BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00038833
         (615 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241315.1| DNA mismatch repair protein MSH3 [Asparagus ...   101   4e-21
ref|XP_010934727.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    67   2e-09
ref|XP_008806883.1| PREDICTED: DNA mismatch repair protein MSH3 ...    59   1e-06

>ref|XP_020241315.1| DNA mismatch repair protein MSH3 [Asparagus officinalis]
          Length = 1094

 Score =  101 bits (251), Expect = 4e-21
 Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = +3

Query: 3    AAKMEADVSARAANQVQKLTLDT--QLELLRDCSSQPSSSLTENKQFEEFAMSFHKVLSY 176
            AAK+EADV+    ++V+KL LD   + + L +CSSQPSSSL EN+QFEEF +SFHKVLS 
Sbjct: 1003 AAKLEADVNTIFLHRVRKLMLDAPKKSKELGNCSSQPSSSLVENEQFEEFTLSFHKVLSC 1062

Query: 177  IRSASSDANPLNIIGSLKDARELVLTMLK 263
            I++A SD++P N I S++DAREL LTMLK
Sbjct: 1063 IKNALSDSDPSNFISSMRDARELALTMLK 1091


>ref|XP_010934727.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
            [Elaeis guineensis]
          Length = 1115

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/83 (44%), Positives = 50/83 (60%)
 Frame = +3

Query: 3    AAKMEADVSARAANQVQKLTLDTQLELLRDCSSQPSSSLTENKQFEEFAMSFHKVLSYIR 182
            AAK+EA++S R  N  Q + +  Q E  R+ S     S +E  +FE F    H +LS I+
Sbjct: 1016 AAKLEAELSERVGNGAQNIEMPAQNERGRNYSKSTGFSYSEYDRFENFGEVCHNLLSCIK 1075

Query: 183  SASSDANPLNIIGSLKDARELVL 251
            SA  DA P+NI+ +LKDAREL L
Sbjct: 1076 SALDDAEPMNILYALKDARELAL 1098


>ref|XP_008806883.1| PREDICTED: DNA mismatch repair protein MSH3 [Phoenix dactylifera]
          Length = 1033

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3    AAKMEADVSARAANQVQK-LTLDTQLELLRDCSSQPSSSLTENKQFEEFAMSFHKVLSYI 179
            AAK+EA+VS    N  +      TQ E+ R+ S+    S  E+ ++E+     H +LS I
Sbjct: 945  AAKLEAEVSEWVGNGARNPKETPTQNEVGRNYSNSTGFSFREHDRYEKLGEVCHNLLSCI 1004

Query: 180  RSASSDANPLNIIGSLKDARELVLTML 260
            +SA  DA P NI+ +LKDAREL L M+
Sbjct: 1005 KSALDDAEPTNILHTLKDARELALKMI 1031