BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00038812
         (584 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]           82   7e-19
gb|OTF91393.1| putative ribonuclease H-like domain, GAG-pre-inte...    90   2e-18
gb|KOM57411.1| hypothetical protein LR48_Vigan11g044400 [Vigna a...    87   8e-18
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo...    79   9e-18
gb|OTG31811.1| putative retrovirus-related Pol polyprotein from ...    90   2e-17
gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposo...    89   2e-17
ref|XP_012836332.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...    90   2e-17
gb|ADG59810.1| gag-pol polyprotein, partial [Fraxinus excelsior]       86   3e-17
gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposo...    89   4e-17
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               89   5e-17
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo...    87   6e-17
gb|PRQ41023.1| putative RNA-directed DNA polymerase [Rosa chinen...    87   7e-17
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]    87   8e-17
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo...    88   9e-17
emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]    88   9e-17
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo...    88   9e-17
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               88   9e-17
emb|CAN82357.1| hypothetical protein VITISV_005778 [Vitis vinifera]    88   1e-16
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               88   1e-16
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               88   1e-16

>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score = 81.6 bits (200), Expect(2) = 7e-19
 Identities = 41/102 (40%), Positives = 65/102 (63%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           S+ +  +QN VAE +N +LT+R   LQL+A +S  FW  T++ ACYLIN SP   ++ ++
Sbjct: 493 SVRKTPQQNGVAERMNMSLTERARCLQLKAGLSKGFWAETINMACYLINRSPRASLEGKV 552

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKCL 270
            E +W G+  +   LRIFG   +  + S  ++KL+ KS+KC+
Sbjct: 553 AEEVWTGKPIDLDNLRIFGCPTFVHISSEDRSKLDPKSKKCI 594



 Score = 40.0 bits (92), Expect(2) = 7e-19
 Identities = 22/73 (30%), Positives = 40/73 (54%)
 Frame = -2

Query: 286 NQESVFIGFNKSKNTVF*I*RVKEYRLLNPKMKNAIVNRDVVFDEDVMFQKGSEMENKME 107
           +++ +F+G++K          VK ++L +P  K  +++RDVVFDE  M      ++   E
Sbjct: 590 SKKCIFVGYSKG---------VKGFKLWDPVSKKMVLSRDVVFDEQFM------LKQSRE 634

Query: 106 GEVTDNSANSQSK 68
            EVT+++  S  K
Sbjct: 635 TEVTESAGGSSGK 647


>gb|OTF91393.1| putative ribonuclease H-like domain, GAG-pre-integrase domain
           protein [Helianthus annuus]
          Length = 257

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 42/101 (41%), Positives = 68/101 (67%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           ++P   ++N VAE +N+TL +R  S++L A M    W   +S A YLIN SP+ P+D ++
Sbjct: 142 TVPGTPQRNGVAERMNRTLNERARSMRLNAGMPKTLWADAVSTAAYLINRSPTGPLDFKL 201

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G+  +   LR+FG SAY+L+++  ++KL+ KS+KC
Sbjct: 202 PEEMWKGKEVSLEHLRVFGCSAYDLLEAGDRDKLDSKSKKC 242


>gb|KOM57411.1| hypothetical protein LR48_Vigan11g044400 [Vigna angularis]
          Length = 179

 Score = 86.7 bits (213), Expect = 8e-18
 Identities = 41/101 (40%), Positives = 64/101 (63%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           ++P   + N VAE +N+TLT+R  S+++Q+ +   FW   ++ A YLIN SPS P++ +I
Sbjct: 40  TVPSTPQHNGVAERMNRTLTERAKSMRVQSGLPKQFWAEAVNTAAYLINRSPSVPLEHKI 99

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G+      LR+FG  AY  +    +NKL+ KS+KC
Sbjct: 100 PEEVWSGKEVKLSHLRVFGCVAYVHISDQVRNKLDPKSKKC 140


>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score = 79.0 bits (193), Expect(2) = 9e-18
 Identities = 44/104 (42%), Positives = 63/104 (60%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +R   L   A +S  FW   +S  CYLIN SPST ID 
Sbjct: 194 QYTVRNTPQQNGVAERMNRTLLERARCLLSNAGLSRSFWAEAVSTTCYLINRSPSTIIDC 253

