BLASTX nr result

ID: Ophiopogon23_contig00038913 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00038913
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268866.1| uncharacterized protein LOC109844293 isoform...   107   2e-24
ref|XP_020268868.1| uncharacterized protein LOC109844293 isoform...   105   1e-23
ref|XP_019710569.1| PREDICTED: uncharacterized protein LOC105058...    70   3e-11
ref|XP_010940095.1| PREDICTED: uncharacterized protein LOC105058...    70   3e-11
gb|OAY85814.1| Replication factor C subunit 3 [Ananas comosus]         68   1e-10
ref|XP_020097378.1| uncharacterized protein LOC109716384 [Ananas...    68   1e-10
ref|XP_008795941.1| PREDICTED: uncharacterized protein LOC103711...    67   3e-10
gb|AQK54573.1| Replication factor C subunit 3, partial [Zea mays]      54   1e-06
gb|AQK54578.1| Replication factor C subunit 3 [Zea mays]               54   7e-06
ref|XP_020408265.1| uncharacterized protein LOC103653964 isoform...    54   8e-06
ref|XP_008679013.1| uncharacterized protein LOC103653964 isoform...    54   8e-06
ref|XP_008679011.1| uncharacterized protein LOC103653964 isoform...    54   8e-06

>ref|XP_020268866.1| uncharacterized protein LOC109844293 isoform X1 [Asparagus
           officinalis]
 gb|ONK66317.1| uncharacterized protein A4U43_C06F6440 [Asparagus officinalis]
          Length = 848

 Score =  107 bits (267), Expect = 2e-24
 Identities = 59/98 (60%), Positives = 67/98 (68%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 KGDAFWPFRRLLRS---PHVISYAT*NGGFL-KTXSRHKRSGYEPSDTETEWQEQESPWH 116
           K + FW     LR+   P + + +  NG  L +  SRHKRSGYEPSDTETEWQE  SPWH
Sbjct: 14  KSERFWLISWSLRTKMAPAMGNPSRPNGSSLIRPSSRHKRSGYEPSDTETEWQE--SPWH 71

Query: 115 GGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTISPLN 2
            GLLVSNRSKTPNP R  N ISNRS+TP PTR  +P N
Sbjct: 72  DGLLVSNRSKTPNPARIDNPISNRSQTPDPTRATAPSN 109


>ref|XP_020268868.1| uncharacterized protein LOC109844293 isoform X2 [Asparagus
           officinalis]
          Length = 820

 Score =  105 bits (261), Expect = 1e-23
 Identities = 50/67 (74%), Positives = 54/67 (80%)
 Frame = -1

Query: 202 LKTXSRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPT 23
           ++  SRHKRSGYEPSDTETEWQE  SPWH GLLVSNRSKTPNP R  N ISNRS+TP PT
Sbjct: 17  IRPSSRHKRSGYEPSDTETEWQE--SPWHDGLLVSNRSKTPNPARIDNPISNRSQTPDPT 74

Query: 22  RTISPLN 2
           R  +P N
Sbjct: 75  RATAPSN 81


>ref|XP_019710569.1| PREDICTED: uncharacterized protein LOC105058758 isoform X2 [Elaeis
           guineensis]
          Length = 739

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 35/62 (56%), Positives = 39/62 (62%)
 Frame = -1

Query: 187 RHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTISP 8
           RH+RSGYEPSDTETEW  Q+SPWH GL + NR +TP               PGP R ISP
Sbjct: 21  RHRRSGYEPSDTETEW--QDSPWHEGLSIPNRPRTP---------------PGPERAISP 63

Query: 7   LN 2
           LN
Sbjct: 64  LN 65


>ref|XP_010940095.1| PREDICTED: uncharacterized protein LOC105058758 isoform X1 [Elaeis
           guineensis]
 ref|XP_019710567.1| PREDICTED: uncharacterized protein LOC105058758 isoform X1 [Elaeis
           guineensis]
 ref|XP_019710568.1| PREDICTED: uncharacterized protein LOC105058758 isoform X1 [Elaeis
           guineensis]
          Length = 787

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 35/62 (56%), Positives = 39/62 (62%)
 Frame = -1

Query: 187 RHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTISP 8
           RH+RSGYEPSDTETEW  Q+SPWH GL + NR +TP               PGP R ISP
Sbjct: 21  RHRRSGYEPSDTETEW--QDSPWHEGLSIPNRPRTP---------------PGPERAISP 63

Query: 7   LN 2
           LN
Sbjct: 64  LN 65


>gb|OAY85814.1| Replication factor C subunit 3 [Ananas comosus]
          Length = 742

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 37/66 (56%), Positives = 39/66 (59%)
 Frame = -1

