BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00039215
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251441.1| pentatricopeptide repeat-containing protein ...   106   5e-24
ref|XP_020573314.1| pentatricopeptide repeat-containing protein ...    92   5e-19
ref|XP_010925750.1| PREDICTED: pentatricopeptide repeat-containi...    90   3e-18
ref|XP_017696777.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    86   7e-17
gb|PKA54080.1| Pentatricopeptide repeat-containing protein [Apos...    84   6e-16
ref|XP_020674218.1| pentatricopeptide repeat-containing protein ...    82   3e-15
ref|XP_020674215.1| pentatricopeptide repeat-containing protein ...    82   3e-15
ref|XP_020674193.1| pentatricopeptide repeat-containing protein ...    82   3e-15
ref|XP_018679504.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-14
ref|XP_020256590.1| pentatricopeptide repeat-containing protein ...    69   8e-11
gb|ONK74770.1| uncharacterized protein A4U43_C03F9970 [Asparagus...    69   8e-11
ref|XP_008803207.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-10
ref|XP_010930804.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-10
ref|XP_020102406.1| pentatricopeptide repeat-containing protein ...    65   1e-09
gb|PKA49430.1| Pentatricopeptide repeat-containing protein [Apos...    65   2e-09
ref|XP_023513230.1| pentatricopeptide repeat-containing protein ...    64   3e-09
ref|XP_022943886.1| pentatricopeptide repeat-containing protein ...    64   3e-09
gb|OVA09640.1| Pentatricopeptide repeat [Macleaya cordata]             64   3e-09
ref|XP_022985795.1| pentatricopeptide repeat-containing protein ...    64   4e-09
ref|XP_022140267.1| pentatricopeptide repeat-containing protein ...    61   4e-08

>ref|XP_020251441.1| pentatricopeptide repeat-containing protein At5g39710-like
           [Asparagus officinalis]
 ref|XP_020251442.1| pentatricopeptide repeat-containing protein At5g39710-like
           [Asparagus officinalis]
 ref|XP_020251443.1| pentatricopeptide repeat-containing protein At5g39710-like
           [Asparagus officinalis]
 ref|XP_020251444.1| pentatricopeptide repeat-containing protein At5g39710-like
           [Asparagus officinalis]
 ref|XP_020251445.1| pentatricopeptide repeat-containing protein At5g39710-like
           [Asparagus officinalis]
 ref|XP_020251446.1| pentatricopeptide repeat-containing protein At5g39710-like
           [Asparagus officinalis]
 gb|ONK81189.1| uncharacterized protein A4U43_C01F26280 [Asparagus officinalis]
          Length = 503

 Score =  106 bits (264), Expect = 5e-24
 Identities = 70/147 (47%), Positives = 85/147 (57%), Gaps = 20/147 (13%)
 Frame = +1

Query: 40  TPKLPSLFRKF-------TNNFSSYH-QTHHQIKSHLNSGDVNXXXXXXXXXXXXXXX-- 189
           TPKL SL           T+N SS   +   QIKSHLNSG++N                 
Sbjct: 13  TPKLFSLLHNLALLSPSSTSNLSSPKAKADDQIKSHLNSGNINAAISLLKTPSFDPPSTL 72

Query: 190 ----------KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFD 339
                     KSR FD   SL  SMR +GVAPDVVTL+I+L+C+  C+ GR+++AR +FD
Sbjct: 73  FFNRVLSSLTKSRRFDCAISLYNSMRCSGVAPDVVTLNIILDCY--CESGRVHVARQLFD 130

Query: 340 EMRAWALSPTTVSCNTLIKGYFREGLI 420
           EM    LSPTTVSCNTLIKGY R+GLI
Sbjct: 131 EMPRRELSPTTVSCNTLIKGYCRKGLI 157


>ref|XP_020573314.1| pentatricopeptide repeat-containing protein At1g62914,
           mitochondrial-like [Phalaenopsis equestris]
          Length = 628

 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 46/77 (59%), Positives = 59/77 (76%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           K R FD+  SL  SMRR+GVAPDVVTL+IL+NC+   +CGR++ AR +FDE+  W+ +PT
Sbjct: 83  KFRRFDSTISLYNSMRRSGVAPDVVTLNILINCY--AECGRVDFARKVFDEITMWSYTPT 140