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKCL 270
           + P  +W  + AN+ +LR+FG +AY  V+   + KLE +S+K L
Sbjct: 254 KTPIEVWSNKPANYSLLRVFGCNAYYHVN---EGKLEPRSKKGL 294



 Score = 38.9 bits (89), Expect(2) = 9e-18
 Identities = 23/68 (33%), Positives = 34/68 (50%)
 Frame = -2

Query: 223 VKEYRLLNPKMKNAIVNRDVVFDEDVMFQKGSEMENKMEGEVTDNSANSQSKVKFVEDSK 44
           VK YR+ +P  +  I++RDV+FDE  +F    E            S  +Q  +K VED K
Sbjct: 302 VKGYRIWSPAERKVILSRDVIFDESHLFYPSLEF---------TVSGKNQKILKQVEDGK 352

Query: 43  IPGRSIEE 20
             G  ++E
Sbjct: 353 TSGSILDE 360


>gb|OTG31811.1| putative retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Helianthus annuus]
          Length = 1307

 Score = 90.1 bits (222), Expect = 2e-17
 Identities = 43/101 (42%), Positives = 66/101 (65%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           ++P   +QN VAE +N+TL +R  S++L A M   FW   ++ A YLIN SPS P+  ++
Sbjct: 558 TVPGTPQQNGVAERMNRTLNERARSMRLNAGMPKTFWADAVNTAAYLINRSPSVPLGFKL 617

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G   +   LR+FG SAY+L++   ++KL+ KS+KC
Sbjct: 618 PEEMWQGNEVSLEHLRVFGCSAYDLLEVGDRDKLDSKSKKC 658


>gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 864

 Score = 88.6 bits (218), Expect(2) = 2e-17
 Identities = 42/101 (41%), Positives = 65/101 (64%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           ++P   +QN VAE +N+TLT+R  S+++Q+ +   FW  T++ A YLIN  PS P++ +I
Sbjct: 541 TVPGTPQQNGVAERMNRTLTERARSMRVQSGLPKQFWAETVNTAAYLINRGPSVPLEHKI 600

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G+      LR+FG  AY  +    +NKL+ KS+KC
Sbjct: 601 PEEVWSGKEVKLSHLRVFGCVAYVHISDQGRNKLDPKSKKC 641



 Score = 28.1 bits (61), Expect(2) = 2e-17
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -2

Query: 214 YRLLNPKMKNAIVNRDVVFDEDVMFQ 137
           YRL + + K  I +RDV+F+E VM++
Sbjct: 653 YRLWDDENKKMIRSRDVIFNEGVMYK 678


>ref|XP_012836332.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Erythranthe guttata]
          Length = 755

 Score = 89.7 bits (221), Expect(2) = 2e-17
 Identities = 42/101 (41%), Positives = 65/101 (64%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           S+P  S+QN VAE +N+TLT+R  S+++Q+ +   FW   ++ A YLIN  PS P++ QI
Sbjct: 443 SVPGTSQQNAVAERMNRTLTERARSMRMQSGLPKSFWGEAVNTAAYLINRGPSVPLEYQI 502

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G+       ++FG +AY  +    +NKL+ KS+KC
Sbjct: 503 PEEVWSGKDVKLSHFKVFGCTAYVHISDQGRNKLDPKSKKC 543



 Score = 26.9 bits (58), Expect(2) = 2e-17
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -2

Query: 214 YRLLNPKMKNAIVNRDVVFDEDVMFQ 137
           YR+ + + K  I +RDV+F+E +M++
Sbjct: 555 YRIWDDESKKIIRSRDVIFNEAIMYK 580


>gb|ADG59810.1| gag-pol polyprotein, partial [Fraxinus excelsior]
          Length = 188

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 43/104 (41%), Positives = 65/104 (62%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           QL++    +QN VAE +N+TL +RT ++     M+  FW   +  ACY+IN SPST IDL
Sbjct: 67  QLTVAYTPQQNGVAERMNRTLLERTRAMLRTTGMTKSFWAEAVKTACYVINQSPSTAIDL 126