Query: 199 KTXSRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTR 20
           K     +RSGYEPSDTETEW  QESPWH G L SNR KTP                GP+R
Sbjct: 13  KPPPSRRRSGYEPSDTETEW--QESPWHEGPLTSNRPKTPT---------------GPSR 55

Query: 19  TISPLN 2
           TISPLN
Sbjct: 56  TISPLN 61


>ref|XP_020097378.1| uncharacterized protein LOC109716384 [Ananas comosus]
          Length = 756

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 37/66 (56%), Positives = 39/66 (59%)
 Frame = -1

Query: 199 KTXSRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTR 20
           K     +RSGYEPSDTETEW  QESPWH G L SNR KTP                GP+R
Sbjct: 13  KPPPSRRRSGYEPSDTETEW--QESPWHEGPLTSNRPKTPT---------------GPSR 55

Query: 19  TISPLN 2
           TISPLN
Sbjct: 56  TISPLN 61


>ref|XP_008795941.1| PREDICTED: uncharacterized protein LOC103711542 [Phoenix
           dactylifera]
 ref|XP_008795942.1| PREDICTED: uncharacterized protein LOC103711542 [Phoenix
           dactylifera]
          Length = 764

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -1

Query: 199 KTXSRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTR 20
           ++ S+ +RSGYEPSDTET+W  QESPW+ GL +SNR +TP               PGP R
Sbjct: 17  QSSSKQRRSGYEPSDTETDW--QESPWNEGLSISNRPRTP---------------PGPAR 59

Query: 19  TISPLN 2
            ISPLN
Sbjct: 60  AISPLN 65


>gb|AQK54573.1| Replication factor C subunit 3, partial [Zea mays]
          Length = 145

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = -1

Query: 190 SRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTI 14
           ++HK SGYEPSDTETEW   ESPW+ G L SNR++ P      + +  R +   P  T+
Sbjct: 20  TKHK-SGYEPSDTETEW--HESPWNDGALASNRNRLPKDSGRNDQVGTRRQNISPNCTL 75


>gb|AQK54578.1| Replication factor C subunit 3 [Zea mays]
          Length = 444

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = -1

Query: 190 SRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTI 14
           ++HK SGYEPSDTETEW   ESPW+ G L SNR++ P      + +  R +   P  T+
Sbjct: 33  TKHK-SGYEPSDTETEW--HESPWNDGALASNRNRLPKDSGRNDQVGTRRQNISPNCTL 88


>ref|XP_020408265.1| uncharacterized protein LOC103653964 isoform X3 [Zea mays]
          Length = 693

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = -1

Query: 190 SRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTI 14
           ++HK SGYEPSDTETEW   ESPW+ G L SNR++ P      + +  R +   P  T+
Sbjct: 20  TKHK-SGYEPSDTETEW--HESPWNDGALASNRNRLPKDSGRNDQVGTRRQNISPNCTL 75


>ref|XP_008679013.1| uncharacterized protein LOC103653964 isoform X2 [Zea mays]
 ref|XP_020408262.1| uncharacterized protein LOC103653964 isoform X2 [Zea mays]
 ref|XP_020408263.1| uncharacterized protein LOC103653964 isoform X2 [Zea mays]
 ref|XP_020408264.1| uncharacterized protein LOC103653964 isoform X2 [Zea mays]
 gb|AQK54566.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54567.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54572.1| Replication factor C subunit 3 [Zea mays]
          Length = 740

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = -1

Query: 190 SRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTI 14
           ++HK SGYEPSDTETEW   ESPW+ G L SNR++ P      + +  R +   P  T+
Sbjct: 20  TKHK-SGYEPSDTETEW--HESPWNDGALASNRNRLPKDSGRNDQVGTRRQNISPNCTL 75


>ref|XP_008679011.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_008679012.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_020408254.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_020408255.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_020408256.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_020408257.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_020408258.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_020408259.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 ref|XP_020408260.1| uncharacterized protein LOC103653964 isoform X1 [Zea mays]
 gb|AQK54555.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54556.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54558.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54560.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54561.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54562.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54563.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54564.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54569.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54570.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54571.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54574.1| Replication factor C subunit 3 [Zea mays]
 gb|AQK54576.1| Replication factor C subunit 3 [Zea mays]
          Length = 741

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = -1

Query: 190 SRHKRSGYEPSDTETEWQEQESPWHGGLLVSNRSKTPNPVRTINSISNRSKTPGPTRTI 14
           ++HK SGYEPSDTETEW   ESPW+ G L SNR++ P      + +  R +   P  T+
Sbjct: 20  TKHK-SGYEPSDTETEW--HESPWNDGALASNRNRLPKDSGRNDQVGTRRQNISPNCTL 75


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