209
GS +VC R D+++ +S VS ++S GK+HW+AVK +L
Sbjct: 1607 GSVMYAMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWIL 1646
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 120 bits (302), Expect(2) = 4e-31
Identities = 68/151 (45%), Positives = 95/151 (62%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+G+A L LV+ + + + GY D++YAGDL+K RS TGYV + +S K LQ
Sbjct: 1670 LRGSADLCLVYDQ--SDCTSSVTGYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQS 1727
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
VALSTTEAEYM E KEALW+KGLV + QD + CDSQS I L K M+H++T
Sbjct: 1728 TVALSTTEAEYMALAEAVKEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMFHERT 1787
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DV+ H + + + ++ + K+ T+KNP
Sbjct: 1788 KHIDVRYHFVREHVTQGDIV-ISKVATEKNP 1817
Score = 42.4 bits (98), Expect(2) = 4e-31
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL 209
GS +VC R D+++ +S VS ++S GK+HW+AVK +L
Sbjct: 1628 GSVMYAMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWIL 1667
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
Length = 1328
Score = 117 bits (293), Expect(2) = 6e-31
Identities = 65/151 (43%), Positives = 97/151 (64%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT G L F P IL+GY DA+ AGD++ +S+TGY+ + +S ++KLQ
Sbjct: 1158 LRGTTGDCLCFGGSDP----ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQK 1213
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
VALSTTEAEY+ ET KE +WLK ++ + Q ++CDSQS I L+K MYH +T
Sbjct: 1214 CVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHART 1273
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ DV+ H I + ++ + +K++KI+T +NP
Sbjct: 1274 KHIDVRYHWIRE-MVDDESLKVLKISTNENP 1303
Score = 45.4 bits (106), Expect(2) = 6e-31
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL----CSTRDC 227
GS +VC R D+A+ + VS F+ N GK+HW+AVK +L +T DC
Sbjct: 1116 GSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDC 1165
>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 118 bits (295), Expect(2) = 7e-31
Identities = 64/150 (42%), Positives = 99/150 (66%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L+GT+ L L F KP IL+GY DA+ AGDL+ +ST+GY+ + +S ++KLQ
Sbjct: 1152 LRGTSKLCLRFGGAKP----ILEGYTDADMAGDLDDRKSTSGYIFTFSGGAISWQSKLQK 1207
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
++LSTTEAEY+ E KE LW+K ++ + Q+ ++CDSQS + L+K MYH +T
Sbjct: 1208 CISLSTTEAEYVAATEAGKEMLWMKKFLQELGLKQEEYIVYCDSQSALDLSKNTMYHSRT 1267
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKN 663
K+ DV+ H I + ++EK++ +L KI+T +N
Sbjct: 1268 KHIDVRYHWI-RLAIEKQLFQLKKIHTDRN 1296
Score = 44.3 bits (103), Expect(2) = 7e-31
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL 209
GS +VC R D+A+ + VS ++SN GK HW+AVK +L
Sbjct: 1110 GSLMYAMVCTRPDIAHAVGVVSRYLSNPGKTHWEAVKWIL 1149
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 129 bits (325), Expect = 8e-31
Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 1/222 (0%)
Frame = +1
Query: 4 GHFMFFLRQCLQSP*EDEETSRVPYAITVXXXXXXXXXXXXXXXX*LVQ*VRLYQI*ESN 183
GHF R + E ++PYA V L L SN
Sbjct: 440 GHFKLSTRMSPMTDEEKVSVEKIPYASAVDSLMYAMVCTRLN----LAYSASLVSRFMSN 495
Query: 184 IGKQ*NECYV-LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAK 360
GK+ E +QG + +GL++++++ L+GY DA++AGDL+K RS +GY+ +
Sbjct: 496 SGKEHWEAVKWVQGASNVGLLYKRMRNDGEK-LRGYVDADFAGDLDKRRSLSGYIFTLFG 554
Query: 361 YVVSCKTKLQDIVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVII 540
VS K +LQ +VALSTTEAEY+ E KEA+WLKGL+ I+QD V++ CD+QS I+
Sbjct: 555 CTVSWKAQLQLVVALSTTEAEYIAATEGVKEAMWLKGLIGELGIVQDEVEVFCDNQSSIL 614
Query: 541 LAKEHMYHKQTKYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
L K M++ +TK+ D+K H I + + + + L KI+T NP
Sbjct: 615 LTKNQMFYDRTKHIDIKLHFI-RDIISRGTVTLEKIHTDDNP 655
>dbj|GAU51472.1| hypothetical protein TSUD_95870 [Trifolium subterraneum]
Length = 1682
Score = 120 bits (300), Expect(2) = 1e-30
Identities = 64/151 (42%), Positives = 100/151 (66%)
Frame = +1
Query: 214 LQGTAGLGLVFQKLKPKKPNILQGYADANYAGDLNKWRSTTGYVSMVAKYVVSCKTKLQD 393
L G+ GL ++K+ P K + L+GY DA+Y G+++ +S +G+V + V+ K Q
Sbjct: 1080 LNGSLKGGLRYKKIDPGK-DALEGYVDADYVGNVDTRKSLSGFVFTLFGTAVTWKANQQS 1138
Query: 394 IVALSTTEAEYMTTIETSKEALWLKGLVKIFRIIQDSVQIHCDSQSVIILAKEHMYHKQT 573
+VALSTT+AEY+ +E KEA+WLKG++ I Q V+IHCDSQSVI LA +YH++T
Sbjct: 1139 VVALSTTQAEYIALVEGVKEAIWLKGMIGEMGISQGCVKIHCDSQSVIHLANHQVYHERT 1198
Query: 574 KYNDVKNHKIGK*SLEKKVIKLVKINTKKNP 666
K+ D++ H + + +E K I + K+ +K+NP
Sbjct: 1199 KHIDIRLHFV-RDMIETKEIIVEKVASKENP 1228
Score = 41.6 bits (96), Expect(2) = 1e-30
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 90 GSTHVIIVCIRHDVAYVISTVSPFISNLGKQHWKAVK*VL 209
GS +VC R D++Y IS VS F++N G+ HW+A+K VL
Sbjct: 1038 GSIMYGMVCSRPDLSYAISVVSRFMANPGQVHWQALKWVL 1077