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKCL 270
           + P  +W G+  N+  L  FGS  Y + ++ + +KL+ KSRKC+
Sbjct: 127 KTPIEMWTGKPTNYSHLHTFGSPVYVMYNAQETSKLDPKSRKCI 170


>gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1291

 Score = 89.4 bits (220), Expect = 4e-17
 Identities = 42/101 (41%), Positives = 65/101 (64%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           +IP   EQN VAE +N+TL +R   +++Q+ +   FW   ++ A YLIN  PS P+  Q+
Sbjct: 546 TIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKVFWADAINTAAYLINRGPSVPLGYQL 605

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G+  N   LR+FG  +Y L+DS  ++KL+ K++KC
Sbjct: 606 PEEVWSGKEVNLSHLRVFGCVSYVLIDSDSRDKLDPKAKKC 646


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 89.0 bits (219), Expect = 5e-17
 Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +RT ++   A+M+  FW   +  ACY+IN SPST IDL
Sbjct: 572 QFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSPSTTIDL 631

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC--LHWIQQVKEYCLLNL 228
           + P  +W G+  ++  L +FG   Y + +S ++ KL+ KSRKC  L +   VK Y L + 
Sbjct: 632 KTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDP 691

Query: 227 KSQRI 213
            ++++
Sbjct: 692 TARKV 696


>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1269

 Score = 87.0 bits (214), Expect(2) = 6e-17
 Identities = 41/101 (40%), Positives = 64/101 (63%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           ++P   +QN VAE +N+TLT+R  S+++Q+ +   FW   ++ A YLIN  PS P++ +I
Sbjct: 541 TVPGTPQQNGVAERMNRTLTERARSMRMQSGLPKQFWAEAVNTAAYLINRGPSVPLEHKI 600

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G+      LR+FG  AY  +    +NKL+ KS+KC
Sbjct: 601 PEEVWSGKEVKLSHLRVFGCVAYVHISDQGRNKLDPKSKKC 641



 Score = 28.1 bits (61), Expect(2) = 6e-17
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -2

Query: 214 YRLLNPKMKNAIVNRDVVFDEDVMFQ 137
           YRL + + K  I +RDV+F+E VM++
Sbjct: 653 YRLWDDENKKMIRSRDVIFNEGVMYK 678


>gb|PRQ41023.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 306

 Score = 86.7 bits (213), Expect = 7e-17
 Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +RT ++   A+M+  FW   +   CY+IN SPST IDL
Sbjct: 149 QFTVAYTPQQNGVAERMNRTLLERTRAMLRTAEMAKSFWAEAVKTTCYVINQSPSTAIDL 208

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC--LHWIQQVKEYCLLNL 228
           + P  +W G+ A++  L  FGS  Y + ++ + +KL+ KSRKC  L +   VK Y L + 
Sbjct: 209 KTPMEMWTGKPADYSRLHTFGSPVYVMYNAQETSKLDPKSRKCIFLGYADGVKGYSLWDP 268

Query: 227 KSQRI 213
            + ++
Sbjct: 269 TAHKV 273


>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
          Length = 1286

 Score = 87.0 bits (214), Expect(2) = 8e-17
 Identities = 41/101 (40%), Positives = 64/101 (63%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           +IP   +QN VAE +N+TL +R  S++L A +   FW   +S A YLIN  PS P++ ++
Sbjct: 553 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRL 612

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           PE +W G+   F  L++FG  +Y  +DS  ++KL+ KS+ C
Sbjct: 613 PEEVWSGKEVKFSHLKVFGCISYVYIDSDARSKLDAKSKIC 653



 Score = 27.7 bits (60), Expect(2) = 8e-17
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = -2

Query: 214 YRLLNPKMKNAIVNRDVVFDEDVMFQKGSEMENKMEGEVTDNSANSQSKVKFVEDSKIPG 35
           YR  + + +  I +R+V+F+E VM++  S +       V+D +   Q K +FV   ++  
Sbjct: 665 YRFWDKQNRKIIRSRNVIFNEQVMYKDRSSV-------VSDVTEIDQKKSEFVNLDELTE 717