Query: 370 TVSCNTLIKGYFREGLI 420
            VSCNTLIKG+ R G I
Sbjct: 141 IVSCNTLIKGFCRIGRI 157


>ref|XP_010925750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Elaeis guineensis]
 ref|XP_010925751.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Elaeis guineensis]
          Length = 649

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 43/77 (55%), Positives = 59/77 (76%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           ++R F++  SL  SMRR+GV PD+VTL+IL+NC+  C+ G L+LAR +FDE+R W+  P 
Sbjct: 86  RARRFESTVSLYHSMRRSGVPPDLVTLNILINCY--CEWGHLDLARQVFDEIRFWSYLPN 143

Query: 370 TVSCNTLIKGYFREGLI 420
            +SCNTLIKGY R+G I
Sbjct: 144 AISCNTLIKGYCRKGRI 160


>ref|XP_017696777.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Phoenix dactylifera]
          Length = 531

 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 40/63 (63%), Positives = 51/63 (80%)
 Frame = +1

Query: 232 MRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPTTVSCNTLIKGYFRE 411
           MRR+GV PDVVTL+IL+NC+  C+ G L+LAR +FDE+R W+ SP  +SCNTLIKGY R+
Sbjct: 1   MRRSGVPPDVVTLNILINCY--CEWGHLDLARQVFDEIRFWSYSPNAISCNTLIKGYCRK 58

Query: 412 GLI 420
           G I
Sbjct: 59  GRI 61


>gb|PKA54080.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 552

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 43/77 (55%), Positives = 57/77 (74%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           K R F++  SL  SMR +GVAPDVVT +IL+NC+   +CGR++LAR +FDE++  +  PT
Sbjct: 75  KFRRFESTVSLYHSMRSSGVAPDVVTFNILINCYS--ECGRVDLARQVFDEIKQSSFFPT 132

Query: 370 TVSCNTLIKGYFREGLI 420
            VSCNTLIKG+ R G I
Sbjct: 133 IVSCNTLIKGFCRIGRI 149


>ref|XP_020674218.1| pentatricopeptide repeat-containing protein At5g39710-like isoform
           X3 [Dendrobium catenatum]
          Length = 507

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           K + F +   L   MRR+GVAPDVVT +IL+NC+   +CGR++LA  +FDE+  W+ +PT
Sbjct: 83  KFKRFGSTIFLYNFMRRSGVAPDVVTFNILINCYS--ECGRVDLASKVFDEITLWSFAPT 140

Query: 370 TVSCNTLIKGYFREGLI 420
            VSCNTLIKG+ R G I
Sbjct: 141 IVSCNTLIKGFCRIGRI 157


>ref|XP_020674215.1| pentatricopeptide repeat-containing protein At5g39710-like isoform
           X2 [Dendrobium catenatum]
          Length = 608

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           K + F +   L   MRR+GVAPDVVT +IL+NC+   +CGR++LA  +FDE+  W+ +PT
Sbjct: 83  KFKRFGSTIFLYNFMRRSGVAPDVVTFNILINCYS--ECGRVDLASKVFDEITLWSFAPT 140

Query: 370 TVSCNTLIKGYFREGLI 420
            VSCNTLIKG+ R G I
Sbjct: 141 IVSCNTLIKGFCRIGRI 157


>ref|XP_020674193.1| pentatricopeptide repeat-containing protein At5g39710-like isoform
           X1 [Dendrobium catenatum]
 ref|XP_020674198.1| pentatricopeptide repeat-containing protein At5g39710-like isoform
           X1 [Dendrobium catenatum]
 ref|XP_020674207.1| pentatricopeptide repeat-containing protein At5g39710-like isoform
           X1 [Dendrobium catenatum]
 gb|PKU82946.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 628

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           K + F +   L   MRR+GVAPDVVT +IL+NC+   +CGR++LA  +FDE+  W+ +PT
Sbjct: 83  KFKRFGSTIFLYNFMRRSGVAPDVVTFNILINCYS--ECGRVDLASKVFDEITLWSFAPT 140

Query: 370 TVSCNTLIKGYFREGLI 420
            VSCNTLIKG+ R G I
Sbjct: 141 IVSCNTLIKGFCRIGRI 157


>ref|XP_018679504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
 ref|XP_018679505.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
 ref|XP_018679506.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
 ref|XP_018679508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
 ref|XP_009393730.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
          Length = 635

