BLASTX nr result

ID: Ophiopogon23_contig00039508 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00039508
         (572 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272188.1| uncharacterized protein LOC109847370 [Aspara...    72   3e-11
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    72   4e-11
gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officin...    65   5e-10
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...    69   5e-10
gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagu...    68   5e-10
gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagu...    63   2e-08
gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagu...    60   4e-07
gb|ONK78461.1| uncharacterized protein A4U43_C02F19020 [Asparagu...    57   4e-06

>ref|XP_020272188.1| uncharacterized protein LOC109847370 [Asparagus officinalis]
          Length = 611

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = +3

Query: 297 RIMENMGYDISRNEGLNFGKGPRTPLRPFAPKGKSDDYYHQMRRGLGYASSSSEQYNESG 476
           RIM+ +GY  S   GLNFGKG RTPL PF PKGK D+YY + R+GLGY S    Q  E+ 
Sbjct: 3   RIMQKIGYYFSNAGGLNFGKGQRTPLAPFVPKGKPDNYYDKTRKGLGYVSPPLVQCFEAS 62

Query: 477 K 479
           +
Sbjct: 63  E 63


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +3

Query: 252 NEAASQFSHYGQVSCRIMENMGYDISRNEGLNFGKGPRTPLR-PFAPKGKSDDYYHQMRR 428
           ++   QF ++   S ++M+ MGY+ +   GLNFGKG RTP+R   AP+GK  DYYH+ R 
Sbjct: 463 DDGVPQFHYHEPNSIQLMKRMGYNFNEKRGLNFGKGRRTPVRMSLAPEGKPQDYYHKTRS 522

Query: 429 GLGYASSSSEQYNE 470
           GLGY ++ S   +E
Sbjct: 523 GLGYVTTPSASEDE 536


>gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officinalis]
          Length = 125

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = +3

Query: 300 IMENMGYDISRNEGLNFGKGPRTPLR-PFAPKGKSDDYYHQMRRGLGYAS 446
           +M+ +GYD +R EGLNFGKG + P++  + P+GK +DYYH+  RGLGY S
Sbjct: 4   LMKKIGYDFTRKEGLNFGKGRKIPIKHVYVPEGKPEDYYHKTHRGLGYES 53


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
 Frame = +3

Query: 159 PTPNYGQMLIVHVGLWKG-GSSLANTLVRFIRNE--AASQFSHYGQVSCRIMENMGYDIS 329
           PT   GQ  +V+    KG G  L +  +R   N+       S Y   + ++ME  GYD +
Sbjct: 262 PTKIGGQREVVY---GKGEGFPLPDHFLREDENDDKPGRHLSKYSPEARKLMEKQGYDFT 318

Query: 330 RNEGLNFGKGPRTPLRP-FAPKGKSDDYYHQMRRGLGYASSSSEQY 464
             EGL F +GPR P +  + PKGK DDYY + RRGLGY SSS ++Y
Sbjct: 319 LGEGLYFDRGPRIPAKAAYVPKGKPDDYY-KFRRGLGYESSSEDEY 363


>gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagus officinalis]
          Length = 427

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 29/54 (53%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = +3

Query: 300 IMENMGYDISRNEGLNFGKGPRTPLRP-FAPKGKSDDYYHQMRRGLGYASSSSE 458
           +M +MGYD++R EGLN+G+G +T ++P + PKGK  +Y+++ RRGLGY+SSSS+
Sbjct: 1   MMSDMGYDLTRLEGLNYGRGRKTVIKPAYVPKGKPSNYFNRTRRGLGYSSSSSD 54


>gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagus officinalis]
          Length = 254

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = +3

Query: 252 NEAASQFSHYGQVSCRIMENMGYDISRNEGLNFGKGPRTPLR-PFAPKGKSDDYYHQMRR 428
           ++ A     Y   +  ++E  GYD +  EGL FG+GPR P R  + PKGK DDYY   +R
Sbjct: 72  DKPAPHLFRYDAKARDLVEKYGYDFTLGEGLFFGRGPRVPPRLAYVPKGKPDDYYRH-KR 130

Query: 429 GLGYASSSSEQ 461
           GLGY SSS ++
Sbjct: 131 GLGYVSSSDDE 141


>gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagus officinalis]
          Length = 1510

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +3

Query: 273  SHYGQVSCRIMENMGYDISRNEGLNFGKGPRTPLRP-FAPKGKSDDYYHQMRRGLGYASS 449
            S Y   + ++ME  GYD +  EGL F +GPR P +  + PKGK +DYY +  RGLGY SS
Sbjct: 1163 SKYSPEARKLMEKQGYDFTLGEGLYFDRGPRNPAKAVYVPKGKPEDYY-KYGRGLGYVSS 1221

Query: 450  SSE 458
              E
Sbjct: 1222 DDE 1224


>gb|ONK78461.1| uncharacterized protein A4U43_C02F19020 [Asparagus officinalis]
          Length = 1090

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +3

Query: 303  MENMGYDISRNEGLNFGKGPRTPLRP-FAPKGKSDDYYHQMRRGLGYASSSSEQYNE 470
            M + GY++S  EGL+FG+G R P RP + PK + D+YY   +RGLGY S S ++Y +
Sbjct: 886  MTSQGYNLSLGEGLHFGQGVRVPPRPVYVPKWRPDNYYSH-KRGLGYTSLSDDEYGQ 941


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