BLASTX nr result

ID: Ophiopogon23_contig00038788 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00038788
         (572 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KUM45861.1| hypothetical protein ABT39_MTgene2215 (mitochondr...    70   8e-13
gb|KUM45860.1| hypothetical protein ABT39_MTgene2214 (mitochondr...    66   5e-11

>gb|KUM45861.1| hypothetical protein ABT39_MTgene2215 (mitochondrion) [Picea
           glauca]
          Length = 46

 Score = 69.7 bits (169), Expect = 8e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -2

Query: 112 MHGRIGVADQEPADQSQTAVTLSHPGTTRRGPGISAP 2
           MH +I VADQEPADQSQTAV LSHPGTTRRGPGISAP
Sbjct: 1   MHRKIEVADQEPADQSQTAVRLSHPGTTRRGPGISAP 37


>gb|KUM45860.1| hypothetical protein ABT39_MTgene2214 (mitochondrion) [Picea
           glauca]
          Length = 79

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 33/52 (63%), Positives = 37/52 (71%)
 Frame = +1

Query: 202 MHLTDREDYVEWYASVSTGPILPPHMRIGSVLNLNFRIVRSSLSCYITRRER 357
           MHLTDREDYVEW ASVSTGPILPPHMRIGS    N+ I     + +I +  R
Sbjct: 1   MHLTDREDYVEWSASVSTGPILPPHMRIGS----NYAIRGGQAASWIAKLRR 48


Top