BLASTX nr result

ID: Ophiopogon23_contig00040237 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00040237
         (600 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022755662.1| serrate RNA effector molecule-like [Durio zi...    42   8e-07
ref|XP_020580356.1| serrate RNA effector molecule [Phalaenopsis ...    46   3e-06

>ref|XP_022755662.1| serrate RNA effector molecule-like [Durio zibethinus]
          Length = 739

 Score = 42.0 bits (97), Expect(2) = 8e-07
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = -1

Query: 408 YLEYCSGYISTQKRAYLEAHKDEE 337
           Y EY S YISTQKRAY E+HKDEE
Sbjct: 221 YQEYKSEYISTQKRAYFESHKDEE 244



 Score = 38.9 bits (89), Expect(2) = 8e-07
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query: 598 EPRPHPSPPAYPKKSWKDGHGCNTWHGGSRDSDG-QLKHLISIRKFVKRLEVDILPVEAE 422
           E RPH      P   ++D       +GG+ +S   Q + L+S ++F++ LE DILP EAE
Sbjct: 159 EERPHSRYFGRPSSGYQDWDSGRGGYGGASNSGSTQREGLMSYKQFIQELEDDILPAEAE 218


>ref|XP_020580356.1| serrate RNA effector molecule [Phalaenopsis equestris]
          Length = 568

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
 Frame = -1

Query: 408 YLEYCSGYISTQKRAYLEAHKDEE-*KERH---NNADHFQKIN*GMDVVITESVTGLTEL 241
           Y EY + YISTQKRAY EAHKDEE  K+++   N     ++ N        E +  L   
Sbjct: 48  YEEYRTEYISTQKRAYFEAHKDEEWLKDKYHPTNLVTVIERRNENARAAAKEILLDLQSG 107

Query: 240 TVKAGIVSYTEKIPFRDIPASSGGPEPKKDAYGAQRSHG 124
           T+  G  S T     +   AS    E + D  G +R HG
Sbjct: 108 TLDLG-PSLTSSTSNKSGNASDPNSEDEPDVSGKRRRHG 145



 Score = 33.1 bits (74), Expect(2) = 3e-06
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -3

Query: 532 NTWHGGSRDSDGQLKHLISIRKFVKRLEVDILPVEAE 422
           +T  GG   S  Q + L++ ++F++ LE DILP EAE
Sbjct: 9   DTGRGGFDGSQPQREGLMTYKQFIQELEDDILPAEAE 45


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