Query: 34  RSIEE 20
            ++++
Sbjct: 718 STVQK 722


>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1256

 Score = 88.2 bits (217), Expect = 9e-17
 Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +RT ++   A ++  FW   +  ACYLIN SPST I L
Sbjct: 522 QFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGL 581

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC--LHWIQQVKEYCLLNL 228
           + P  +W G+ +N+  L +FG   Y + +S ++ KL+ KSRKC  L +   VK Y L + 
Sbjct: 582 KTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDP 641

Query: 227 KSQRI 213
            ++++
Sbjct: 642 TARKV 646


>emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
          Length = 1269

 Score = 88.2 bits (217), Expect = 9e-17
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q +IP   +QN VAE +N+TL +R  S++L A +   FW   +S A YLIN  PS P++ 
Sbjct: 552 QKTIPXTPQQNGVAERMNRTLNERAXSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEF 611

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           ++PE +W G+   F  L++FG  +Y  +DS  ++KL+ KS+ C
Sbjct: 612 RLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKIC 654


>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score = 88.2 bits (217), Expect = 9e-17
 Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +RT ++   A ++  FW   +  ACYLIN SPST I L
Sbjct: 571 QFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGL 630

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC--LHWIQQVKEYCLLNL 228
           + P  +W G+ +N+  L +FG   Y + +S ++ KL+ KSRKC  L +   VK Y L + 
Sbjct: 631 KTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDP 690

Query: 227 KSQRI 213
            ++++
Sbjct: 691 TARKV 695


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 88.2 bits (217), Expect = 9e-17
 Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +RT ++   A M+  FW      ACY+IN SPST IDL
Sbjct: 572 QFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDL 631

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC--LHWIQQVKEYCLLNL 228
           + P  +W G+  ++  L +FG   Y + +S +K KL+ KSRKC  L +   VK Y L + 
Sbjct: 632 KTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDP 691

Query: 227 KSQRI 213
            ++++
Sbjct: 692 TARKV 696


>emb|CAN82357.1| hypothetical protein VITISV_005778 [Vitis vinifera]
          Length = 1024

 Score = 87.8 bits (216), Expect = 1e-16
 Identities = 42/101 (41%), Positives = 65/101 (64%)
 Frame = -1

Query: 575 SIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDLQI 396
           +IPR  +QN VAE +NKTL +R  S++L A +   FW   +S A YLIN  PS P++ ++
Sbjct: 438 TIPRTPQQNGVAERMNKTLNERARSMRLHAGLPKTFWADAVSTATYLINQGPSDPMEFRL 497

Query: 395 PE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC 273
           P+ +W G+   F  L++FG  +Y  +DS  ++KL+ KS+ C
Sbjct: 498 PDEVWSGKEVKFSHLKVFGYVSYVHIDSDARSKLDAKSKIC 538


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 87.8 bits (216), Expect = 1e-16
 Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +RT ++   A M+  FW   +  ACY+IN SPST IDL
Sbjct: 572 QFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDL 631

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC--LHWIQQVKEYCLLNL 228
           + P  +W G+  ++  L +FG   Y + +S ++ KL+ KSRKC  L +   VK Y L + 
Sbjct: 632 KTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDP 691

Query: 227 KSQRI 213
            ++++
Sbjct: 692 TARKV 696


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 87.8 bits (216), Expect = 1e-16
 Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
 Frame = -1

Query: 581 QLSIPRRSEQNWVAECINKTLTKRTGSLQLQADMSDDFWT*TMSHACYLINISPSTPIDL 402
           Q ++    +QN VAE +N+TL +RT ++   A M+  FW   +  ACY+IN SPST IDL
Sbjct: 572 QFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDL 631

Query: 401 QIPE*IWCGESANFYILRIFGSSAYNLVDS*KKNKLEFKSRKC--LHWIQQVKEYCLLNL 228
           + P  +W G+  ++  L +FG   Y + +S ++ KL+ KSRKC  L +   VK Y L + 
Sbjct: 632 KTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDP 691

Query: 227 KSQRI 213
            ++++
Sbjct: 692 TARKV 696