 Score = 80.1 bits (196), Expect = 1e-14
 Identities = 39/77 (50%), Positives = 51/77 (66%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           KSR FD    L  SM ++GV PDV+TL +L+NCH  C+ GRL+L   +FD+   W  SP 
Sbjct: 86  KSRRFDLAIPLFRSMCQSGVPPDVLTLTLLMNCH--CESGRLDLVCQVFDQFEFWKCSPN 143

Query: 370 TVSCNTLIKGYFREGLI 420
            +SCNTLIK Y ++G I
Sbjct: 144 VISCNTLIKAYCKKGRI 160


>ref|XP_020256590.1| pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Asparagus officinalis]
          Length = 529

 Score = 68.9 bits (167), Expect = 8e-11
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
 Frame = +1

Query: 52  PSLFRKFTNNFSSYHQTHHQIKSHLNSGDVNXXXXXXXXXXXXXXX-------------- 189
           PSL  +  ++F S   T   I SHLNS D +                             
Sbjct: 17  PSLSSRSLSSFPS--STASLILSHLNSNDTSAAISTLLSSLPSSTSPPPPSLLNPIFSSL 74

Query: 190 -KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSP 366
            K+  F +  SL  S+  + + PD+++ +I+LNC+  CQ  +++ A+ +FDEM  W LSP
Sbjct: 75  SKTHQFQSAISLYNSLLHHKITPDLISANIVLNCY--CQAHQIDHAQKLFDEMPQWGLSP 132

Query: 367 TTVSCNTLIKGYFREGLIG 423
             VS NTL+KGY +E  +G
Sbjct: 133 DPVSFNTLVKGYCKENRVG 151


>gb|ONK74770.1| uncharacterized protein A4U43_C03F9970 [Asparagus officinalis]
          Length = 573

 Score = 68.9 bits (167), Expect = 8e-11
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
 Frame = +1

Query: 52  PSLFRKFTNNFSSYHQTHHQIKSHLNSGDVNXXXXXXXXXXXXXXX-------------- 189
           PSL  +  ++F S   T   I SHLNS D +                             
Sbjct: 61  PSLSSRSLSSFPS--STASLILSHLNSNDTSAAISTLLSSLPSSTSPPPPSLLNPIFSSL 118

Query: 190 -KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSP 366
            K+  F +  SL  S+  + + PD+++ +I+LNC+  CQ  +++ A+ +FDEM  W LSP
Sbjct: 119 SKTHQFQSAISLYNSLLHHKITPDLISANIVLNCY--CQAHQIDHAQKLFDEMPQWGLSP 176

Query: 367 TTVSCNTLIKGYFREGLIG 423
             VS NTL+KGY +E  +G
Sbjct: 177 DPVSFNTLVKGYCKENRVG 195


>ref|XP_008803207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Phoenix dactylifera]
 ref|XP_008803208.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Phoenix dactylifera]
          Length = 552

 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
 Frame = +1

Query: 94  HQTHHQIKSHLNSGDV---------------NXXXXXXXXXXXXXXXKSRCFDTVHSLCA 228
           H+    ++SHL+SGDV               +               KSR F++V SL  
Sbjct: 37  HRLDDLLRSHLDSGDVPAAVSVLRRSFHSPLSRPPATSVNLVFAHLSKSRQFESVISLYH 96

Query: 229 SMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPTTVSCNTLIKGYFR 408
           S+R +G++ D+V+L+IL++C+  CQ  +L+LA  +FDE+R  +  P  VS NT+IKG+  
Sbjct: 97  SLRESGLSADLVSLNILIHCY--CQTRQLDLALKVFDEIRERSYRPDIVSFNTVIKGFCN 154

Query: 409 EGLI 420
           E  +
Sbjct: 155 ENRV 158


>ref|XP_010930804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial [Elaeis guineensis]
          Length = 554

 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
 Frame = +1

Query: 94  HQTHHQIKSHLNSGDVNXXXXXXXXXXXXXXX---------------KSRCFDTVHSLCA 228
           H+    ++SHL+SGDV                               KSR F++V SL  
Sbjct: 37  HRLDDLLRSHLDSGDVPAAVSLLRHSFYSPLAPPPASSVNLVFSHLSKSRQFESVISLYH 96

Query: 229 SMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPTTVSCNTLIKGYFR 408
           S+R +G + D+V+L+IL++C+  CQ  RL+ A  +FDE+R  + +P  VS NTLIKG+  
Sbjct: 97  SLRESGFSADLVSLNILIHCY--CQTRRLDFAFKVFDEIRERSYAPDVVSFNTLIKGFCN 154

Query: 409 EGLI 420
           E  +
Sbjct: 155 ENRV 158


>ref|XP_020102406.1| pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Ananas comosus]
          Length = 518

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           +SR FD    L + M R G  PD+++ +ILLNC+  C+ GR++ A  +F+EM      P 
Sbjct: 79  RSRRFDCAVDLYSFMCRVGADPDMISFNILLNCY--CETGRVDCAHKVFNEMALGFDKPN 136

Query: 370 TVSCNTLIKGYFREGLI 420
            VS NTLIKGY ++GLI
Sbjct: 137 VVSYNTLIKGYCKKGLI 153


>gb|PKA49430.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 581

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 37/77 (48%), Positives = 50/77 (64%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           KS  +D   +L  S+R   V  D+V+L+ILLNC+   Q GR +LA  +FDEMR + L+P 
Sbjct: 108 KSHHYDLAITLFHSLRTLSVPIDLVSLNILLNCYS--QTGRSSLALQLFDEMRHFGLTPD 165

Query: 370 TVSCNTLIKGYFREGLI 420
            +S NTLIKG+ RE  I
Sbjct: 166 IISFNTLIKGFCRENRI 182


>ref|XP_023513230.1| pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial [Cucurbita pepo subsp. pepo]
          Length = 531

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = +1

Query: 220 LCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPTTVSCNTLIKG 399
           L ++M RNGV PDVVT + L+N    C+ G+L  A  +F EM+A  LSPTTV+ NTLI G
Sbjct: 295 LRSTMERNGVPPDVVTFNTLIN--GFCKDGKLQEASRLFGEMKAMGLSPTTVTYNTLING 352

Query: 400 YFREG 414
           Y + G
Sbjct: 353 YSKMG 357


>ref|XP_022943886.1| pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial [Cucurbita moschata]
          Length = 531

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = +1

Query: 220 LCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPTTVSCNTLIKG 399
           L ++M RNGV PDVVT + L+N    C+ G+L  A  +F EM+A  LSPTTV+ NTLI G
Sbjct: 295 LRSTMERNGVPPDVVTFNTLIN--GFCKDGKLQEASRLFGEMKAMGLSPTTVTYNTLING 352

Query: 400 YFREG 414
           Y + G
Sbjct: 353 YSKMG 357


>gb|OVA09640.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 627

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 30/77 (38%), Positives = 53/77 (68%)
 Frame = +1

Query: 190 KSRCFDTVHSLCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPT 369
           K+  F++  SL   ++ +GV+PD++TL+ ++NC+  C+  + +LAR +FDE++A   +PT
Sbjct: 85  KANKFESTLSLYDHIKMHGVSPDLITLNTIMNCY--CETHKTDLARQVFDEIKALNFAPT 142

Query: 370 TVSCNTLIKGYFREGLI 420
            V+ NTLIKG  +E  +
Sbjct: 143 VVTFNTLIKGLCKENRV 159


>ref|XP_022985795.1| pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial [Cucurbita maxima]
          Length = 531

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 33/65 (50%), Positives = 45/65 (69%)
 Frame = +1

Query: 220 LCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPTTVSCNTLIKG 399
           L ++M RNGV PDVVT + L+N    C+ G+L  A  +F EM+A +LSPTT++ NTLI G
Sbjct: 295 LRSTMERNGVLPDVVTFNTLIN--GFCKDGKLQEASKLFGEMKAMSLSPTTITYNTLING 352

Query: 400 YFREG 414
           Y + G
Sbjct: 353 YSKMG 357


>ref|XP_022140267.1| pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial isoform X2 [Momordica charantia]
          Length = 509

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 220 LCASMRRNGVAPDVVTLDILLNCHRHCQCGRLNLARHMFDEMRAWALSPTTVSCNTLIKG 399
           L  +M +NGV PDVVT + L+N    C+ G+L  A  +F EM+  +LSPTTV+ NTLI G
Sbjct: 269 LRTAMEKNGVPPDVVTFNTLIN--GFCKDGKLQEASKLFGEMKVMSLSPTTVTYNTLING 326

Query: 400 YFREG 414
           Y + G
Sbjct: 327 YSKVG 331